; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014572 (gene) of Chayote v1 genome

Gene IDSed0014572
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L13, chloroplastic-like
Genome locationLG04:37944877..37948048
RNA-Seq ExpressionSed0014572
SyntenySed0014572
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.8e-12189.11Show/hide
Query:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS+    S+H TLNN N +   IPR SLV GFPLPQSKSSFLQTQ TIT  SKP+SSV Q+RAQELDRVPL+QRWM +GDE+DGPDIWNKTWYP
Subjt:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAA+HVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

KAG7037458.1 50S ribosomal protein L13, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.9e-12088.71Show/hide
Query:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS+    S+H TLNN N +   +PR SLV GFPL QSKSSFLQTQ TIT  SKP+SSV Q+RAQELDRVPL+QRWM EGDE+DGPDIWNKTWYP
Subjt:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAA+HVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]2.0e-12189.52Show/hide
Query:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS+    S+H TLNN N +   IPR SLV GFPLPQSKSSFLQTQ TIT  SKP+SSV Q+RAQELDRVPL+QRWM EGDE+DGPDIWNKTWYP
Subjt:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAA+HVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

XP_022981281.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima]2.9e-12088.71Show/hide
Query:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS+    S+H T NN N +   IPRKSLV GFPLPQSKSSFLQTQ TIT  SKP+SSV Q+RAQELDRVPL+QRWM EGDE+DGPDIWN TWYP
Subjt:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA +HVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]2.6e-12189.52Show/hide
Query:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS+    S+H TLNNGN +   +PR SLV GFPL QSKSSFLQTQ TIT  SKP+SSVLQ+RAQELDRVPL+QRWM EGDE+DGPDIWNKTWYP
Subjt:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAA+HVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A6J1C1B3 50S ribosomal protein L13, chloroplastic5.5e-11787.1Show/hide
Query:  MAMLCASSTS----VHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS++    +H T+NNG T+   IPRKSLV GFPLP SKSSFLQTQ  IT NSKP SSVLQLRAQELDRVPL+QRWM EGDELDGPDIWN TWYP
Subjt:  MAMLCASSTS----VHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAA+HVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGM VETF+QLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like3.8e-11887.5Show/hide
Query:  MAMLCASSTS----VHPTLNNG---NTTIPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS++    VH TLNNG   N  IPRKS V GFPLPQSKS  L TQ TIT NS+ +SS +Q+RAQELDRVPL+QRWM EGDELDGPDIWNKTWYP
Subjt:  MAMLCASSTS----VHPTLNNG---NTTIPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA +HVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like9.7e-12289.52Show/hide
Query:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS+    S+H TLNN N +   IPR SLV GFPLPQSKSSFLQTQ TIT  SKP+SSV Q+RAQELDRVPL+QRWM EGDE+DGPDIWNKTWYP
Subjt:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAA+HVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

A0A6J1IPT4 50S ribosomal protein L13, chloroplastic-like1.2e-11686.69Show/hide
Query:  MAMLCASSTS----VHPTLNNG---NTTIPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS++    VH TLNNG   N  I RKS V GF LPQSKS  L TQ TIT NS+ +SS +Q+RAQELDRVPL+QRWM EGDELDGPDIWNKTWYP
Subjt:  MAMLCASSTS----VHPTLNNG---NTTIPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA +HVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like1.4e-12088.71Show/hide
Query:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP
        MAMLCASS+    S+H T NN N +   IPRKSLV GFPLPQSKSSFLQTQ TIT  SKP+SSV Q+RAQELDRVPL+QRWM EGDE+DGPDIWN TWYP
Subjt:  MAMLCASST----SVHPTLNNGNTT---IPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYP

Query:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA +HVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

SwissProt top hitse value%identityAlignment
B1WQT8 50S ribosomal protein L134.7e-4968.7Show/hide
Query:  EKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPK
        ++ WYV+DATD+ LGRLA  +A  +RGK+ PTYTP +D G FVI++NA+KVAV+GRK TQKLYRRHSGRPGGM +ETF++LQQRIPERIIE AV+GMLPK
Subjt:  EKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPK

Query:  GRLGRALFNHLKVYKGPEHPHEAQKPVDLPI
          LGR LF  LKVY GP HPH+AQKP +L +
Subjt:  GRLGRALFNHLKVYKGPEHPHEAQKPVDLPI

B8HMT1 50S ribosomal protein L131.2e-4966.44Show/hide
Query:  NKTWYPKAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK  P YTPS+D G FVIVVNAEKVAV+G+KRTQK+YRRHSGRPGGM  ETF +LQ R+P
Subjt:  NKTWYPKAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIR
        ERIIEHAV+GMLPK  LGR LF  LKVY GP+HPH+AQKP  L ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIR

P12629 50S ribosomal protein L13, chloroplastic1.4e-8079.66Show/hide
Query:  LDRVPLDQRWMIEGDELDGPDIWNKTWYPKAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLY
        +  VPLDQRWM   +E  GPDIWN TWYPK+A+HV T+K WYVVDATD ILGR+ASTIA HIRGK+L +YTPSVDMGAFVIVVNA+KVAVSG+KRTQKLY
Subjt:  LDRVPLDQRWMIEGDELDGPDIWNKTWYPKAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLY

Query:  RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        RRHSGRPGG+  ETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFNHLKVYKG EHPH+AQ+P+DLP+RDKRI  E+
Subjt:  RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

Q3MF94 50S ribosomal protein L131.6e-4967.59Show/hide
Query:  NKTWYPKAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNAEKVAV+G+KRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAANHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP +L I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPI

Q9SYL9 50S ribosomal protein L13, chloroplastic9.4e-9069.8Show/hide
Query:  MAMLCASSTSVHPTLNNGNTTIPRKSLVHGFPLPQ-SKSSFLQTQITITQNSKPRSSVLQLRAQ---ELDRVPLDQRWMIEGDELDGPDIWNKTWYPKAA
        MA+LC+SST +  + +  ++   RKS   GF L   SK S    ++ I  NSK R   ++  A+       VP +QRWM + +E +GPDIWN TWYPKA+
Subjt:  MAMLCASSTSVHPTLNNGNTTIPRKSLVHGFPLPQ-SKSSFLQTQITITQNSKPRSSVLQLRAQ---ELDRVPLDQRWMIEGDELDGPDIWNKTWYPKAA

Query:  NHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVR
        +HVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPERI+EHAVR
Subjt:  NHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVR

Query:  GMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        GMLPKGRLGRALFNHLKVYKGP+HPHEAQKP+DLPIRDKRI  ++
Subjt:  GMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein6.7e-9169.8Show/hide
Query:  MAMLCASSTSVHPTLNNGNTTIPRKSLVHGFPLPQ-SKSSFLQTQITITQNSKPRSSVLQLRAQ---ELDRVPLDQRWMIEGDELDGPDIWNKTWYPKAA
        MA+LC+SST +  + +  ++   RKS   GF L   SK S    ++ I  NSK R   ++  A+       VP +QRWM + +E +GPDIWN TWYPKA+
Subjt:  MAMLCASSTSVHPTLNNGNTTIPRKSLVHGFPLPQ-SKSSFLQTQITITQNSKPRSSVLQLRAQ---ELDRVPLDQRWMIEGDELDGPDIWNKTWYPKAA

Query:  NHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVR
        +HVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPERI+EHAVR
Subjt:  NHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVR

Query:  GMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER
        GMLPKGRLGRALFNHLKVYKGP+HPHEAQKP+DLPIRDKRI  ++
Subjt:  GMLPKGRLGRALFNHLKVYKGPEHPHEAQKPVDLPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein1.2e-1838.4Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPEHPHEAQKPVD
               L++++G EHP    KP++
Subjt:  GRALFNHLKVYKGPEHPHEAQKPVD

