; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014532 (gene) of Chayote v1 genome

Gene IDSed0014532
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG01:70525770..70527042
RNA-Seq ExpressionSed0014532
SyntenySed0014532
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]4.9e-11267.43Show/hide
Query:  KNTSAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLI
        K+T+A  S   NREVWS NLREE+EL+ EYLPEFP+V ID EFPGFL  TPKG+SEEEFY CLRFNVNRL+ILQLGLTL D KG I  TWEFNFRDFD +
Subjt:  KNTSAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLI

Query:  SDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHG
        SDM  VSSLDSFLKNKGFDF KL+K GIA E+F+ +FLPICRSG++ +W+TFHGFYDI YL+KLLKI+ I  SMA FATTAQ LLGT+ DLKHMARYC G
Subjt:  SDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHG

Query:  LLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTATSSPML--KYPSMPQCSSASAYR
        LL+G+LGLKKLA+L++VKR+  AHFA SD+L T SVY KMK +FKL  EQCEGFLYGLP+ I   +   K+IDPST T  P L  K+  +  CS      
Subjt:  LLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTATSSPML--KYPSMPQCSSASAYR

Query:  SSPIFVG
        S+P+ VG
Subjt:  SSPIFVG

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]1.3e-11266.13Show/hide
Query:  KNTSAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVSEEEFYECLRFNVNRLS
        K+ +A  S   NREVWS+NL +E+E++ EYLPEFPIVAIDTEF                             PGFLRYTPKGVSEEEFY+CLRFNVNRL+
Subjt:  KNTSAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVSEEEFYECLRFNVNRLS

Query:  ILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIA
        ILQLGLTL +  G +  TWEFNFRDFD ISDM GVSSLDSFLKNKGFDF KL++DGIA E+F+ +FLPICRSGR+++W+TFHGFYDIAYL+KLLKI++I 
Subjt:  ILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIA

Query:  TSMAAFATTAQRLLGTIVDLKHMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKV
         SMA FA TAQ LLGT+ DLKHM RYC GLL+GDLGLKKLA+L++VKR+GIAHFAGSDSLLTA+VY KMK MFK+  EQ EGFLYGLPH I++ +  VK+
Subjt:  TSMAAFATTAQRLLGTIVDLKHMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKV

Query:  IDPSTATSSP
        +DPS  T  P
Subjt:  IDPSTATSSP

XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.2e-10569.45Show/hide
Query:  SAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDM
        +A +   + REVWSHNL EEIEL+K YL EFPIVAIDTEFPGFLR+TPKGVS+EEFY+CL+FNVNRLSILQLGLTLTDD G+IG TWEFNF+DFD IS+M
Subjt:  SAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDM

Query:  HGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLN
         GV SLDSFLKNKGF+F KLR  GIAP+EFS  F P+ RSGR+ KW+TFHG YDIAYLMK   I  + TSM+ FA  A  LLGT+ DLKHMARY   L N
Subjt:  HGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLN

Query:  GDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT
        G+LGLKKLA+L+ + RVG AHFAGSDSLLTASVYAKMK++ K+ P+  EGFLYGLP+ I+  R  V ++DPS  T
Subjt:  GDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT

XP_022963784.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.9e-10369.34Show/hide
Query:  AKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMH
        A +   + R+VWSHNL EEIELIK+ L EFPIVAIDTEFPGFLR+TPKGVS+EEFYECL+FNVNRLSILQLGLTLT+D G+IG TWEFNFRDFD IS+M 
Subjt:  AKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMH

Query:  GVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNG
        GV SLDSFLKNKGF+F  LR  GIAPEEF   F PI RSGR+ +W+TFHG YDIAYLMK   IR + TSM+ FA TA  +LGT+ DLKHMA Y   LL+G
Subjt:  GVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNG

Query:  DLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT
        +LGLKKLA+L+ V R G AHFAGSDSLLTASVYAKMK++ K+ P   EGFLYGLP+ I+  R  V ++DPS  T
Subjt:  DLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT

XP_023511526.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]3.7e-10467.52Show/hide
Query:  AKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMH
        A +   + R+VWSHNL EEIELIK+ L EFPIVAIDTEFPGFLR+TPKGVS+EEFYECL+FNVNRLSILQLGLTLT+D G+IG TWEFNF+DFD IS+M 
Subjt:  AKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMH

Query:  GVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNG
        GV SLDSFLKNKGF+F  LR  GIAP+EF   F PI RSG++ +W+TFHG YDIAYLMK   IR + TSM+ FA +A  +LGT+ DLKHMARY + LLNG
Subjt:  GVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNG

Query:  DLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT
        +LGLK+LA+L+ V R G AHFAGSDSLLTA+VYAKMK++ K+ P++ EGFLYGLP+ I+  R  + ++DPS  T
Subjt:  DLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease2.4e-11267.43Show/hide
Query:  KNTSAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLI
        K+T+A  S   NREVWS NLREE+EL+ EYLPEFP+V ID EFPGFL  TPKG+SEEEFY CLRFNVNRL+ILQLGLTL D KG I  TWEFNFRDFD +
Subjt:  KNTSAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLI

Query:  SDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHG
        SDM  VSSLDSFLKNKGFDF KL+K GIA E+F+ +FLPICRSG++ +W+TFHGFYDI YL+KLLKI+ I  SMA FATTAQ LLGT+ DLKHMARYC G
Subjt:  SDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHG

Query:  LLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTATSSPML--KYPSMPQCSSASAYR
        LL+G+LGLKKLA+L++VKR+  AHFA SD+L T SVY KMK +FKL  EQCEGFLYGLP+ I   +   K+IDPST T  P L  K+  +  CS      
Subjt:  LLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTATSSPML--KYPSMPQCSSASAYR

Query:  SSPIFVG
        S+P+ VG
Subjt:  SSPIFVG

A0A6J1DLA5 Poly(A)-specific ribonuclease6.2e-11366.13Show/hide
Query:  KNTSAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVSEEEFYECLRFNVNRLS
        K+ +A  S   NREVWS+NL +E+E++ EYLPEFPIVAIDTEF                             PGFLRYTPKGVSEEEFY+CLRFNVNRL+
Subjt:  KNTSAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVSEEEFYECLRFNVNRLS

Query:  ILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIA
        ILQLGLTL +  G +  TWEFNFRDFD ISDM GVSSLDSFLKNKGFDF KL++DGIA E+F+ +FLPICRSGR+++W+TFHGFYDIAYL+KLLKI++I 
Subjt:  ILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIA

Query:  TSMAAFATTAQRLLGTIVDLKHMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKV
         SMA FA TAQ LLGT+ DLKHM RYC GLL+GDLGLKKLA+L++VKR+GIAHFAGSDSLLTA+VY KMK MFK+  EQ EGFLYGLPH I++ +  VK+
Subjt:  TSMAAFATTAQRLLGTIVDLKHMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKV

Query:  IDPSTATSSP
        +DPS  T  P
Subjt:  IDPSTATSSP

A0A6J1ESM7 Poly(A)-specific ribonuclease5.6e-10669.45Show/hide
Query:  SAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDM
        +A +   + REVWSHNL EEIEL+K YL EFPIVAIDTEFPGFLR+TPKGVS+EEFY+CL+FNVNRLSILQLGLTLTDD G+IG TWEFNF+DFD IS+M
Subjt:  SAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDM

Query:  HGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLN
         GV SLDSFLKNKGF+F KLR  GIAP+EFS  F P+ RSGR+ KW+TFHG YDIAYLMK   I  + TSM+ FA  A  LLGT+ DLKHMARY   L N
Subjt:  HGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLN

Query:  GDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT
        G+LGLKKLA+L+ + RVG AHFAGSDSLLTASVYAKMK++ K+ P+  EGFLYGLP+ I+  R  V ++DPS  T
Subjt:  GDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT

A0A6J1HIZ7 Poly(A)-specific ribonuclease5.8e-10368.25Show/hide
Query:  AKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMH
        A +   + R+VWSHNL EEIELI++ L EFPIVA+DTEFPGFLR+TPKGVS+EEFYECL+FNVNRLSILQLGLTLT+D G+IG TWEFNF+DFD IS+M 
Subjt:  AKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMH

Query:  GVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNG
        GV SLDSFLKNKGF+F  LR  GIAPEEF   F PI RSGR+ +W+TFHG YDIAYLMKL  I  + TSM+ FA TA  LLGT+ DLKHMAR  + L NG
Subjt:  GVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNG

Query:  DLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT
        +LGLKKLA+L+ V R G AHFAGSDSLLTASVYAKMK++ K+  +  EGFLYGLP+ I+  R  V ++DPS  T
Subjt:  DLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT

A0A6J1HL76 Poly(A)-specific ribonuclease9.0e-10469.34Show/hide
Query:  AKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMH
        A +   + R+VWSHNL EEIELIK+ L EFPIVAIDTEFPGFLR+TPKGVS+EEFYECL+FNVNRLSILQLGLTLT+D G+IG TWEFNFRDFD IS+M 
Subjt:  AKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMH

Query:  GVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNG
        GV SLDSFLKNKGF+F  LR  GIAPEEF   F PI RSGR+ +W+TFHG YDIAYLMK   IR + TSM+ FA TA  +LGT+ DLKHMA Y   LL+G
Subjt:  GVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNG

Query:  DLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT
        +LGLKKLA+L+ V R G AHFAGSDSLLTASVYAKMK++ K+ P   EGFLYGLP+ I+  R  V ++DPS  T
Subjt:  DLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTAT

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 91.3e-4339.33Show/hide
Query:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGF-----LRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRI---------GPTWEFNFRDFD
        REVW+ NL  E ELI E + ++P +++DTEFPG      LR+T    + ++ Y  L+ NV+ LS++Q+GLTL+D  G +         G  WEFNFRDFD
Subjt:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGF-----LRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRI---------GPTWEFNFRDFD

Query:  LISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLP---ICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLG-TIVDLKHM
        +  D H   S++  L+ +G DFE+  +DG+  E F+ + +    +C       WVTFH  YD  YLMK+L  R +  ++  F    + L G  + D+KHM
Subjt:  LISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLP---ICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLG-TIVDLKHM

Query:  ARYCHGLLNGDLGLKKLARLVNVKR-VGIAHFAGSDSLLTASVYAKMKLMFKL--NPEQCEGFLYGL
         ++C   L G  GL ++AR + V R VG  H AGSDSLLT   + +M+ ++ +   PE+  G LYGL
Subjt:  ARYCHGLLNGDLGLKKLARLVNVKR-VGIAHFAGSDSLLTASVYAKMKLMFKL--NPEQCEGFLYGL

Q9LXM4 Putative CCR4-associated factor 1 homolog 85.5e-4244.2Show/hide
Query:  IELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMHGVSSLDSFLKNKGFDFEKL
        + LI++ L  +  +AIDTEFP  LR T +  ++EE Y  + F+V+R  ++QLGLTL D  GRIG TWE NF DF  + D     S++ FL+  G D  K+
Subjt:  IELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMHGVSSLDSFLKNKGFDFEKL

Query:  RKDGIAPEE-FSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNGDLGLKKLARLVNVKRVGI
        R++GI  E  FS MF  + ++ R   WVTFHG YDIAYL+K      +  +   F+    R+LG++ DLK MA  C G L+  LGL+ LA    + RVG 
Subjt:  RKDGIAPEE-FSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNGDLGLKKLARLVNVKRVGI

Query:  AHFAGSDSLLTASVYAKMKLMFKL
        AH AGS++ LTA V+AK+   F L
Subjt:  AHFAGSDSLLTASVYAKMKLMFKL

Q9S9P2 Probable CCR4-associated factor 1 homolog 25.3e-4540.45Show/hide
Query:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYT--------PKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRD
        REVW+HNL +E+ LI++ + +FP VA+DTEFPG +  T        P  +  E  Y+ L+ NVN L ++QLGLTL+D+KG + PT        W+FNFR+
Subjt:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYT--------PKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRD

Query:  FDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV--DK--WVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLK
        F++ISDM  + S++  L+    D EK  + G+  + F+ + +    SG V  DK  WVTFH  YD  YL+KLL  + +   ++ F    ++    + D+K
Subjt:  FDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV--DK--WVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLK

Query:  HMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMK-LMFKLNPEQCEGFLYGL
        ++  +C  L     GL+K+A L+ VKRVGI+H AGSDSLLT   + KMK   F  +  +  GFL+GL
Subjt:  HMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMK-LMFKLNPEQCEGFLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 64.1e-4541.6Show/hide
Query:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGV---SEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRDFDLIS
        REVW+ NL+EE++LI++ + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++QLGLT ++++G + PT        W+FNFR+FDL S
Subjt:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGV---SEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRDFDLIS

Query:  DMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARY
        D+  + S++  LK  G D  K   DGI  + F+ + +    SG V      WVTFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++
Subjt:  DMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARY

Query:  CHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNP-EQCEGFLYGL
        C+ L     GL KLA L+ V+RVGI H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  CHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNP-EQCEGFLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.5e-4441.06Show/hide
Query:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKG---VSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT---------WEFNFRDFDLI
        REVW+ NL  E+ LI+E + +FP VA+DTEFPG +   P G    + E  YE L+ NVN L ++QLGLT +D+KG + PT         W+FNFR+FDL 
Subjt:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKG---VSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT---------WEFNFRDFDLI

