; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014547 (gene) of Chayote v1 genome

Gene IDSed0014547
OrganismSechium edule (Chayote v1)
Descriptionhistone H1-like
Genome locationLG11:1980920..1982314
RNA-Seq ExpressionSed0014547
SyntenySed0014547
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599320.1 Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5966.67Show/hide
Query:  MSSAADEL----------SVVEPVK-----------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLL
        MSSAAD +          +V +PV+           KASKAKKPS AKRT+SSP+HPPFF+MISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLL
Subjt:  MSSAADEL----------SVVEPVK-----------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLL

Query:  LVQLKKLVAADKIVKIKNSYKLPSARSVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSKAAA-------VKPKA
        LV LKKLVAADK+VK+KNSYKLPSARS   K AAA       AS+++ AA V+ KK   AK KAKTA KPK    +KP   AKSK  A        K KA
Subjt:  LVQLKKLVAADKIVKIKNSYKLPSARSVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSKAAA-------VKPKA

Query:  AEKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
        AEKVKKVAPKPKP AKPAK A+T SRTSPGK+AAPAAK KKVAAK  K  KSPA+KVQARKVKK
Subjt:  AEKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

XP_004139246.1 histone H1 [Cucumis sativus]2.8e-6167.3Show/hide
Query:  MSSAADEL--------SVVEPVK-----------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLV
        MSSAAD +        +V +P +           KASKAKKPS AK+ +SSP+HPPF QMISEAIVSLKERTGSSQYAITKF EEKHKQLPSNFRKLLLV
Subjt:  MSSAADEL--------SVVEPVK-----------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLV

Query:  QLKKLVAADKIVKIKNSYKLPSARSVKEKTAAAASAEVAA-APVAS-------KKTVAAKSKAKTAAKP------KSKPMTVAKSKA-----AAVKPKAA
         LKKLVAA+K+VK+KNSYKLPSARS++ K AAAA+A V A  PV+S       KK   AKSKAKTAAKP      K KP TVAKSK       A K KAA
Subjt:  QLKKLVAADKIVKIKNSYKLPSARSVKEKTAAAASAEVAA-APVAS-------KKTVAAKSKAKTAAKP------KSKPMTVAKSKA-----AAVKPKAA

Query:  EKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
        EKVKKVAPKPKP AK AK A+T SRTSPGKRAAPA K KKVAAK  K  KSPA+KVQARKVKK
Subjt:  EKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

XP_022946127.1 histone H1-like [Cucurbita moschata]4.5e-5966.29Show/hide
Query:  MSSAADEL----------SVVEPVK-----------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLL
        MSSAAD +          +V +PV+           KASKAKKPS AKRT+SSP+HPPFF+MISEAIVSLKERTGSSQYAITKF+EEKHK+LPSNFRKLL
Subjt:  MSSAADEL----------SVVEPVK-----------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLL

Query:  LVQLKKLVAADKIVKIKNSYKLPSARSVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSKAAA-------VKPKA
        LV LKKLVAADK+VK+KNSYKLPSARS   K AAA       AS+++ AA V+ KK   AK KAKTA KPK    +KP + AKSK  A        K KA
Subjt:  LVQLKKLVAADKIVKIKNSYKLPSARSVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSKAAA-------VKPKA

Query:  AEKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
        AEKVKKVAPKPKP AKPAK A+T SRTSPGK+AAPAAK KKVAAK  K  KSPA+KVQARKVKK
Subjt:  AEKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

XP_022999095.1 histone H1-like [Cucurbita maxima]7.7e-5970.59Show/hide
Query:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR
        D  S      KASKAKKPS AKRT+SSP+HPPFF+MISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLV LKKLVAADK+VK+KNSYKLPSAR
Subjt:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR

Query:  SVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSK-------AAAVKPKAAEKVKKVAPKPKPVAKPAKAARTSSR
        S   K AAA       AS+++ AA V+ KK   AK KAKTA KPK    +KP   AKSK        A  K KAAEKVKKVAPKPKP AKPAK A+T SR
Subjt:  SVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSK-------AAAVKPKAAEKVKKVAPKPKPVAKPAKAARTSSR

Query:  TSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
         SPGK+AAPAAK KKVAAK  K  KSPA+KVQARKVKK
Subjt:  TSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

