| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032207.1 pol protein [Cucumis melo var. makuwa] | 1.6e-115 | 49.68 | Show/hide |
Query: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
GYYRRFV++FS IA PLT+LTRKG FVW C++SF LK+ L +APVL VP+G+G ++Y+DASK GLGCVLMQ GKV+AYASRQLK +EQNYPTHD+
Subjt: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
Query: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL-------------------
ELAAVVFA KIWRHYLYGE+IQ+F+DH+SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L
Subjt: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL-------------------
Query: ----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHPEQVKAPGETSPVCVG
L+ +P LR+ + RG A GQ + +R++ + + + EAH SPF+ HP VKAP + +
Subjt: ----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHPEQVKAPGETSPVCVG
Query: RLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHGVLLRIV--------STVIRGLVCWISERV---
LS+P WKWE +SMDFI+GL RT R F+ IWV+VDRLTKSA F+PG+ TYT +WAQL++ +IVR HGV + IV S +GL + R+
Subjt: RLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHGVLLRIV--------STVIRGLVCWISERV---
Query: ---------------------------------GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
+ MEFA NNSY++ I MAPFEALYGK C
Subjt: ---------------------------------GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
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| KAA0056702.1 pol protein [Cucumis melo var. makuwa] | 2.3e-117 | 49.89 | Show/hide |
Query: VGYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHD
VGYYRRFV++FS IA PLT+LTRKG FVW C++SF LK+ L +APV+ VP+G+G V+Y+DASK GLGCVLMQ GKV+AYASRQLK +EQNYPTHD
Subjt: VGYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHD
Query: MELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL------------------
+ELAAVVFA KIWRHYLYGE+IQ+F+DH+SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L
Subjt: MELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL------------------
Query: -----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP--------------
L+ +P LR+ + RG A GQ + +R + + + + EAH SPF+ HP
Subjt: -----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP--------------
Query: ------------------EQVKAPGETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYH
+QVKAP + + LS+P WKWE +SMDFI+GL RT R F+ IW +VDRLTKSAHF+PG+ TYT +WAQL++ +IVR H
Subjt: ------------------EQVKAPGETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYH
Query: GVLLRIV--------STVIRGLVCWISERV-----GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
GV + IV S +GL + ++ + MEFA NNSY++TI MAPFEALYGK C
Subjt: GVLLRIV--------STVIRGLVCWISERV-----GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
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| KAA0056806.1 pol protein [Cucumis melo var. makuwa] | 6.6e-117 | 52.71 | Show/hide |
Query: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
GYYRRFV++FS IA PLT+LTRKG FVW C++SF LK+ L +APVL +P+G+G V+Y+DASK GLGCVLMQ GKV+AYASRQLK +EQNYPTHD+
Subjt: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
Query: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRESL-------S
ELAAVVFA KIWRHYLYGE+IQ+F+DH SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L++ + L L S
Subjt: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRESL-------S
Query: G--------RGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------EQVKAPGETSPVCVGRLSVPRWKWEEISMDF
G RG A GQ + +R++ + + + EAH SPF+ HP ++VKAP + + LS+P WKWE +SMDF
Subjt: G--------RGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------EQVKAPGETSPVCVGRLSVPRWKWEEISMDF
Query: ISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQI-------------VRYHGV-------LLRIVSTVIRGLVCWISERVGTRFRSM
I+GL RT R F+ IWV+VD LTKSAHF+PG+ TYT +WAQL++ +I +H L +++ ++R + M
Subjt: ISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQI-------------VRYHGV-------LLRIVSTVIRGLVCWISERVGTRFRSM
Query: EFANNNSYRSTIQMAPFEALYGKRC
EFA NNSY++TI MAPFEALYGK C
Subjt: EFANNNSYRSTIQMAPFEALYGKRC
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| KAA0059071.1 pol protein [Cucumis melo var. makuwa] | 4.7e-115 | 48.95 | Show/hide |
Query: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