Query:  SDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMAR
        SD++   S++  L+  G DF K  + GI  + F+ + +    SG V      WVTFH  YD  YL+KLL  + +  +   F          + D+KH+ +
Subjt:  SDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMAR

Query:  YCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKL-NPEQCEGFLYGL
        +C+ L     GL KLA L++V+RVGI H AGSDSLLT+  + K++  F + + E+  G LYGL
Subjt:  YCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKL-NPEQCEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.8e-4640.45Show/hide
Query:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYT--------PKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRD
        REVW+HNL +E+ LI++ + +FP VA+DTEFPG +  T        P  +  E  Y+ L+ NVN L ++QLGLTL+D+KG + PT        W+FNFR+
Subjt:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYT--------PKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRD

Query:  FDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV--DK--WVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLK
        F++ISDM  + S++  L+    D EK  + G+  + F+ + +    SG V  DK  WVTFH  YD  YL+KLL  + +   ++ F    ++    + D+K
Subjt:  FDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV--DK--WVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLK

Query:  HMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMK-LMFKLNPEQCEGFLYGL
        ++  +C  L     GL+K+A L+ VKRVGI+H AGSDSLLT   + KMK   F  +  +  GFL+GL
Subjt:  HMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMK-LMFKLNPEQCEGFLYGL

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.8e-4640.45Show/hide
Query:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYT--------PKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRD
        REVW+HNL +E+ LI++ + +FP VA+DTEFPG +  T        P  +  E  Y+ L+ NVN L ++QLGLTL+D+KG + PT        W+FNFR+
Subjt:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYT--------PKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRD

Query:  FDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV--DK--WVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLK
        F++ISDM  + S++  L+    D EK  + G+  + F+ + +    SG V  DK  WVTFH  YD  YL+KLL  + +   ++ F    ++    + D+K
Subjt:  FDLISDMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV--DK--WVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLK

Query:  HMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMK-LMFKLNPEQCEGFLYGL
        ++  +C  L     GL+K+A L+ VKRVGI+H AGSDSLLT   + KMK   F  +  +  GFL+GL
Subjt:  HMARYCHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMK-LMFKLNPEQCEGFLYGL

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-4641.6Show/hide
Query:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGV---SEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRDFDLIS
        REVW+ NL+EE++LI++ + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++QLGLT ++++G + PT        W+FNFR+FDL S
Subjt:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGV---SEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRDFDLIS

Query:  DMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARY
        D+  + S++  LK  G D  K   DGI  + F+ + +    SG V      WVTFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++
Subjt:  DMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARY

Query:  CHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNP-EQCEGFLYGL
        C+ L     GL KLA L+ V+RVGI H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  CHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNP-EQCEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-4641.6Show/hide
Query:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGV---SEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRDFDLIS
        REVW+ NL+EE++LI++ + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++QLGLT ++++G + PT        W+FNFR+FDL S
Subjt:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGV---SEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRDFDLIS

Query:  DMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARY
        D+  + S++  LK  G D  K   DGI  + F+ + +    SG V      WVTFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++
Subjt:  DMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARY

Query:  CHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNP-EQCEGFLYGL
        C+ L     GL KLA L+ V+RVGI H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  CHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNP-EQCEGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-4641.6Show/hide
Query:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGV---SEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRDFDLIS
        REVW+ NL+EE++LI++ + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++QLGLT ++++G + PT        W+FNFR+FDL S
Subjt:  REVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGV---SEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPT--------WEFNFRDFDLIS

Query:  DMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARY
        D+  + S++  LK  G D  K   DGI  + F+ + +    SG V      WVTFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++
Subjt:  DMHGVSSLDSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRV----DKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARY

Query:  CHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNP-EQCEGFLYGL
        C+ L     GL KLA L+ V+RVGI H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  CHGLLNGDLGLKKLARLVNVKRVGIAHFAGSDSLLTASVYAKMKLMFKLNP-EQCEGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACACGTCGGCCAAAATTTCAAGTTCTTTCAATAGGGAGGTTTGGTCTCACAATCTTCGCGAAGAGATAGAACTTATTAAAGAGTATTTGCCAGAGTTTCCAAT
AGTAGCCATTGATACTGAATTTCCAGGCTTTCTTCGGTATACTCCAAAAGGTGTTTCGGAAGAAGAGTTTTACGAGTGTCTTCGATTCAACGTCAACCGGTTGAGCATAC
TTCAGCTCGGTCTTACACTCACGGACGACAAAGGAAGAATCGGGCCGACATGGGAGTTCAACTTTAGAGACTTTGATTTGATTTCTGATATGCATGGTGTTTCGTCGTTG
GATTCGTTTCTCAAGAACAAGGGTTTTGACTTTGAAAAGTTAAGAAAAGATGGAATTGCACCCGAGGAATTCTCAGCAATGTTTCTGCCGATATGTCGTAGTGGTCGAGT
TGACAAATGGGTCACATTTCACGGATTTTACGATATTGCTTACCTAATGAAGCTTTTGAAGATCAGATTCATAGCGACATCGATGGCGGCGTTCGCAACCACTGCTCAAC
GATTGTTGGGAACGATCGTCGATCTCAAGCACATGGCTCGGTATTGTCACGGCTTGCTTAATGGCGACCTAGGGCTAAAAAAACTAGCCAGATTGGTCAACGTTAAGCGA
GTTGGTATTGCACACTTTGCTGGTTCTGATAGTTTGCTCACTGCTTCTGTTTATGCCAAGATGAAATTGATGTTTAAGCTCAACCCTGAGCAATGTGAAGGGTTTTTGTA
TGGACTGCCGCACTCGATTCGATCTACCCGACATACTGTCAAGGTTATCGATCCATCCACAGCTACTTCGTCGCCAATGTTGAAATACCCGTCAATGCCACAATGCTCGT
CGGCATCAGCTTACAGATCATCGCCTATATTCGTGGGCGACTTTTTAATTTTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACACGTCGGCCAAAATTTCAAGTTCTTTCAATAGGGAGGTTTGGTCTCACAATCTTCGCGAAGAGATAGAACTTATTAAAGAGTATTTGCCAGAGTTTCCAAT
AGTAGCCATTGATACTGAATTTCCAGGCTTTCTTCGGTATACTCCAAAAGGTGTTTCGGAAGAAGAGTTTTACGAGTGTCTTCGATTCAACGTCAACCGGTTGAGCATAC
TTCAGCTCGGTCTTACACTCACGGACGACAAAGGAAGAATCGGGCCGACATGGGAGTTCAACTTTAGAGACTTTGATTTGATTTCTGATATGCATGGTGTTTCGTCGTTG
GATTCGTTTCTCAAGAACAAGGGTTTTGACTTTGAAAAGTTAAGAAAAGATGGAATTGCACCCGAGGAATTCTCAGCAATGTTTCTGCCGATATGTCGTAGTGGTCGAGT
TGACAAATGGGTCACATTTCACGGATTTTACGATATTGCTTACCTAATGAAGCTTTTGAAGATCAGATTCATAGCGACATCGATGGCGGCGTTCGCAACCACTGCTCAAC
GATTGTTGGGAACGATCGTCGATCTCAAGCACATGGCTCGGTATTGTCACGGCTTGCTTAATGGCGACCTAGGGCTAAAAAAACTAGCCAGATTGGTCAACGTTAAGCGA
GTTGGTATTGCACACTTTGCTGGTTCTGATAGTTTGCTCACTGCTTCTGTTTATGCCAAGATGAAATTGATGTTTAAGCTCAACCCTGAGCAATGTGAAGGGTTTTTGTA
TGGACTGCCGCACTCGATTCGATCTACCCGACATACTGTCAAGGTTATCGATCCATCCACAGCTACTTCGTCGCCAATGTTGAAATACCCGTCAATGCCACAATGCTCGT
CGGCATCAGCTTACAGATCATCGCCTATATTCGTGGGCGACTTTTTAATTTTTGGCTGA
Protein sequenceShow/hide protein sequence
MKNTSAKISSSFNREVWSHNLREEIELIKEYLPEFPIVAIDTEFPGFLRYTPKGVSEEEFYECLRFNVNRLSILQLGLTLTDDKGRIGPTWEFNFRDFDLISDMHGVSSL
DSFLKNKGFDFEKLRKDGIAPEEFSAMFLPICRSGRVDKWVTFHGFYDIAYLMKLLKIRFIATSMAAFATTAQRLLGTIVDLKHMARYCHGLLNGDLGLKKLARLVNVKR
VGIAHFAGSDSLLTASVYAKMKLMFKLNPEQCEGFLYGLPHSIRSTRHTVKVIDPSTATSSPMLKYPSMPQCSSASAYRSSPIFVGDFLIFG