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Sed0014538 (gene) of Chayote v1 genome

Gene IDSed0014538
OrganismSechium edule (Chayote v1)
DescriptionOxidoreductase/transition metal ion-binding protein
Genome locationLG09:38144781..38145559
RNA-Seq ExpressionSed0014538
SyntenySed0014538
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461231.1 PREDICTED: uncharacterized protein LOC103499879 [Cucumis melo]1.1e-5188.24Show/hide
Query:  AGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLL
        A   HSQPTF LHLCFFFLILLMFLSFSWYSNYESA+E VFDQLKLLLIVSPLLLLLLVHWLSN +NG LP L+PLPEK+SLHRAG TPWGVGFLLVLLL
Subjt:  AGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLL

Query:  FMISYQSYFQERWFPLSSR
        FMISYQSYFQERWFPL SR
Subjt:  FMISYQSYFQERWFPLSSR

XP_022151890.1 uncharacterized protein LOC111019747 [Momordica charantia]4.2e-5188.03Show/hide
Query:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM
        +  SQP+F LHLCFFFLILLMFL+FSWYSNYESA++GVFDQLKLLLI SPLLLLL VHWLSNA+NGRLPPLLPLPEK SLHRAG+TPWGVGFLLVLLLFM
Subjt:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM

Query:  ISYQSYFQERWFPLSSR
        ISYQSYFQERWFPL SR
Subjt:  ISYQSYFQERWFPLSSR

XP_022991944.1 uncharacterized protein LOC111488435 [Cucurbita maxima]2.4e-5187.18Show/hide
Query:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM
        NS SQPTF LHLCFFFLIL MFL+FSWYS YESA+EGVFDQLKLLLI+SPLLLLLLVHWLSN ENGRLPPL+PLPEK SLHRAG TPWGVGF+LV+LLFM
Subjt:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM

Query:  ISYQSYFQERWFPLSSR
        ISYQSYFQERWFP+ SR
Subjt:  ISYQSYFQERWFPLSSR

XP_023548678.1 uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo]8.4e-5286.67Show/hide
Query:  AAGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLL
        +A NS SQPTF LHLCFFFLIL MFL+FSW+S YESA+EGVFDQLKLLLIVSPLLLLLLVHWLSN ENGRLPPL+PLPEK SLHRAG TPWGVGF+LV+L
Subjt:  AAGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLL

Query:  LFMISYQSYFQERWFPLSSR
        LFMISYQSYFQERWFPL SR
Subjt:  LFMISYQSYFQERWFPLSSR

XP_038898802.1 uncharacterized protein LOC120086305 [Benincasa hispida]6.8e-5490Show/hide
Query:  AAGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLL
        +A NSHSQPTF LHLCFFFLILLMFLSFSWYSNYESA+EGVFDQLKLLLIVSPLLLLL+VHWLSN ENGRLP L+PLPE+ SLHRAG TPWGVGFLLVLL
Subjt:  AAGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLL

Query:  LFMISYQSYFQERWFPLSSR
        LFMISYQSYFQERWFPL SR
Subjt:  LFMISYQSYFQERWFPLSSR

TrEMBL top hitse value%identityAlignment
A0A0A0K9W6 Uncharacterized protein2.6e-5188.03Show/hide
Query:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM
        N+HSQPTF LHLCFFFLILLMFLSFSWYSNYESA+E VFDQLKLLLIVSPLLLLLLVHWLSN ++G LP L+PLPEK SLHRAG TPWGVGFLLVLLLFM
Subjt:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM

Query:  ISYQSYFQERWFPLSSR
        +SYQSYFQERWFPL SR
Subjt:  ISYQSYFQERWFPLSSR

A0A1S3CE82 uncharacterized protein LOC1034998795.3e-5288.24Show/hide
Query:  AGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLL
        A   HSQPTF LHLCFFFLILLMFLSFSWYSNYESA+E VFDQLKLLLIVSPLLLLLLVHWLSN +NG LP L+PLPEK+SLHRAG TPWGVGFLLVLLL
Subjt:  AGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLL

Query:  FMISYQSYFQERWFPLSSR
        FMISYQSYFQERWFPL SR
Subjt:  FMISYQSYFQERWFPLSSR

A0A6J1DCG1 uncharacterized protein LOC1110197472.0e-5188.03Show/hide
Query:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM
        +  SQP+F LHLCFFFLILLMFL+FSWYSNYESA++GVFDQLKLLLI SPLLLLL VHWLSNA+NGRLPPLLPLPEK SLHRAG+TPWGVGFLLVLLLFM
Subjt:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM

Query:  ISYQSYFQERWFPLSSR
        ISYQSYFQERWFPL SR
Subjt:  ISYQSYFQERWFPLSSR

A0A6J1GPN5 uncharacterized protein LOC1114563232.6e-5185Show/hide
Query:  AAGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLL
        +  NS SQPTF LHLCFFFLIL MFL+FSW+S YESA+EGVFDQLKLLLIVSPLLLLLL+HWLSN ENGRLPPL+PLPEK SLHRAG TPWGVGF+LV+L
Subjt:  AAGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLL

Query:  LFMISYQSYFQERWFPLSSR
        LFMISYQSYFQERWFPL SR
Subjt:  LFMISYQSYFQERWFPLSSR

A0A6J1JW83 uncharacterized protein LOC1114884351.2e-5187.18Show/hide
Query:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM
        NS SQPTF LHLCFFFLIL MFL+FSWYS YESA+EGVFDQLKLLLI+SPLLLLLLVHWLSN ENGRLPPL+PLPEK SLHRAG TPWGVGF+LV+LLFM
Subjt:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFM

Query:  ISYQSYFQERWFPLSSR
        ISYQSYFQERWFP+ SR
Subjt:  ISYQSYFQERWFPLSSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein4.5e-1140.2Show/hide
Query:  MFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHR-----------AGSTPWGVGFLLVLLLFMISYQSYFQE
        +FL  SWY + E A E   +Q+   L++ PL L++LV WLS+ EN    P   L    S  R            GS+PWGV  L+VLLL ++ YQS F E
Subjt:  MFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHR-----------AGSTPWGVGFLLVLLLFMISYQSYFQE

Query:  RW
         W
Subjt:  RW

AT2G31940.1 unknown protein3.3e-3056.9Show/hide
Query:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAE--NGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLL
        +    P   LHLC F LILLMF++ SWY++YE  +EG   Q KL L+ SPLLLLL VH+LS+ +   G +  L+ L E+ SL+RAG TPWGV F+LV L 
Subjt:  NSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAE--NGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLL

Query:  FMISYQSYFQERWFPL
        FM+SYQS FQERWFPL
Subjt:  FMISYQSYFQERWFPL

AT3G06890.1 unknown protein1.8e-0433.9Show/hide
Query:  LIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFMISYQ
        L++ P++LLL + +LS+     +  +    E  S+HR   +P GV   LVL+LF++ Y+
Subjt:  LIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFMISYQ

AT5G19875.1 unknown protein3.1e-2856.07Show/hide
Query:  HLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFMISYQSYFQER
        HLCF F+++   LSF+WY N+ES +E   D LKL+ I +PL LLLLVH+ S    G L   +P PE+ S+HRAGS+PWGV  +LVL+LFM+SYQS FQER
Subjt:  HLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFMISYQSYFQER

Query:  WFPLSSR
        WFP  ++
Subjt:  WFPLSSR

AT5G42146.1 unknown protein4.3e-0632.14Show/hide
Query:  SQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAEN--GRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFMI
        S P   L      + LL+FLS   Y  Y+  +E     LKL ++  P+L + ++  LS       +    +   +  SL   G+ PWGV  +L+LLL ++
Subjt:  SQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAEN--GRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFMI

Query:  SYQSYFQERWFP
        S QSYF   W+P
Subjt:  SYQSYFQERWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGGAAACTCCCACTCTCAGCCCACTTTCCTCCTCCATCTTTGCTTCTTCTTCCTCATCCTCCTCATGTTCCTATCCTTCTCTTGGTACTCCAACTACGAGTC
CGCGCTCGAAGGCGTCTTCGACCAGCTCAAGCTCCTCCTCATCGTCTCCCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAATGCCGAAAACGGCCGCCTACCGC
CCCTCCTCCCGCTTCCCGAAAAACACTCGCTCCACCGTGCTGGATCGACCCCGTGGGGCGTAGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCTTATCAATCTTAC
TTCCAAGAAAGGTGGTTTCCTCTATCGAGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
CAAGAAGTCACCAAAGGTTGCAAATTTAACCCATTTCAGAAAAAGGAAAGAAGAAAAGAAGCAAAGCCATTTCATTTCCCACTATATATATAAAAGCCTTAGGGCACATC
AATTTTCCCACAACACACACCAACAAAACAAATCCAACCACTTAAACCAAAATAACCACTTCCTTAATCTCCTCAAAAGCTCTCAAACGCCGCCGTCCATGGCCGCCGGA
AACTCCCACTCTCAGCCCACTTTCCTCCTCCATCTTTGCTTCTTCTTCCTCATCCTCCTCATGTTCCTATCCTTCTCTTGGTACTCCAACTACGAGTCCGCGCTCGAAGG
CGTCTTCGACCAGCTCAAGCTCCTCCTCATCGTCTCCCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAATGCCGAAAACGGCCGCCTACCGCCCCTCCTCCCGC
TTCCCGAAAAACACTCGCTCCACCGTGCTGGATCGACCCCGTGGGGCGTAGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCTTATCAATCTTACTTCCAAGAAAGG
TGGTTTCCTCTATCGAGCCGGTGATCCATCGATGGACCGAGCCGTGATAGGTTCTAGTGATTGTCGTTTTGTTGTCTTCGAGCAATACTTTTATGATTATTTTTGTCGAT
ACAACAGTAATATTTGCGGTTGAGAAGACCTCTAAATCTATGATATATATATATATTGTCAATTAACCATTAATAGTCTCAACAAGAAGAATTTACTTACTATCATTTTG
CAAATATAG
Protein sequenceShow/hide protein sequence
MAAGNSHSQPTFLLHLCFFFLILLMFLSFSWYSNYESALEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPPLLPLPEKHSLHRAGSTPWGVGFLLVLLLFMISYQSY
FQERWFPLSSR