GYYRRFV++FS IA PLT+LTRKG FVW C++S LK+ L +APVL VP+G+G V+Y+DAS GLGCVLMQ GKV+AYASRQLK +EQNYPTHD+
Subjt: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
Query: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL-------------------
ELAAVVFA KIWRHYLYGE+IQ+F+DH+SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L
Subjt: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL-------------------
Query: ----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------EQVKAP
L+ +P LR+ + RG A GQ + +R++ I + + EAH SPF+ HP ++VKAP
Subjt: ----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------EQVKAP
Query: GETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHGVLLRIV--------STVIRGLVC
+ + LS+P WKWE +SMDFI+GL RT + F+ IWV+VDRLTKSAHF+PG+ TYT +WAQL++ +IVR HGV + IV S +GL
Subjt: GETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHGVLLRIV--------STVIRGLVC
Query: WISERV------------------------------------GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
+ R+ + MEFA NNSY++TI MAPFEALYGK C
Subjt: WISERV------------------------------------GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
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| KAA0063718.1 pol protein [Cucumis melo var. makuwa] | 5.6e-116 | 50.44 | Show/hide |
Query: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
GYYRRFV++FS IA PLT+LTRK FVW C++SF LK+ L +APVL VP+G+G V+Y+DASK GL CVLMQ GKV+AYASRQLK +EQNYPTHD+
Subjt: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
Query: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRESL--------
ELAAVVFA KIWRHYLYGE+IQ+F+DH+SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L++ + L L
Subjt: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRESL--------
Query: --------------------------------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------------
RG A GQ + +R++ + + + EAH SPF+ HP
Subjt: --------------------------------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------------
Query: -----------------EQVKAPGETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHG
+QVKAP + + LS+P WKWE +SMDFI+GL RT R F+ IWV+VDRLTKSAHF+PG+ TYT +WAQL++ +IVR HG
Subjt: -----------------EQVKAPGETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHG
Query: VLLRIVS-TVIRGLVCWISERVGTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
V + IVS R + + MEFA NNSY++TI MAPFEALYGK C
Subjt: VLLRIVS-TVIRGLVCWISERVGTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SS38 Pol protein | 7.9e-116 | 49.68 | Show/hide |
Query: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
GYYRRFV++FS IA PLT+LTRKG FVW C++SF LK+ L +APVL VP+G+G ++Y+DASK GLGCVLMQ GKV+AYASRQLK +EQNYPTHD+
Subjt: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
Query: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL-------------------
ELAAVVFA KIWRHYLYGE+IQ+F+DH+SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L
Subjt: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL-------------------
Query: ----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHPEQVKAPGETSPVCVG
L+ +P LR+ + RG A GQ + +R++ + + + EAH SPF+ HP VKAP + +
Subjt: ----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHPEQVKAPGETSPVCVG
Query: RLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHGVLLRIV--------STVIRGLVCWISERV---
LS+P WKWE +SMDFI+GL RT R F+ IWV+VDRLTKSA F+PG+ TYT +WAQL++ +IVR HGV + IV S +GL + R+
Subjt: RLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHGVLLRIV--------STVIRGLVCWISERV---
Query: ---------------------------------GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
+ MEFA NNSY++ I MAPFEALYGK C
Subjt: ---------------------------------GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
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| A0A5A7ULI8 Pol protein | 1.1e-117 | 49.89 | Show/hide |
Query: VGYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHD
VGYYRRFV++FS IA PLT+LTRKG FVW C++SF LK+ L +APV+ VP+G+G V+Y+DASK GLGCVLMQ GKV+AYASRQLK +EQNYPTHD
Subjt: VGYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHD
Query: MELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL------------------
+ELAAVVFA KIWRHYLYGE+IQ+F+DH+SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L
Subjt: MELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL------------------
