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Sed0014576 (gene) of Chayote v1 genome

Gene IDSed0014576
OrganismSechium edule (Chayote v1)
Descriptionprotein NIM1-INTERACTING 1
Genome locationLG09:37343063..37343494
RNA-Seq ExpressionSed0014576
SyntenySed0014576
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593261.1 hypothetical protein SDJN03_12737, partial [Cucurbita argyrosperma subsp. sororia]4.7e-3163.78Show/hide
Query:  MEKQSLPAPAPEVATVAADG--EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKEE-
        MEKQSL      VA+ A DG  EEEMKME FFAL+RNFKEMRD+RR+ELMIGC     +AAE +++KM TV NRS WIPRFE EDF+E+F VRGPAKEE 
Subjt:  MEKQSLPAPAPEVATVAADG--EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKEE-

Query:  -TPAMMMEKKKTKVESGEDCLDLNLAL
           A++  KKK KV++ ED LDLNL+L
Subjt:  -TPAMMMEKKKTKVESGEDCLDLNLAL

KAG7025612.1 hypothetical protein SDJN02_12109, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-3062.79Show/hide
Query:  MEKQSLPAPAPEVATVAADG----EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKE
        MEKQSL      VA+ A DG    EEEMKME FFAL+RNFKEMRD+RR+ELMIGC     +AAE +++KM TV NRS WIPRFE EDF+E+F VRGPAKE
Subjt:  MEKQSLPAPAPEVATVAADG----EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKE

Query:  E--TPAMMMEKKKTKVESGEDCLDLNLAL
        E    A+   KKK KV++ ED LDLNL+L
Subjt:  E--TPAMMMEKKKTKVESGEDCLDLNLAL

XP_022960173.1 protein NIM1-INTERACTING 1 [Cucurbita moschata]8.9e-3062.6Show/hide
Query:  MEKQSLPAPAPEVATVAA----DG--EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPA
        MEKQSL      VA+ AA    DG  EEEMKME FFAL+RNFKEMRD+RR+ELMIGC+    +AAE +++KM TV NRS WIPRFE EDF+E+F VRGPA
Subjt:  MEKQSLPAPAPEVATVAA----DG--EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPA

Query:  KEE--TPAMMMEKKKTKVESGEDCLDLNLAL
        KEE    A+   KKK KV++ ED LDLNL+L
Subjt:  KEE--TPAMMMEKKKTKVESGEDCLDLNLAL

XP_023004697.1 protein NIM1-INTERACTING 1 [Cucurbita maxima]3.2e-2760.63Show/hide
Query:  MEKQSLPAPAPEVATVAAD----GEEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKE
        MEKQSL      VA    D     EEEMKME FF L+RNFKEMRD+RR+ELMI C+    +AAE ++KKM TV NRS WIPRFE EDF+E+F VRGPAKE
Subjt:  MEKQSLPAPAPEVATVAAD----GEEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKE

Query:  ETPAMMMEKKKTKVESGEDCLDLNLAL
        E  A     KK KV++ ED LDLNL+L
Subjt:  ETPAMMMEKKKTKVESGEDCLDLNLAL

XP_023514605.1 protein NIM1-INTERACTING 1 [Cucurbita pepo subsp. pepo]3.0e-3063.49Show/hide
Query:  MEKQSLPAPAPEVATVAADG---EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKEE
        MEKQSL      VA  A DG   EEEMKME FFAL+RNFKEMRD+RR+ELMIGC+    +AAE +++KM TV NRS WIPRFE EDF+E+F +RGPAKEE
Subjt:  MEKQSLPAPAPEVATVAADG---EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKEE

Query:  TPAMMMEKKKTKVESGEDCLDLNLAL
          A    KKK KV++ ED LDLNL+L
Subjt:  TPAMMMEKKKTKVESGEDCLDLNLAL

TrEMBL top hitse value%identityAlignment
A0A0A0K5V7 Uncharacterized protein5.1e-1546.27Show/hide
Query:  PAPEVATVAADGEEEMKMETFFALIRNFKEMRDRRREELMIGCE------SAAEKKRKKMTT---VPNRSTWIPRFEMEDFEEDF---------PVRGPA
        P+P+  T A D  E+ +ME FFAL+R+ KEMRD+RR+EL IG E      +A EK+RK+M     V NRSTWIP+FE EDF+E+F         P     
Subjt:  PAPEVATVAADGEEEMKMETFFALIRNFKEMRDRRREELMIGCE------SAAEKKRKKMTT---VPNRSTWIPRFEMEDFEEDF---------PVRGPA

Query:  KEETPAMMME-----KKKTKVESGEDCLDLNLAL
        K +T A         K K KV++G+  LDLNLAL
Subjt:  KEETPAMMME-----KKKTKVESGEDCLDLNLAL

A0A6J1DAZ5 protein NIM1-INTERACTING 18.1e-2153.73Show/hide
Query:  MEKQSLPAPAPEVATVAADGEEEMKMETFFALIRNFKEMRDRRREEL--MIGCESAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGP---------
        ME ++L   A E      + EEEMKME FFAL+RNFKEMRDRRR+EL  MIG     EKKRKKM T P  STWIP F  EDF+EDF VRGP         
Subjt:  MEKQSLPAPAPEVATVAADGEEEMKMETFFALIRNFKEMRDRRREEL--MIGCESAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGP---------

Query:  -AKEETPAMMME---KKKTKVESGEDCLDLNLAL
          KE+TP   +     KK  +++ E+CLDLNLAL
Subjt:  -AKEETPAMMME---KKKTKVESGEDCLDLNLAL