AT3G01790.2 Ribosomal protein L13 family protein1.2e-1838.4Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPEHPHEAQKPVD
               L++++G EHP    KP++
Subjt:  GRALFNHLKVYKGPEHPHEAQKPVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCCACTTCAGTACATCCCACTCTCAACAATGGAAACACAACCATTCCCAGAAAGTCACTCGTTCATGGGTTCCCACTCCCACAATCAAA
ATCTTCTTTTCTTCAAACCCAGATCACGATTACTCAAAACTCCAAGCCGAGGAGTTCGGTCCTTCAATTGCGAGCCCAGGAGCTGGATCGCGTCCCTTTGGACCAGCGGT
GGATGATCGAGGGCGACGAACTCGACGGCCCTGACATATGGAATAAAACGTGGTACCCAAAGGCTGCAAATCATGTGAACACTGAAAAACCTTGGTATGTGGTTGATGCC
ACGGATAAGATTTTGGGAAGATTAGCTTCAACCATTGCCAATCATATCAGAGGGAAGGATTTACCAACCTACACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGTGGT
AAATGCCGAGAAAGTTGCCGTGTCGGGTAGAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACAGTAGAAACTTTTGATCAACTACAGC
AGAGAATTCCCGAAAGAATTATTGAGCATGCTGTTCGAGGTATGCTTCCGAAAGGAAGGCTTGGAAGAGCGCTTTTTAACCACTTGAAGGTTTACAAAGGGCCAGAGCAT
CCACATGAGGCACAAAAGCCAGTTGATCTTCCAATTAGGGACAAAAGGATAAACAAGGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
CTCCTCAAGACGTAAATTGGGCAAATTTATCCCTTTCGCTCGGTTTCTCATTTTCGTATTCACAAAAGCCTCTATCCACCCATTGAACACAGCGCCAGGGCTAAGCTACA
ATGGCGATGCTCTGTGCTTCCTCCACTTCAGTACATCCCACTCTCAACAATGGAAACACAACCATTCCCAGAAAGTCACTCGTTCATGGGTTCCCACTCCCACAATCAAA
ATCTTCTTTTCTTCAAACCCAGATCACGATTACTCAAAACTCCAAGCCGAGGAGTTCGGTCCTTCAATTGCGAGCCCAGGAGCTGGATCGCGTCCCTTTGGACCAGCGGT
GGATGATCGAGGGCGACGAACTCGACGGCCCTGACATATGGAATAAAACGTGGTACCCAAAGGCTGCAAATCATGTGAACACTGAAAAACCTTGGTATGTGGTTGATGCC
ACGGATAAGATTTTGGGAAGATTAGCTTCAACCATTGCCAATCATATCAGAGGGAAGGATTTACCAACCTACACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGTGGT
AAATGCCGAGAAAGTTGCCGTGTCGGGTAGAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACAGTAGAAACTTTTGATCAACTACAGC
AGAGAATTCCCGAAAGAATTATTGAGCATGCTGTTCGAGGTATGCTTCCGAAAGGAAGGCTTGGAAGAGCGCTTTTTAACCACTTGAAGGTTTACAAAGGGCCAGAGCAT
CCACATGAGGCACAAAAGCCAGTTGATCTTCCAATTAGGGACAAAAGGATAAACAAGGAAAGATAATATGAACTACGAAGAGAAAACGAACTAAGAACGAAGATCTCTTG
CCCATGGAATTTAATGTTCATAGACTCTGATTCCAGTTAGAGTTTTCATGCTTTCAGCTCAATTTCATGCCAGTATTTGATTTGTAATCTGATTCCAAATGCCAGTCTTC
TCTGACAACATGCTTAGCGTTGGCGGTATTTTCATAGTTAATATTTCAGAAGGGGAAATCTTTAAATATTGTCCTTTTGAAGACATGTTTTAAAAGGGTTAAGGCGGCCT
TGAGGCGTTCTCTCCCGGTGAAG
Protein sequenceShow/hide protein sequence
MAMLCASSTSVHPTLNNGNTTIPRKSLVHGFPLPQSKSSFLQTQITITQNSKPRSSVLQLRAQELDRVPLDQRWMIEGDELDGPDIWNKTWYPKAANHVNTEKPWYVVDA
TDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEH
PHEAQKPVDLPIRDKRINKER