Query: -----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP--------------
L+ +P LR+ + RG A GQ + +R + + + + EAH SPF+ HP
Subjt: -----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP--------------
Query: ------------------EQVKAPGETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYH
+QVKAP + + LS+P WKWE +SMDFI+GL RT R F+ IW +VDRLTKSAHF+PG+ TYT +WAQL++ +IVR H
Subjt: ------------------EQVKAPGETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYH
Query: GVLLRIV--------STVIRGLVCWISERV-----GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
GV + IV S +GL + ++ + MEFA NNSY++TI MAPFEALYGK C
Subjt: GVLLRIV--------STVIRGLVCWISERV-----GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
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| A0A5A7UR62 Reverse transcriptase | 3.2e-117 | 52.71 | Show/hide |
Query: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
GYYRRFV++FS IA PLT+LTRKG FVW C++SF LK+ L +APVL +P+G+G V+Y+DASK GLGCVLMQ GKV+AYASRQLK +EQNYPTHD+
Subjt: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
Query: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRESL-------S
ELAAVVFA KIWRHYLYGE+IQ+F+DH SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L++ + L L S
Subjt: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRESL-------S
Query: G--------RGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------EQVKAPGETSPVCVGRLSVPRWKWEEISMDF
G RG A GQ + +R++ + + + EAH SPF+ HP ++VKAP + + LS+P WKWE +SMDF
Subjt: G--------RGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------EQVKAPGETSPVCVGRLSVPRWKWEEISMDF
Query: ISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQI-------------VRYHGV-------LLRIVSTVIRGLVCWISERVGTRFRSM
I+GL RT R F+ IWV+VD LTKSAHF+PG+ TYT +WAQL++ +I +H L +++ ++R + M
Subjt: ISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQI-------------VRYHGV-------LLRIVSTVIRGLVCWISERVGTRFRSM
Query: EFANNNSYRSTIQMAPFEALYGKRC
EFA NNSY++TI MAPFEALYGK C
Subjt: EFANNNSYRSTIQMAPFEALYGKRC
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| A0A5A7V003 Reverse transcriptase | 2.3e-115 | 48.95 | Show/hide |
Query: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
GYYRRFV++FS IA PLT+LTRKG FVW C++S LK+ L +APVL VP+G+G V+Y+DAS GLGCVLMQ GKV+AYASRQLK +EQNYPTHD+
Subjt: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
Query: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL-------------------
ELAAVVFA KIWRHYLYGE+IQ+F+DH+SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L
Subjt: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVL-------------------
Query: ----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------EQVKAP
L+ +P LR+ + RG A GQ + +R++ I + + EAH SPF+ HP ++VKAP
Subjt: ----------LSPRPDLRESL-----------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------EQVKAP
Query: GETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHGVLLRIV--------STVIRGLVC
+ + LS+P WKWE +SMDFI+GL RT + F+ IWV+VDRLTKSAHF+PG+ TYT +WAQL++ +IVR HGV + IV S +GL
Subjt: GETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHGVLLRIV--------STVIRGLVC
Query: WISERV------------------------------------GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
+ R+ + MEFA NNSY++TI MAPFEALYGK C
Subjt: WISERV------------------------------------GTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
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| A0A5A7V810 Reverse transcriptase | 2.7e-116 | 50.44 | Show/hide |
Query: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
GYYRRFV++FS IA PLT+LTRK FVW C++SF LK+ L +APVL VP+G+G V+Y+DASK GL CVLMQ GKV+AYASRQLK +EQNYPTHD+
Subjt: GYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHDM
Query: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRESL--------
ELAAVVFA KIWRHYLYGE+IQ+F+DH+SLKY FTQKE NMRQRRWLELVKDYDC+ILYHPGKANVVAD LSRK SHSA L++ + L L
Subjt: ELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRESL--------
Query: --------------------------------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------------
RG A GQ + +R++ + + + EAH SPF+ HP
Subjt: --------------------------------SGRGCAIVGQWAD----------VQRQVVCSGCCRIASRVALEAHDSPFAWHP---------------