A0A6J1H831 protein NIM1-INTERACTING 14.3e-3062.6Show/hide
Query:  MEKQSLPAPAPEVATVAA----DG--EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPA
        MEKQSL      VA+ AA    DG  EEEMKME FFAL+RNFKEMRD+RR+ELMIGC+    +AAE +++KM TV NRS WIPRFE EDF+E+F VRGPA
Subjt:  MEKQSLPAPAPEVATVAA----DG--EEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPA

Query:  KEE--TPAMMMEKKKTKVESGEDCLDLNLAL
        KEE    A+   KKK KV++ ED LDLNL+L
Subjt:  KEE--TPAMMMEKKKTKVESGEDCLDLNLAL

A0A6J1JVD5 uncharacterized protein LOC1114881897.6e-1952.8Show/hide
Query:  PEVATVAADGEEEMKMETFFALIRNFKEMRDRRREELM--IGCESAAEKKRKKM---TTVPNRSTWIPRFEMEDFEEDFPVRGPA----------KEETP
        P   T+A + EEE++ME F+AL+RNFKE+RDR R+E++   G E+AAEK RK+M    TV N+S+WI RFE EDF+ED  V G A          KE+TP
Subjt:  PEVATVAADGEEEMKMETFFALIRNFKEMRDRRREELM--IGCESAAEKKRKKM---TTVPNRSTWIPRFEMEDFEEDFPVRGPA----------KEETP

Query:  -AMMMEKKKTKVESGEDCLDLNLAL
         A    KK+ KV SG DCLDLNL+L
Subjt:  -AMMMEKKKTKVESGEDCLDLNLAL

A0A6J1KR57 protein NIM1-INTERACTING 11.5e-2760.63Show/hide
Query:  MEKQSLPAPAPEVATVAAD----GEEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKE
        MEKQSL      VA    D     EEEMKME FF L+RNFKEMRD+RR+ELMI C+    +AAE ++KKM TV NRS WIPRFE EDF+E+F VRGPAKE
Subjt:  MEKQSLPAPAPEVATVAAD----GEEEMKMETFFALIRNFKEMRDRRREELMIGCE----SAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKE

Query:  ETPAMMMEKKKTKVESGEDCLDLNLAL
        E  A     KK KV++ ED LDLNL+L
Subjt:  ETPAMMMEKKKTKVESGEDCLDLNLAL

SwissProt top hitse value%identityAlignment
Q9FNZ5 Protein NIM1-INTERACTING 13.5e-0535.85Show/hide
Query:  EEEMKMETFFALIRNFKEMRDRRREELMIGCESAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPA-------KEETPAMMMEKKKTKVESGEDCL
        EEE K++TFF LI++++E R RRREEL    E++   +RK           +P F+ EDF +      P        KEE   +  E+ +T+  + +  L
Subjt:  EEEMKMETFFALIRNFKEMRDRRREELMIGCESAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPA-------KEETPAMMMEKKKTKVESGEDCL

Query:  DLNLAL
        DLNLAL
Subjt:  DLNLAL

Arabidopsis top hitse value%identityAlignment
AT1G02450.1 NIM1-interacting 12.5e-0635.85Show/hide
Query:  EEEMKMETFFALIRNFKEMRDRRREELMIGCESAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPA-------KEETPAMMMEKKKTKVESGEDCL
        EEE K++TFF LI++++E R RRREEL    E++   +RK           +P F+ EDF +      P        KEE   +  E+ +T+  + +  L
Subjt:  EEEMKMETFFALIRNFKEMRDRRREELMIGCESAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPA-------KEETPAMMMEKKKTKVESGEDCL

Query:  DLNLAL
        DLNLAL
Subjt:  DLNLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGCAGAGCCTGCCGGCGCCGGCTCCGGAGGTGGCGACCGTCGCCGCCGACGGCGAGGAGGAGATGAAGATGGAGACGTTTTTCGCTCTGATTAGGAATTTCAA
GGAAATGCGTGATCGGCGGAGGGAGGAGTTGATGATCGGGTGCGAATCGGCGGCGGAGAAGAAGAGGAAGAAGATGACGACGGTGCCGAATCGGTCCACGTGGATTCCGA
GGTTTGAGATGGAGGATTTTGAGGAGGATTTTCCGGTGAGAGGACCGGCGAAGGAAGAGACGCCGGCGATGATGATGGAGAAGAAGAAGACGAAAGTGGAAAGTGGAGAG
GATTGTTTGGATCTTAATCTTGCTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ACGCAAACAGCGTGAGTAAACTTTTTCAGTTTCTTTTTCTTTGTTTGCACGAAACTTGCGTTTCAAGCGAAAATGGAAAAGCAGAGCCTGCCGGCGCCGGCTCCGGAGGT
GGCGACCGTCGCCGCCGACGGCGAGGAGGAGATGAAGATGGAGACGTTTTTCGCTCTGATTAGGAATTTCAAGGAAATGCGTGATCGGCGGAGGGAGGAGTTGATGATCG
GGTGCGAATCGGCGGCGGAGAAGAAGAGGAAGAAGATGACGACGGTGCCGAATCGGTCCACGTGGATTCCGAGGTTTGAGATGGAGGATTTTGAGGAGGATTTTCCGGTG
AGAGGACCGGCGAAGGAAGAGACGCCGGCGATGATGATGGAGAAGAAGAAGACGAAAGTGGAAAGTGGAGAGGATTGTTTGGATCTTAATCTTGCTCTCTAA
Protein sequenceShow/hide protein sequence
MEKQSLPAPAPEVATVAADGEEEMKMETFFALIRNFKEMRDRRREELMIGCESAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKEETPAMMMEKKKTKVESGE
DCLDLNLAL