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Sed0014552 (gene) of Chayote v1 genome

Gene IDSed0014552
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:25968836..25969373
RNA-Seq ExpressionSed0014552
SyntenySed0014552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059092.1 hypothetical protein E6C27_scaffold601G00030 [Cucumis melo var. makuwa]4.5e-0754.79Show/hide
Query:  LLCDFSVHTSMPGSMRWFVVVLLAML---ARAQDSGELAPLPAMDAGTGFQLTFSAQTLMLSTFICLLVLLCH
        L+  FS+H +M     W  VV L +L   ARAQD   LAPLPAMDAGTGFQ+TFS   ++LS FI L+ LL H
Subjt:  LLCDFSVHTSMPGSMRWFVVVLLAML---ARAQDSGELAPLPAMDAGTGFQLTFSAQTLMLSTFICLLVLLCH
KGN66478.1 hypothetical protein Csa_007521 [Cucumis sativus]3.4e-0754.17Show/hide
Query:  LCDFSVHTSMPGSMRWFVVVLLAML---ARAQDSGELAPLPAMDAGTGFQLTFSAQTLMLSTFICLLVLLCH
        +  FS+H +     +W  VV L +L   ARAQD   LAPLPAMDAGTGFQ+TFS   ++LS FI L+VLL H
Subjt:  LCDFSVHTSMPGSMRWFVVVLLAML---ARAQDSGELAPLPAMDAGTGFQLTFSAQTLMLSTFICLLVLLCH
TrEMBL top hitse value%identityAlignment
A0A0A0LXI4 Uncharacterized protein1.7e-0754.17Show/hide
Query:  LCDFSVHTSMPGSMRWFVVVLLAML---ARAQDSGELAPLPAMDAGTGFQLTFSAQTLMLSTFICLLVLLCH
        +  FS+H +     +W  VV L +L   ARAQD   LAPLPAMDAGTGFQ+TFS   ++LS FI L+VLL H
Subjt:  LCDFSVHTSMPGSMRWFVVVLLAML---ARAQDSGELAPLPAMDAGTGFQLTFSAQTLMLSTFICLLVLLCH
A0A5D3D5P4 Uncharacterized protein2.2e-0754.79Show/hide
Query:  LLCDFSVHTSMPGSMRWFVVVLLAML---ARAQDSGELAPLPAMDAGTGFQLTFSAQTLMLSTFICLLVLLCH
        L+  FS+H +M     W  VV L +L   ARAQD   LAPLPAMDAGTGFQ+TFS   ++LS FI L+ LL H
Subjt:  LLCDFSVHTSMPGSMRWFVVVLLAML---ARAQDSGELAPLPAMDAGTGFQLTFSAQTLMLSTFICLLVLLCH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCCATATTGCACCAATTTTTCATATATTTATACCTCTCCCTCTTGCTTTGTGATTTTTCTGTGCACACATCAATGCCAGGATCGATGAGGTGGTTCGTGGTGGT
TCTTCTTGCAATGCTCGCGAGAGCTCAAGACAGCGGAGAACTCGCACCGTTGCCTGCTATGGATGCTGGCACTGGATTTCAGCTCACATTTTCAGCTCAAACCCTTATGC
TATCAACGTTCATCTGTCTTCTTGTGCTTCTTTGCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCTCCATATTGCACCAATTTTTCATATATTTATACCTCTCCCTCTTGCTTTGTGATTTTTCTGTGCACACATCAATGCCAGGATCGATGAGGTGGTTCGTGGTGGT
TCTTCTTGCAATGCTCGCGAGAGCTCAAGACAGCGGAGAACTCGCACCGTTGCCTGCTATGGATGCTGGCACTGGATTTCAGCTCACATTTTCAGCTCAAACCCTTATGC
TATCAACGTTCATCTGTCTTCTTGTGCTTCTTTGCCATTAGATCTCACATTCTTCCTGCACTACGATTGGATTTTGATCGTTTCTATGTATATGTTGTAATGGTGCTACC
CTTTTTTTCTTTTTCTTTCTTTTTGGCCGTGATATTATGGATTATATTTCGGTGGACTGGATCATACATGTTTTTCATATATGTAATATGAGGTATTATATCAATAAGAC
CCCGTTTGATAACCATTTTATTTTTCGTTTTTTGTTTATGAAATTTAAGCCTACAACAACTACCTTACTATACATTTTTCTTTATTTGGATATCTACA
Protein sequenceShow/hide protein sequence
MISILHQFFIYLYLSLLLCDFSVHTSMPGSMRWFVVVLLAMLARAQDSGELAPLPAMDAGTGFQLTFSAQTLMLSTFICLLVLLCH