Query: -----------------EQVKAPGETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHG
+QVKAP + + LS+P WKWE +SMDFI+GL RT R F+ IWV+VDRLTKSAHF+PG+ TYT +WAQL++ +IVR HG
Subjt: -----------------EQVKAPGETSPVCVGRLSVPRWKWEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYHG
Query: VLLRIVS-TVIRGLVCWISERVGTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
V + IVS R + + MEFA NNSY++TI MAPFEALYGK C
Subjt: VLLRIVS-TVIRGLVCWISERVGTRFRSMEFANNNSYRSTIQMAPFEALYGKRC
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 6.8e-32 | 37.86 | Show/hide |
Query: PIGCLPVSRKVESCPVGYYRRFVKDFSAIAWPLTRLTRKGVEF-VWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAY
PI P K GYYR+F+ +F+ IA P+T+ +K ++ + D +F +LK ++ P+L VP+ T + DAS LG VL Q G ++Y
Subjt: PIGCLPVSRKVESCPVGYYRRFVKDFSAIAWPLTRLTRKGVEF-VWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAY
Query: ASRQLKPYEQNYPTHDMELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSR----------
SR L +E NY T + EL A+V+A K +RHYL G ++ SDHQ L +L+ K+ N + RW + ++D I Y GK N VAD LSR
Subjt: ASRQLKPYEQNYPTHDMELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSR----------
Query: KTSHSA
+T HSA
Subjt: KTSHSA
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 2.3e-24 | 37.08 | Show/hide |
Query: YYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQ----HGKVIAYASRQLKPYEQNYPT
YYRRF+K+F+ + +TRL +K V F W C ++F LK L + +L P+ + + DASK G VL Q H +AYASR E N T
Subjt: YYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQ----HGKVIAYASRQLKPYEQNYPT
Query: HDMELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKT
+ ELAA+ +A +R Y+YG+ + +DH+ L YLF+ + + R +++Y+ + Y GK N VAD LSR T
Subjt: HDMELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKT
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 6.6e-27 | 38.51 | Show/hide |
Query: GYYRRFVKDFSAIAWPLTRLTRKGVEF-VWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHD
GYYR+F+ +++ IA P+T +K + E+F +LK + P+L +P+ V+ DAS LG VL Q+G I++ SR L +E NY +
Subjt: GYYRRFVKDFSAIAWPLTRLTRKGVEF-VWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGKVIAYASRQLKPYEQNYPTHD
Query: MELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSR
EL A+V+A K +RHYL G + + SDHQ L++L KE + RW + +Y +I Y GK N VAD LSR
Subjt: MELAAVVFARKIWRHYLYGERIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 9.2e-29 | 37.77 | Show/hide |
Query: YYRRFVKDFSAIAWPLTRLTR-----------KGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQ----HGKVIAYASR
YYR+F++D++ +A PLT LTR V D +SF LK L S+ +LA P T + DAS + +G VL Q + IAY SR
Subjt: YYRRFVKDFSAIAWPLTRLTR-----------KGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQ----HGKVIAYASR
Query: QLKPYEQNYPTHDMELAAVVFARKIWRHYLYGE-RIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSR
L E+NY T + E+ A++++ R YLYG I++++DHQ L + + FN + +RW +++Y+C+++Y PGK+NVVAD LSR
Subjt: QLKPYEQNYPTHDMELAAVVFARKIWRHYLYGE-RIQMFSDHQSLKYLFTQKEFNMRQRRWLELVKDYDCQILYHPGKANVVADTLSR
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| Q9UR07 Transposon Tf2-11 polyprotein | 4.0e-24 | 24.94 | Show/hide |
Query: VGYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGK-----VIAYASRQLKPYEQN
V Y R+F+ S + PL L +K V + W ++ +K+ L S PVL + + +++ DAS +G VL Q + Y S ++ + N
Subjt: VGYYRRFVKDFSAIAWPLTRLTRKGVEFVWDGRCDESFARLKRSLTSAPVLAVPEGTGGLVVYNDASKFGLGCVLMQHGK-----VIAYASRQLKPYEQN
Query: YPTHDMELAAVVFARKIWRHYLYG--ERIQMFSDHQSLKYLFTQKE--FNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRE
Y D E+ A++ + K WRHYL E ++ +DH++L T + N R RW ++D++ +I Y PG AN +AD LSR + P P E
Subjt: YPTHDMELAAVVFARKIWRHYLYG--ERIQMFSDHQSLKYLFTQKE--FNMRQRRWLELVKDYDCQILYHPGKANVVADTLSRKTSHSAVLLSPRPDLRE
Query: SLSGRGCAIVGQWADVQRQVVC-------------SGCCRIASRVALEAHDSPFAWHPEQVKAPGETSPVCV--------GRLSVP-------------R
S + D + QVV + R+ + L+ D +Q+ P +T G+L P
Subjt: SLSGRGCAIVGQWADVQRQVVC-------------SGCCRIASRVALEAHDSPFAWHPEQVKAPGETSPVCV--------GRLSVP-------------R
Query: WK---------------------------------------WEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYH
WK WE +SMDFI+ L +S ++ ++V+VDR +K A +P + T EQ A++F ++++ Y
Subjt: WK---------------------------------------WEEISMDFISGLSRTSRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIVRYH
Query: G
G
Subjt: G
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