XP_023521173.1 histone H1-like [Cucurbita pepo subsp. pepo]1.6e-5971.01Show/hide
Query:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR
        D  S      KASKAKKPS AKRT+SSP+HPPFF+MISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLV LKKLVAADK+VK+KNSYKLPSAR
Subjt:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR

Query:  SVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSKAAA-------VKPKAAEKVKKVAPKPKPVAKPAKAARTSSR
        S   K AAA       AS+++ AA V+ KK   AK KAKTA KPK    +KP   AKSK  A        K KAAEKVKKVAPKPKP AKPAK A+T SR
Subjt:  SVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSKAAA-------VKPKAAEKVKKVAPKPKPVAKPAKAARTSSR

Query:  TSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
        TSPGK+AAPAAK KKVAAK  K  KSPA+KVQARKVKK
Subjt:  TSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

TrEMBL top hitse value%identityAlignment
A0A1S3C278 histone H1-like2.7e-5769.04Show/hide
Query:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR
        D  S      KASKAKKPS AK+ +SSP+HPPF QMISEAIVSLKERTGSSQYAITKF EEKHKQLPSNFRKLLLV LKKLVAADK+VK+KNSYKLPSAR
Subjt:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR

Query:  SVKEKTAAAASAEVAAAPVAS--------KKTVAAKSKAKTAAK------PKSKPMTVAKSKA-----AAVKPKAAEKVKKVAPKPKPVAKPAKAARTSS
        S++ K AAAA       PV+S        KK   AK KAKTAAK       K KP TV KSK       A K KAAEKVKKVAPKPK  AK  K A+T S
Subjt:  SVKEKTAAAASAEVAAAPVAS--------KKTVAAKSKAKTAAK------PKSKPMTVAKSKA-----AAVKPKAAEKVKKVAPKPKPVAKPAKAARTSS

Query:  RTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
        RTSPGKRAAPAAK KKVAAK  K  KSPA+KVQARKVKK
Subjt:  RTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

A0A5D3D4H1 Histone H1-like3.2e-5869.46Show/hide
Query:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR
        D  S      KASKAKKPS AK+ +SSP+HPPF QMISEAIVSLKERTGSSQYAITKF EEKHKQLPSNFRKLLLV LKKLVAADK+VK+KNSYKLPSAR
Subjt:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR

Query:  SVKEKTAAAASAEVAAAPVAS--------KKTVAAKSKAKTAAKP------KSKPMTVAKSKA-----AAVKPKAAEKVKKVAPKPKPVAKPAKAARTSS
        S++ K AAAA       PV+S        KK   AK KAKTAAKP      K KP TV KSK       A K KAAEKVKKVAPKPK  AK  K A+T S
Subjt:  SVKEKTAAAASAEVAAAPVAS--------KKTVAAKSKAKTAAKP------KSKPMTVAKSKA-----AAVKPKAAEKVKKVAPKPKPVAKPAKAARTSS

Query:  RTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
        RTSPGKRAAPAAK KKVAAK  K  KSPA+KVQARKVKK
Subjt:  RTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

A0A6J1CNP7 histone H1-like7.0e-5866.67Show/hide
Query:  SSAADELSVVEPVK-------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVK
        + AA+ L+V    K       KASKAKKPS AKR KSSP+HPPFFQMISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLV LKKLVAADK+VK
Subjt:  SSAADELSVVEPVK-------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVK

Query:  IKNSYKLPSARSVKEKTAA------AASAEVAAAPVASKKTVAAKSKAKTAAKPKS----KPMTVAKSK--------AAAVKPKAAEKVKKVAPKPKPVA
        +KNSYKLPSARS++ K AA       AS+++ AA    KK    K KAKTA KPK     KP T++KSK        AAA KPKAA KV K A K KP A
Subjt:  IKNSYKLPSARSVKEKTAA------AASAEVAAAPVASKKTVAAKSKAKTAAKPKS----KPMTVAKSK--------AAAVKPKAAEKVKKVAPKPKPVA

Query:  KPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
        +PAK A+T ++TSPGKRAAPAAK KKVAAK  K  KSPA+KVQARKVKK
Subjt:  KPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

