CuGenDBv2

Gene ID	Sed0014520
Organism	Sechium edule (Chayote v1)
Description	zinc finger CCCH domain-containing protein 40-like isoform X1
Genome location	LG05:33308283..33316012
RNA-Seq Expression	Sed0014520
Synteny	Sed0014520
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000571 - Zinc finger, CCCH-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022136017.1 zinc finger CCCH domain-containing protein 13 [Momordica charantia]

2.5e-169

79.36

Show/hide

Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF-------SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEH
        MM+G KLFKTKLCVLYQKGRCSRPSCSFAHG+AELR F       +G REYRG+DLRHKLD+R  P+QERDSRGRHGPRE+SSSWSLER SDRKRRKKEH
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF-------SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEH

Query:  GVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVK
        G S NDYSG+LRISDR  ERDREGKI+SS SRD LE QLNKMQADIEMAEHHKHQAEVYL+EKIQEVDSLTSRIQELESQLY E+E+C+RIKSKIKKFVK
Subjt:  GVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVK

Query:  AHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSR
        AHNR+++IQDELKRS+ R Q LGDQL SDV+KIGANEEDSSINIVSDGEDPG+HAASP   LQ D S+SKKK+HV+QDIAENSKQADL K SKEAV+R +
Subjt:  AHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSR

Query:  RLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTSTS--AADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLP
        R SRWNAH AQS+YSK+E VG++ +DLIPTAN S+QKRGKTS+S   ADK+RGL+SGVVVPLTSMAAHAVDE+VD ELEVNN++NE R ++K+ ASGSLP
Subjt:  RLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTSTS--AADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLP

Query:  FLPPPPP
        FLPPPPP
Subjt:  FLPPPPP

XP_022930759.1 zinc finger CCCH domain-containing protein 40-like isoform X2 [Cucurbita moschata]

8.8e-175

83.5

Show/hide

Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS
        M++G+KLFKTKLCVLYQKGRCSRPSCSFAHG AELR F+    G REYRGNDLRHKLDSR  P+QERDSRGRHGPR++SSSWSLER SDRKRRKKE+G S
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS

Query:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN
         NDYSGNLRISDR +ERDREGKISS+ SRDTLE QLNKMQADIEMAEHHKHQAEVYLDE+IQEVDSLTSRIQELESQLY E+ED RRIKSKIKKFVKAHN
Subjt:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN

Query:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS
        R+S+IQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHA SPLH LQ D SASKKK H+VQDIA NSK+ADLNK SKEAV R RR S
Subjt:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS

Query:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP
        RWNAH +QS+YSK+EAVG+E +DLIPTAN S+QKRG+TST  S+ADKVRGL+SGVVVPLTSMAAHAVDEEVD ELE+N+K+NE RE+TK+A+ GSLPF P
Subjt:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP

Query:  PPPPIR
        PPPPIR
Subjt:  PPPPIR

XP_022988786.1 zinc finger CCCH domain-containing protein 40-like isoform X1 [Cucurbita maxima]

1.5e-174

83.91

Show/hide

Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS
        M++G+KLFKTKLCVLYQKGRCSRPSCSFAHG AELR F+    G REYRGNDLRHKLDSR  P+QERDSRGRHGPR++SSSWSLER SDRKRRKKE+G S
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS

Query:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN
         NDYSGNLRISDR +ERDREGKISS+ SRDTLE QLNKMQADIEMAEHHKHQAEVYLDE+IQEVDSLTSRIQELESQLY E+ED RRIKSKIKKFVKAHN
Subjt:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN

Query:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS
        R+S+IQDELKRSQ RLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHA SPLH LQ D SASKKK HVVQDIAENSK+ADLNK SKEAV R RR S
Subjt:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS

Query:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP
        RWNAH +QS+YSK+EAVG+E +DLIPTAN S+QKRG+TST  S+ADKVRGL+SGVVVPLTSMAAHAVDEEVD ELE+NNK+NE RE+TK+A+ GSLPF P
Subjt:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP

Query:  PPPP
        PPPP
Subjt:  PPPP

XP_023530203.1 zinc finger CCCH domain-containing protein 40-like isoform X4 [Cucurbita pepo subsp. pepo]

6.3e-173

83.25

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Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS
        M++G+KLFKTKLCVLYQKGRCSRPSCSFAHG AELR F+    G REYRGNDLRHKLDSR  P+QERDSRGRHGPR++SSSWSLER SDRKRRKKE+G S
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS

Query:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN
         NDYSGNLRISDR +ERDREGKISS+ SRDTLE QLNKMQADIEMAEHHKHQAEVYLDE+IQEVDSLTSRIQELESQLY E+ED RRIKSKIKKFVKAHN
Subjt:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN

Query:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS
        R+S+IQDELKRSQVRL+QLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHA SPLH LQ D SASKKK H+VQDIAENSK+ADLNK SKEAV R RR S
Subjt:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS

Query:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP
        RWNAH +QS+YSK+EAVG+E + LIPTAN S+QKRG+TST  S+ADKVRGL+SG VVPLTSMAAHAVDEEVD EL+VNNK+NE RE+TK+A+ GSLPF P
Subjt:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP

Query:  PPPPIR
        PPPPIR
Subjt:  PPPPIR

XP_038887776.1 zinc finger CCCH domain-containing protein 40 isoform X1 [Benincasa hispida]

1.0e-167

80.2

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Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF----SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS
        MM+G KLFKTKLCVLYQKG CSRPSCSFAHG AELR F    +G ++YRGNDLR KLDSR  P+QERDSRGRH PRE+SSSWS+ER SDRKRRKKEHG S
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF----SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS

Query:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN
         +DYSGNLRISDR +E+DR+GKISS+ SRDTLE QLNKMQ+DI+MAEHHKHQAEVYLDEKIQEVD LTSRIQELESQLY E+++CRRIKSKIKKFVKAHN
Subjt:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN

Query:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS
        R S++QDELKRSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDGEDP +HA+ P H LQ DTSASK+K+H VQD AENSK+ADLNK +KEAV R  R+S
Subjt:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS

Query:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP
        RWNAH A+S+YSK+EAVG+E +DLIPTAN SRQKRGKTS+  SAADKVRGL+SGVVVPLTSMAAHAVDEEVD +LE++N++ EPRESTK+AASGSLPFLP
Subjt:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP

Query:  PPPP
        PPPP
Subjt:  PPPP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C4D9 zinc finger CCCH domain-containing protein 13

1.2e-169

79.36

Show/hide

Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF-------SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEH
        MM+G KLFKTKLCVLYQKGRCSRPSCSFAHG+AELR F       +G REYRG+DLRHKLD+R  P+QERDSRGRHGPRE+SSSWSLER SDRKRRKKEH
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF-------SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEH

Query:  GVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVK
        G S NDYSG+LRISDR  ERDREGKI+SS SRD LE QLNKMQADIEMAEHHKHQAEVYL+EKIQEVDSLTSRIQELESQLY E+E+C+RIKSKIKKFVK
Subjt:  GVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVK

Query:  AHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSR
        AHNR+++IQDELKRS+ R Q LGDQL SDV+KIGANEEDSSINIVSDGEDPG+HAASP   LQ D S+SKKK+HV+QDIAENSKQADL K SKEAV+R +
Subjt:  AHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSR

Query:  RLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTSTS--AADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLP
        R SRWNAH AQS+YSK+E VG++ +DLIPTAN S+QKRGKTS+S   ADK+RGL+SGVVVPLTSMAAHAVDE+VD ELEVNN++NE R ++K+ ASGSLP
Subjt:  RLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTSTS--AADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLP

Query:  FLPPPPP
        FLPPPPP
Subjt:  FLPPPPP

A0A6J1ESE6 zinc finger CCCH domain-containing protein 40-like isoform X2

4.3e-175

83.5

Show/hide

Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS
        M++G+KLFKTKLCVLYQKGRCSRPSCSFAHG AELR F+    G REYRGNDLRHKLDSR  P+QERDSRGRHGPR++SSSWSLER SDRKRRKKE+G S
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS

Query:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN
         NDYSGNLRISDR +ERDREGKISS+ SRDTLE QLNKMQADIEMAEHHKHQAEVYLDE+IQEVDSLTSRIQELESQLY E+ED RRIKSKIKKFVKAHN
Subjt:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN

Query:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS
        R+S+IQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHA SPLH LQ D SASKKK H+VQDIA NSK+ADLNK SKEAV R RR S
Subjt:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS

Query:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP
        RWNAH +QS+YSK+EAVG+E +DLIPTAN S+QKRG+TST  S+ADKVRGL+SGVVVPLTSMAAHAVDEEVD ELE+N+K+NE RE+TK+A+ GSLPF P
Subjt:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP

Query:  PPPPIR
        PPPPIR
Subjt:  PPPPIR

A0A6J1GKR3 zinc finger CCCH domain-containing protein 13-like isoform X1

4.7e-166

80.6

Show/hide

Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF----SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS
        MMIG KLFKTKLCVLYQKG CSRPSCSFAHG AELR F    SG +EYR NDLRHKLD+R  P+QERDSRGRHGPRE+SSSWSLER SD KRRKK+HG S
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF----SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS

Query:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN
          DY+GNLRI+DR +ERDREGKISSS SRDTLE QLNKMQADIEMAEHH+HQAEVYLDEKIQEVDSLTSRIQELESQLY E+E+CRRIKSKIKKFVKAHN
Subjt:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN

Query:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS
        R+S IQDELKRSQ RLQQLGDQLGSDVNKIGANEEDSS+NIVSDGEDPG+HAA PLH L  DTSASK+K+HV QDIA NSK+ADL+K SKEAV R RR+S
Subjt:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS

Query:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGK--TSTSAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP
        RWNAH A+S+YSK+EAV +EN+D IP AN SRQKRGK   S S ADKVR LD+GVVVPLTSMAAHAV+EEVD ELEVNN++++ RESTK+AASGS P LP
Subjt:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGK--TSTSAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP

Query:  PP
        PP
Subjt:  PP

A0A6J1I1K5 zinc finger CCCH domain-containing protein 40-like isoform X1

7.3e-167

80.4

Show/hide

Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF----SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS
        MMIG KLFKTKLCVLYQKG CSRPSCSFAHG AELR F    SG +EYR NDLRHKLDSR  P+QERDSRGRHGPRE+SSSWSLER SD KRRKK+HG S
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPF----SGEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS

Query:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN
          DY+GNLRI DR +ERDREGKISSS SRDTLEEQLNKMQADIEMAEHH+HQAEVYL+EKIQEVDSLTSRIQELESQLY E+E+CRRIKSKIKKFVKAHN
Subjt:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN

Query:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS
        R+S IQDELKRSQ RLQQLGDQLGSDVNKIGANEEDSS+NIVSDGEDP +HAA PLH L  DTSASK+K+HV QDIA NSK+ADL+K SKEAV R RR+S
Subjt:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS

Query:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGK--TSTSAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP
        RWNAH A+S+YSK+EA+ +EN+D IP AN SRQKRGK   S S ADKVR LD+GVVVPLTSMAAHAV+EEVD ELEVNN++++ RESTK+AASGS+P LP
Subjt:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGK--TSTSAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP

Query:  PPP
        PPP
Subjt:  PPP

A0A6J1JI85 zinc finger CCCH domain-containing protein 40-like isoform X1

7.3e-175

83.91

Show/hide

Query:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS
        M++G+KLFKTKLCVLYQKGRCSRPSCSFAHG AELR F+    G REYRGNDLRHKLDSR  P+QERDSRGRHGPR++SSSWSLER SDRKRRKKE+G S
Subjt:  MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFS----GEREYRGNDLRHKLDSR--PIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVS

Query:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN
         NDYSGNLRISDR +ERDREGKISS+ SRDTLE QLNKMQADIEMAEHHKHQAEVYLDE+IQEVDSLTSRIQELESQLY E+ED RRIKSKIKKFVKAHN
Subjt:  VNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHN

Query:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS
        R+S+IQDELKRSQ RLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHA SPLH LQ D SASKKK HVVQDIAENSK+ADLNK SKEAV R RR S
Subjt:  RFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLS

Query:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP
        RWNAH +QS+YSK+EAVG+E +DLIPTAN S+QKRG+TST  S+ADKVRGL+SGVVVPLTSMAAHAVDEEVD ELE+NNK+NE RE+TK+A+ GSLPF P
Subjt:  RWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTST--SAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLP

Query:  PPPP
        PPPP
Subjt:  PPPP

SwissProt top hits

e value

%identity

Alignment

Q6H7U2 Zinc finger CCCH domain-containing protein 13

1.7e-40

35.25

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Query:  FKTKLCVLYQKGRCSRPSCSFAHGAAELR--PFS--------GEREYRGNDLRHKLDSR--PIQE----RDSRG-------RHGPREHSSSWSL--ERLS
        +KTKLC L+Q+G C+R +CSFAHG  ++R  P S        G R+YR  D R ++D R  P +     R+SRG       R   RE  SS+S    R S
Subjt:  FKTKLCVLYQKGRCSRPSCSFAHGAAELR--PFS--------GEREYRGNDLRHKLDSR--PIQE----RDSRG-------RHGPREHSSSWSL--ERLS