A0A6J1G2W2 histone H1-like2.2e-5966.29Show/hide
Query:  MSSAADEL----------SVVEPVK-----------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLL
        MSSAAD +          +V +PV+           KASKAKKPS AKRT+SSP+HPPFF+MISEAIVSLKERTGSSQYAITKF+EEKHK+LPSNFRKLL
Subjt:  MSSAADEL----------SVVEPVK-----------KASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLL

Query:  LVQLKKLVAADKIVKIKNSYKLPSARSVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSKAAA-------VKPKA
        LV LKKLVAADK+VK+KNSYKLPSARS   K AAA       AS+++ AA V+ KK   AK KAKTA KPK    +KP + AKSK  A        K KA
Subjt:  LVQLKKLVAADKIVKIKNSYKLPSARSVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSKAAA-------VKPKA

Query:  AEKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
        AEKVKKVAPKPKP AKPAK A+T SRTSPGK+AAPAAK KKVAAK  K  KSPA+KVQARKVKK
Subjt:  AEKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

A0A6J1KEC3 histone H1-like3.7e-5970.59Show/hide
Query:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR
        D  S      KASKAKKPS AKRT+SSP+HPPFF+MISEAIVSLKERTGSSQYAITKF+EEKHKQLPSNFRKLLLV LKKLVAADK+VK+KNSYKLPSAR
Subjt:  DELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSAR

Query:  SVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSK-------AAAVKPKAAEKVKKVAPKPKPVAKPAKAARTSSR
        S   K AAA       AS+++ AA V+ KK   AK KAKTA KPK    +KP   AKSK        A  K KAAEKVKKVAPKPKP AKPAK A+T SR
Subjt:  SVKEKTAAA-------ASAEVAAAPVASKKTVAAKSKAKTAAKPK----SKPMTVAKSK-------AAAVKPKAAEKVKKVAPKPKPVAKPAKAARTSSR

Query:  TSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK
         SPGK+AAPAAK KKVAAK  K  KSPA+KVQARKVKK
Subjt:  TSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQARKVKK

SwissProt top hitse value%identityAlignment
P08283 Histone H12.8e-2750.44Show/hide
Query:  VEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSARSVKEK
        VE  KKA K  KP  A + ++  SHP + +MI +AIVSLKE+ GSSQYAI KF EEK KQLP+NF+KLLL  LKK VA+ K++K+K S+KL +A   K+ 
Subjt:  VEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSARSVKEK

Query:  TAAAASAEVAAAPVASKKTVAAKSKAKTAAKPK--SKPMTV-AKSKAAAVKPK-AAEKVKKVAPKPKPV------AKPAKAARTSSRTSPGKRAAPAAK-
          A   A+ AA   + K   AAK KAK   KPK  SK   V AK K AA KPK  A K K  A KPK V       KPAK A+TS +T+PGK+ A   K 
Subjt:  TAAAASAEVAAAPVASKKTVAAKSKAKTAAKPK--SKPMTV-AKSKAAAVKPK-AAEKVKKVAPKPKPV------AKPAKAARTSSRTSPGKRAAPAAK-

Query:  -TKKVAAKS--KKIAKSPAKKVQARK
          KKV  KS   K  KSP KKV  ++
Subjt:  -TKKVAAKS--KKIAKSPAKKVQARK

P23444 Histone H11.2e-2751.58Show/hide
Query:  ASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHK-QLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSARSVKEKTAAA-
        A+KAKK +A K+ ++SP+H P+ +M+SEAI SLKERTGSS YAI KF E+KHK +LP NFRKLL VQLKKLVA  K+ K+KNSYKL SA     K  AA 
Subjt:  ASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHK-QLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSARSVKEKTAAA-

Query:  ----ASAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKAAA---VKPKAAEKVKKVAPKPKPVAKP---AKAARTSSRTSPGKRAAPAAKTKKVA
              A+   A    K    AK+K  T  KP +KP  V K K  A    KP A  K K    KPKP+AK    AKAA+TS++ +PGK+ APA K    A
Subjt:  ----ASAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKAAA---VKPKAAEKVKKVAPKPKPVAKP---AKAARTSSRTSPGKRAAPAAKTKKVA