Query:  DRKRRKKEHGVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRI
        +R+  KK      N  S +L +SD   E+ ++ K SS   ++  E+QL +++ D+E     K Q EV LDEKI EV  ++S++ +LE QL  EK++C R+
Subjt:  DRKRRKKEHGVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRI

Query:  KSKIKKFVKAHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKE
         SK+KKF+KAH RF K Q+E+KRSQ R ++LGD L SD+ K GANEE SS+N   +   P   AA+    +   TS   K V   ++   +S     + +
Subjt:  KSKIKKFVKAHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKE

Query:  SKEAVARSRRLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTSTSAADKVRGLDSGVVVPLTSMAAHAVDE-----EVDTELEVNNKLNEPR
         +  V    + S+      +S+Y K +    E S L              +    +KV+G     V+P T MAAHA+D+     E++   E  + L E  
Subjt:  SKEAVARSRRLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRGKTSTSAADKVRGLDSGVVVPLTSMAAHAVDE-----EVDTELEVNNKLNEPR

Query:  ESTKDAASGSLPFLPPP
        ++     S ++P  PPP
Subjt:  ESTKDAASGSLPFLPPP

Q93XW7 Zinc finger CCCH domain-containing protein 40

1.2e-46

36.28

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Query:  MIGNKLFKTKLCVLYQK-GRCSRPSCSFAHGAAELR-----PFSGEREYRGNDL---RHKLDS--------------RPIQERDSRGRHGPREHSSSWSL
        M G+ ++KTKLC+L+ K G CSRP+C+FAHG AELR      F+G R    +DL   RH +DS              RP  +R  R       H +S   
Subjt:  MIGNKLFKTKLCVLYQK-GRCSRPSCSFAHGAAELR-----PFSGEREYRGNDL---RHKLDS--------------RPIQERDSRGRHGPREHSSSWSL

Query:  ERLSDRKRRKKEHGVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKED
        E   D+  R+        DY+G L++ +R ++R  +G+       + LEEQL  ++ D++M    K + E  ++ K  EVD LTSRIQELE+QL  EK++
Subjt:  ERLSDRKRRKKEHGVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKED

Query:  CRRIKSKIKKFVKAHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFH---AASPLHGLQIDTSASKKKVHVVQDIAENSK
        CRRI S  KKFVK +NRF + QD+LKRS+ RLQ+LG+QL + +     N  D  ++IVSD E  G +   A  P + LQ  +S S+KK +V Q   +   
Subjt:  CRRIKSKIKKFVKAHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFH---AASPLHGLQIDTSASKKKVHVVQDIAENSK

Query:  QADL--NKESKEAVARSRRLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGS----RQKRGKTSTSAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEV
        +  L    E ++     +R   WN   ++S YS+ E+    + D I  ++      +++R    TSA DK        V+  TSMAA   D+  ++E   
Subjt:  QADL--NKESKEAVARSRRLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGS----RQKRGKTSTSAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEV

Query:  NNKLNEPRESTKDAASGS-LPFLPPPPPIR
                E   +AA+GS L  LPPPPP R
Subjt:  NNKLNEPRESTKDAASGS-LPFLPPPPPIR

Arabidopsis top hits

e value

%identity

Alignment

AT3G21810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

8.8e-48

36.28

Show/hide

Query:  MIGNKLFKTKLCVLYQK-GRCSRPSCSFAHGAAELR-----PFSGEREYRGNDL---RHKLDS--------------RPIQERDSRGRHGPREHSSSWSL
        M G+ ++KTKLC+L+ K G CSRP+C+FAHG AELR      F+G R    +DL   RH +DS              RP  +R  R       H +S   
Subjt:  MIGNKLFKTKLCVLYQK-GRCSRPSCSFAHGAAELR-----PFSGEREYRGNDL---RHKLDS--------------RPIQERDSRGRHGPREHSSSWSL

Query:  ERLSDRKRRKKEHGVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKED
        E   D+  R+        DY+G L++ +R ++R  +G+       + LEEQL  ++ D++M    K + E  ++ K  EVD LTSRIQELE+QL  EK++
Subjt:  ERLSDRKRRKKEHGVSVNDYSGNLRISDRRKERDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKED

Query:  CRRIKSKIKKFVKAHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFH---AASPLHGLQIDTSASKKKVHVVQDIAENSK
        CRRI S  KKFVK +NRF + QD+LKRS+ RLQ+LG+QL + +     N  D  ++IVSD E  G +   A  P + LQ  +S S+KK +V Q   +   
Subjt:  CRRIKSKIKKFVKAHNRFSKIQDELKRSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFH---AASPLHGLQIDTSASKKKVHVVQDIAENSK

Query:  QADL--NKESKEAVARSRRLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGS----RQKRGKTSTSAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEV
        +  L    E ++     +R   WN   ++S YS+ E+    + D I  ++      +++R    TSA DK        V+  TSMAA   D+  ++E   
Subjt:  QADL--NKESKEAVARSRRLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGS----RQKRGKTSTSAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEV

Query:  NNKLNEPRESTKDAASGS-LPFLPPPPPIR
                E   +AA+GS L  LPPPPP R
Subjt:  NNKLNEPRESTKDAASGS-LPFLPPPPPIR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGATTGGGAACAAACTCTTCAAAACCAAGTTATGCGTTCTGTATCAGAAAGGGCGCTGTTCTCGCCCAAGTTGCTCCTTCGCACATGGGGCCGCTGAACTCAGGCC
ATTTTCTGGTGAGCGGGAATATAGAGGAAATGACTTGAGGCACAAACTTGATAGTAGGCCCATACAAGAAAGGGATTCCAGAGGACGACATGGACCTCGCGAACATAGCT
CCTCATGGTCTCTTGAACGACTAAGTGACCGTAAAAGAAGGAAAAAAGAACATGGGGTTTCCGTTAATGATTATTCTGGAAATTTGAGGATTTCAGATAGGCGTAAAGAA
CGAGATAGAGAAGGGAAAATCTCATCATCTGTTTCTAGGGACACTCTTGAGGAGCAGTTAAACAAGATGCAGGCAGATATTGAAATGGCTGAGCACCACAAACACCAAGC
TGAGGTCTACCTAGACGAGAAGATCCAAGAAGTGGACAGTTTAACTTCTAGAATTCAGGAGCTAGAATCTCAATTATATACAGAAAAGGAGGATTGTAGAAGGATCAAGT
CAAAAATAAAAAAATTTGTCAAAGCACATAATCGTTTCTCAAAGATACAAGATGAACTGAAGCGATCACAAGTCCGACTTCAACAATTGGGAGATCAGCTGGGGTCAGAT
GTTAATAAAATTGGTGCCAATGAAGAAGACTCAAGCATCAATATTGTGAGCGATGGAGAGGACCCTGGTTTTCATGCAGCCAGTCCTCTTCATGGCCTGCAAATAGACAC
TTCTGCAAGCAAGAAGAAGGTTCACGTTGTTCAAGATATTGCAGAGAACTCAAAACAAGCTGATTTAAACAAAGAAAGTAAAGAGGCAGTGGCCAGATCAAGAAGGTTGT
CTCGTTGGAATGCCCATCGTGCTCAATCGATATATAGCAAAGTTGAGGCGGTTGGCAGTGAAAACAGTGATTTGATACCTACAGCAAATGGAAGCAGGCAGAAGAGGGGA
AAGACATCTACTAGTGCTGCAGACAAGGTTAGGGGTCTGGATTCAGGTGTCGTAGTACCATTAACCAGCATGGCTGCCCATGCAGTTGATGAAGAAGTTGATACTGAATT
GGAAGTTAACAATAAACTGAACGAACCGAGGGAAAGTACTAAGGATGCAGCGTCGGGCAGCCTGCCTTTTCTGCCCCCTCCACCTCCTATTCGTTAA