Query:  AKSKKIAKSPAKKVQARKVKK
        A SKK A +P +K  +RK KK
Subjt:  AKSKKIAKSPAKKVQARKVKK

P26569 Histone H1.21.5e-3351.61Show/hide
Query:  EPVKKASKAKKPSAAKRT------------KSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSY
        +P  K  K+KK + AK T            K++ SHP + +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV LK+LVA++K+VK+K S+
Subjt:  EPVKKASKAKKPSAAKRT------------KSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSY

Query:  KLPSARS---------VKEKTAAAA--SAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKA--AAVKPK-----AAEKVKKVAPKPKPVAKPAKA
        K+PSARS         VK+K    A    +VAAA   +K   AAK   K AAK  +K    AK KA   A KPK     A  K K VA KPK   +PAKA
Subjt:  KLPSARS---------VKEKTAAAA--SAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKA--AAVKPK-----AAEKVKKVAPKPKPVAKPAKA

Query:  ARTSSRTSPGKR-AAPAAK---TKKVAAKSKKIAKSPAKKVQARKVKK
        +RTS+RTSPGK+ AAPA K   TKK  AKS K+ KSPAK+   RK KK
Subjt:  ARTSSRTSPGKR-AAPAAK---TKKVAAKSKKIAKSPAKKVQARKVKK

P37218 Histone H12.2e-3247.62Show/hide
Query:  KKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSA----------
        KK +KAKKP+A ++  ++P+HPP+F+MI +AIV+LKERTGSSQ+AITKF EEK K LPSNF+KLLL QLKK VA++K+VK+KNSYKLPS           
Subjt:  KKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSA----------

Query:  ----------------RSVKEKTAAAASAEVAA-APVASKKTVAAKSKAKTAAKPKSKPMTVAKSK---AAAVKPKAAEKVKKVAPKPKPVAKP------
                         +VK K   AA A+ AA A  A+K   AAK+K    AKP +K   VAK+K   AAA KPKAA K K    K K   KP      
Subjt:  ----------------RSVKEKTAAAASAEVAA-APVASKKTVAAKSKAKTAAKPKSKPMTVAKSK---AAAVKPKAAEKVKKVAPKPKPVAKP------

Query:  --AKAARTSSRTSPGKRAAP---AAKTKKVAAKSKKIAKSPAKKVQARKVKK
          AK A+T++RT+P ++AAP    AK + V     K  KSPAKK   ++ +K
Subjt:  --AKAARTSSRTSPGKRAAP---AAKTKKVAAKSKKIAKSPAKKVQARKVKK

Q9M5W4 Histone H15.4e-3153.42Show/hide
Query:  ADELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSA
        A  + V +  KK   AKKP    ++K + SHP FF+MIS+AI +LKERTGSSQYAI KF E+KHKQLPSNFRKLLL  LKKLVA+ K+VK+KNS+KLPSA
Subjt:  ADELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSA

Query:  RSVKEKTAAAASAEVAAAPVASKKTVAAKSK-AKTAAKPKSKPMTVAKSKA----AAVKPKAAEKVKKVAPKPKPV-AKPAKAARTSSRTSPGKRAAPAA
        R       AA +  +A  P   K  VAAK K AK  AKPK+K    AK+KA     A K  AA+   K A KPK V AKPAK A+T++  SPGK+     
Subjt:  RSVKEKTAAAASAEVAAAPVASKKTVAAKSK-AKTAAKPKSKPMTVAKSKA----AAVKPKAAEKVKKVAPKPKPV-AKPAKAARTSSRTSPGKRAAPAA

Query:  KTKKVAAKSKKIAKSPAKK
          K V  K  K  KSPA K
Subjt:  KTKKVAAKSKKIAKSPAKK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein3.2e-2648.44Show/hide
Query:  VKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSA-------RS
        VK+  + K  +AA + ++  SHP + +MI +AIV+LKERTGSSQYAI KF EEK K+LP  FRKLLL+ LK+LVA+ K+VK+K S+KLPSA       ++
Subjt:  VKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSA-------RS

Query:  VKEKTAAAASAEVAAAPVASKKTVAAKSKAK--TAAKPKS----KPMTVAKSKAAAVKPKAAEKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKT
          EK+A A       A   +K+ VAA SKAK   A KPK+    K    AK+K       AA K K V  KPK  A+PAKAA+T+  TSP K+A   A T
Subjt:  VKEKTAAAASAEVAAAPVASKKTVAAKSKAK--TAAKPKS----KPMTVAKSKAAAVKPKAAEKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKT

Query:  KKVAAKSKKIAKSPAKKVQARKVKK
        KKVA  + K  K+P KKV   K  K
Subjt:  KKVAAKSKKIAKSPAKKVQARKVKK

AT2G18050.1 histone H1-38.0e-1442.14Show/hide
Query:  VKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQ-LPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSARSV-----
        +KK   AKKP   K T    +HPP+FQMI EA++ LKE+ GSS YAI K  EEKHK  LP +FRK L +QLK  VA  K+VKI+ SYKL     +     
Subjt:  VKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQ-LPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSARSV-----

Query:  ------------KEKTAAAASAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKA
                    KE T    S+        S      K K K A +PKS   +V K KA
Subjt:  ------------KEKTAAAASAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKA

AT2G18050.2 histone H1-38.1e-0639.13Show/hide
Query:  MISEAIVSLKERTGSSQYAITKFNEEKHKQ-LPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSARSV--------KEKTAAAASAEVA----AAPVASK
        MI EA++ LKE+ GSS YAI K  EEKHK  LP +FRK L +QLK  VA  K+VKI+ SYKL     +         +K       E+     ++    K
Subjt:  MISEAIVSLKERTGSSQYAITKFNEEKHKQ-LPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSARSV--------KEKTAAAASAEVA----AAPVASK

Query:  KTVAA-KSKAKTAAKPKSKPMTVAKS--KAAAVKPKAA
        KTV+  K + K   K   +P ++  S  K  A+K  AA
Subjt:  KTVAA-KSKAKTAAKPKSKPMTVAKS--KAAAVKPKAA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein1.1e-3451.61Show/hide
Query:  EPVKKASKAKKPSAAKRT------------KSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSY
        +P  K  K+KK + AK T            K++ SHP + +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV LK+LVA++K+VK+K S+
Subjt:  EPVKKASKAKKPSAAKRT------------KSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSY

Query:  KLPSARS---------VKEKTAAAA--SAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKA--AAVKPK-----AAEKVKKVAPKPKPVAKPAKA
        K+PSARS         VK+K    A    +VAAA   +K   AAK   K AAK  +K    AK KA   A KPK     A  K K VA KPK   +PAKA
Subjt:  KLPSARS---------VKEKTAAAA--SAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKA--AAVKPK-----AAEKVKKVAPKPKPVAKPAKA

Query:  ARTSSRTSPGKR-AAPAAK---TKKVAAKSKKIAKSPAKKVQARKVKK
        +RTS+RTSPGK+ AAPA K   TKK  AKS K+ KSPAK+   RK KK
Subjt:  ARTSSRTSPGKR-AAPAAK---TKKVAAKSKKIAKSPAKKVQARKVKK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein1.1e-2645.65Show/hide
Query:  EPVKKASKAKKPSAAKRT------------KSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSY
        +P  K  K+KK + AK T            K++ SHP + +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV LK+LVA++K+VK+K S+
Subjt:  EPVKKASKAKKPSAAKRT------------KSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSY

Query:  KLPSARSVKEKTAAAASAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKAAAVKPKAAEKVKKVAPKPKPVAKPAKAARTSSRTSPGKR-AAPAA
        K+PSARS        A+    AAPV  K TV                                            VAKP KA+RTS+RTSPGK+ AAPA 
Subjt:  KLPSARSVKEKTAAAASAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKAAAVKPKAAEKVKKVAPKPKPVAKPAKAARTSSRTSPGKR-AAPAA