mRNA sequence

Show/hide mRNA sequence

AGAAAACAAAAAGTTGTGGCATCGCCCGTCCCAATTTGTTGTACAGAAGTTGCATATTTTTCCGATTCTCGGCAAGCAGATTCAGCATTAAGCTCTTGAATTCGGTTCTT
CATCTATTATTTCTAGTTCTTGGGCGATTGTATGTAGAGTTGTTCTCTGTTCATGTTCATCCATGATGATTGGGAACAAACTCTTCAAAACCAAGTTATGCGTTCTGTAT
CAGAAAGGGCGCTGTTCTCGCCCAAGTTGCTCCTTCGCACATGGGGCCGCTGAACTCAGGCCATTTTCTGGTGAGCGGGAATATAGAGGAAATGACTTGAGGCACAAACT
TGATAGTAGGCCCATACAAGAAAGGGATTCCAGAGGACGACATGGACCTCGCGAACATAGCTCCTCATGGTCTCTTGAACGACTAAGTGACCGTAAAAGAAGGAAAAAAG
AACATGGGGTTTCCGTTAATGATTATTCTGGAAATTTGAGGATTTCAGATAGGCGTAAAGAACGAGATAGAGAAGGGAAAATCTCATCATCTGTTTCTAGGGACACTCTT
GAGGAGCAGTTAAACAAGATGCAGGCAGATATTGAAATGGCTGAGCACCACAAACACCAAGCTGAGGTCTACCTAGACGAGAAGATCCAAGAAGTGGACAGTTTAACTTC
TAGAATTCAGGAGCTAGAATCTCAATTATATACAGAAAAGGAGGATTGTAGAAGGATCAAGTCAAAAATAAAAAAATTTGTCAAAGCACATAATCGTTTCTCAAAGATAC
AAGATGAACTGAAGCGATCACAAGTCCGACTTCAACAATTGGGAGATCAGCTGGGGTCAGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCAAGCATCAATATTGTG
AGCGATGGAGAGGACCCTGGTTTTCATGCAGCCAGTCCTCTTCATGGCCTGCAAATAGACACTTCTGCAAGCAAGAAGAAGGTTCACGTTGTTCAAGATATTGCAGAGAA
CTCAAAACAAGCTGATTTAAACAAAGAAAGTAAAGAGGCAGTGGCCAGATCAAGAAGGTTGTCTCGTTGGAATGCCCATCGTGCTCAATCGATATATAGCAAAGTTGAGG
CGGTTGGCAGTGAAAACAGTGATTTGATACCTACAGCAAATGGAAGCAGGCAGAAGAGGGGAAAGACATCTACTAGTGCTGCAGACAAGGTTAGGGGTCTGGATTCAGGT
GTCGTAGTACCATTAACCAGCATGGCTGCCCATGCAGTTGATGAAGAAGTTGATACTGAATTGGAAGTTAACAATAAACTGAACGAACCGAGGGAAAGTACTAAGGATGC
AGCGTCGGGCAGCCTGCCTTTTCTGCCCCCTCCACCTCCTATTCGTTAAACCTACCTTTCAAGGTATGTGAGTGAAGATCAAAATGTAGATGTGGAGGGACACGATGATG
AAATGGTGTGATTGGACAGCGCTCACTTTGAATCCTGCTGTAAGGTTAAATGAATTATTAGTTCAATGAAGTTCATAGATTTGCATAGGATGGTGTCTTATGTGTTCTTG
TTTTTAACACATTTGCAATTTTCACATTTTGTGTTAAAATTTCAATTTTCTTTTTAAGGAATGAAAATTTAAGTTTTTGCTTAATATTGTCATTAAAATTGAGTATTACT
ACATTGATTCCTATCGCTTGAGTTTGATGGTAAGAGATTCATCATCATTATGAGAAATGAGTTGAGGCTAGAATTAATCCACTAATCGGTTATGG

Protein sequence

Show/hide protein sequence

MMIGNKLFKTKLCVLYQKGRCSRPSCSFAHGAAELRPFSGEREYRGNDLRHKLDSRPIQERDSRGRHGPREHSSSWSLERLSDRKRRKKEHGVSVNDYSGNLRISDRRKE
RDREGKISSSVSRDTLEEQLNKMQADIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYTEKEDCRRIKSKIKKFVKAHNRFSKIQDELKRSQVRLQQLGDQLGSD
VNKIGANEEDSSINIVSDGEDPGFHAASPLHGLQIDTSASKKKVHVVQDIAENSKQADLNKESKEAVARSRRLSRWNAHRAQSIYSKVEAVGSENSDLIPTANGSRQKRG
KTSTSAADKVRGLDSGVVVPLTSMAAHAVDEEVDTELEVNNKLNEPRESTKDAASGSLPFLPPPPPIR

Sed0014520 (gene) of Chayote v1 genome