Query:  K---TKKVAAKSKKIAKSPAKKVQARKVKK
        K   TKK  AKS K+ KSPAK+   RK KK
Subjt:  K---TKKVAAKSKKIAKSPAKKVQARKVKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCGCCGCCGACGAGCTTTCCGTCGTTGAACCGGTGAAGAAAGCTTCGAAGGCTAAGAAACCGTCTGCTGCGAAGAGGACCAAATCTTCGCCGTCTCATCCTCC
TTTCTTTCAGATGATCAGCGAAGCGATCGTATCGCTGAAGGAAAGAACCGGATCGAGTCAATACGCGATTACGAAGTTCAACGAAGAGAAGCACAAGCAATTGCCGTCCA
ATTTCAGGAAGCTATTGCTCGTTCAACTGAAGAAACTAGTCGCCGCCGATAAAATCGTCAAGATCAAAAACTCCTACAAGCTTCCATCGGCGCGATCTGTGAAGGAAAAA
ACCGCCGCCGCCGCCTCCGCCGAAGTAGCAGCAGCGCCAGTCGCGTCTAAGAAGACTGTCGCCGCGAAATCGAAGGCCAAAACCGCCGCAAAACCTAAATCGAAACCTAT
GACGGTTGCCAAATCCAAGGCTGCGGCGGTGAAACCTAAGGCTGCAGAGAAGGTGAAGAAAGTTGCTCCGAAGCCAAAACCTGTAGCGAAACCTGCTAAGGCCGCGAGAA
CTTCATCGCGAACATCGCCGGGGAAGAGAGCTGCACCGGCGGCGAAGACAAAGAAGGTGGCGGCGAAGTCGAAGAAGATTGCAAAGTCTCCGGCGAAGAAAGTCCAGGCA
AGGAAAGTCAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTAGATTTAACGTTTCGAGTTCGAGCTCCATTGATTCCGATCATGTCTTCCGCCGCCGACGAGCTTTCCGTCGTTGAACCGGTGAAGAAAGCTTCGAAGGCTA
AGAAACCGTCTGCTGCGAAGAGGACCAAATCTTCGCCGTCTCATCCTCCTTTCTTTCAGATGATCAGCGAAGCGATCGTATCGCTGAAGGAAAGAACCGGATCGAGTCAA
TACGCGATTACGAAGTTCAACGAAGAGAAGCACAAGCAATTGCCGTCCAATTTCAGGAAGCTATTGCTCGTTCAACTGAAGAAACTAGTCGCCGCCGATAAAATCGTCAA
GATCAAAAACTCCTACAAGCTTCCATCGGCGCGATCTGTGAAGGAAAAAACCGCCGCCGCCGCCTCCGCCGAAGTAGCAGCAGCGCCAGTCGCGTCTAAGAAGACTGTCG
CCGCGAAATCGAAGGCCAAAACCGCCGCAAAACCTAAATCGAAACCTATGACGGTTGCCAAATCCAAGGCTGCGGCGGTGAAACCTAAGGCTGCAGAGAAGGTGAAGAAA
GTTGCTCCGAAGCCAAAACCTGTAGCGAAACCTGCTAAGGCCGCGAGAACTTCATCGCGAACATCGCCGGGGAAGAGAGCTGCACCGGCGGCGAAGACAAAGAAGGTGGC
GGCGAAGTCGAAGAAGATTGCAAAGTCTCCGGCGAAGAAAGTCCAGGCAAGGAAAGTCAAGAAATGAAAAGGTTAGTGTGTTTTTGATTAATTTCTAGGGTTTGTTTGTT
GTTAGCGATGTAAAATAGGGTACATTAGGATTGAAATCGTTGCTATAATATACTTGGTTTTCAAATTCACTTTGATGAATTCAAAGGTTCATCAGATTATTAATCTCTTT
ATCTAAGGTTGTTCAATGCTGAGATTCTGTGAGTTTGATTTATTTATTTATTTGAGTTTAAAGCTTCTATCGTAGCTTCAATGGCGGATTTCCCGTTTCAGAAGTTTTGT
TTTTGTCGATGTTTTATATCTAAATCCGTAACGTCGTTTCTCATTCCGTTGTGCGCTGTTACAATCCACGTTGGATTTAATTTTGGTTTTTTTTTAAAGAATAATTTGGG
TTTATGTTTACATT
Protein sequenceShow/hide protein sequence
MSSAADELSVVEPVKKASKAKKPSAAKRTKSSPSHPPFFQMISEAIVSLKERTGSSQYAITKFNEEKHKQLPSNFRKLLLVQLKKLVAADKIVKIKNSYKLPSARSVKEK
TAAAASAEVAAAPVASKKTVAAKSKAKTAAKPKSKPMTVAKSKAAAVKPKAAEKVKKVAPKPKPVAKPAKAARTSSRTSPGKRAAPAAKTKKVAAKSKKIAKSPAKKVQA
RKVKK