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Sed0014592 (gene) of Chayote v1 genome

Gene IDSed0014592
OrganismSechium edule (Chayote v1)
DescriptionLYR motif-containing protein At3g19508
Genome locationLG07:9649342..9650003
RNA-Seq ExpressionSed0014592
SyntenySed0014592
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140718.1 LYR motif-containing protein At3g19508 [Cucumis sativus]7.0e-3485.19Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICH
        MEKALR+YGEVLRLV++LPKD+RPYYAKY RENFVNYRE+DA DAKSL+ELFHRAY+HSLW+LNKYSVDGSAADKL+EIC+
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICH
XP_008456173.1 PREDICTED: LYR motif-containing protein At3g19508 [Cucumis melo]5.7e-3689.02Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
        MEKALR+YGEVLRLV+RLPKD+RPYYAKYARENFVNYRE+DANDAKSL+ELFHRAY+HSLW+LNKYSVDGSAADKL+EIC+S
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
XP_022149201.1 LYR motif-containing protein At3g19508 [Momordica charantia]2.4e-3491.25Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREIC
        MEKALRIYG VLRLV+RLPKDSRPYYAKYARENFVNYRE+DANDAKSLQELFHRAY+HS+W+LNKYSVD SAADKLREIC
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREIC
XP_022941949.1 LYR motif-containing protein At3g19508 [Cucurbita moschata]1.1e-3487.8Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
        MEKALRIY EVLRLV+RLPKDSRPYYAKYARENFVNYRE+DANDAKSL+ELFHRAY+HS+W+LNKYSV+GSAADKL+EIC+S
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
XP_038898400.1 LYR motif-containing protein At3g19508 [Benincasa hispida]3.3e-3691.46Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
        MEKALRIYGEVLRLV+RLPKDSRPYYAKYARENFVNYRE+DANDAKSL+ELFHRAY HSLW+LNKYSVDGSAADKL+EIC+S
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
TrEMBL top hitse value%identityAlignment
A0A1S3C3W4 LYR motif-containing protein At3g195082.8e-3689.02Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
        MEKALR+YGEVLRLV+RLPKD+RPYYAKYARENFVNYRE+DANDAKSL+ELFHRAY+HSLW+LNKYSVDGSAADKL+EIC+S
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
A0A5A7T6G8 LYR motif-containing protein2.8e-3689.02Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
        MEKALR+YGEVLRLV+RLPKD+RPYYAKYARENFVNYRE+DANDAKSL+ELFHRAY+HSLW+LNKYSVDGSAADKL+EIC+S
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
A0A6J1D7N7 LYR motif-containing protein At3g195081.2e-3491.25Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREIC
        MEKALRIYG VLRLV+RLPKDSRPYYAKYARENFVNYRE+DANDAKSLQELFHRAY+HS+W+LNKYSVD SAADKLREIC
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREIC
A0A6J1FPX9 LYR motif-containing protein At3g195085.2e-3587.8Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
        MEKALRIY EVLRLV+RLPKDSRPYYAKYARENFVNYRE+DANDAKSL+ELFHRAY+HS+W+LNKYSV+GSAADKL+EIC+S
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
A0A6J1J656 LYR motif-containing protein At3g195083.4e-3486.59Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
        MEKALRIY EVLRLV+RLPKDSRPYYAKYARENFVNYRE+DANDAKSL+ELF+RAY+HS+W+LNKYSV+GSAADKL+EIC+S
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS
SwissProt top hitse value%identityAlignment
A9SNJ1 LYR motif-containing protein PHYPADRAFT_1868635.0e-1155.17Show/hide
Query:  YGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNK
        Y EVL+LVKRLP  SR YYA+YARENFV Y E++  D +S++ L  R + H+ W+L K
Subjt:  YGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNK
Q1G3M2 LYR motif-containing protein At3g195082.9e-2771.25Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREIC
        M+K LR+YG V+RLV+ LP DSRPYYAKYARENFVNYRE+D ++  SL ELF RAY+HSLW+L KYS+D SAA KL+EIC
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREIC
Arabidopsis top hitse value%identityAlignment
AT3G19508.1 unknown protein2.1e-2871.25Show/hide
Query:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREIC
        M+K LR+YG V+RLV+ LP DSRPYYAKYARENFVNYRE+D ++  SL ELF RAY+HSLW+L KYS+D SAA KL+EIC
Subjt:  MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREIC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCGCTGAGAATATACGGCGAAGTTCTCCGGCTGGTGAAGCGGCTGCCGAAGGACTCCAGGCCTTACTACGCCAAGTACGCCCGAGAGAATTTCGTCAATTA
CAGAGAAATCGATGCCAACGACGCCAAATCCCTACAAGAACTCTTCCACAGAGCTTACGATCACTCCCTTTGGATTCTCAACAAGTATTCGGTGGATGGATCTGCGGCGG
ATAAACTGAGGGAGATCTGTCATAGTTAG
mRNA sequenceShow/hide mRNA sequence
GGAAACAAAAGCACTAGATCGAGAAATCGAGAAGCAGACGGCGGATCGGAGAGAAATGGAGAAGGCGCTGAGAATATACGGCGAAGTTCTCCGGCTGGTGAAGCGGCTGC
CGAAGGACTCCAGGCCTTACTACGCCAAGTACGCCCGAGAGAATTTCGTCAATTACAGAGAAATCGATGCCAACGACGCCAAATCCCTACAAGAACTCTTCCACAGAGCT
TACGATCACTCCCTTTGGATTCTCAACAAGTATTCGGTGGATGGATCTGCGGCGGATAAACTGAGGGAGATCTGTCATAGTTAGTGTGCGCTTTGTGTTTGCAATTTTCT
TGAAATAATGCCTCTAAGGAATCGGCATCGGTTATTACACGTGAAACTCCGGCTGCCGCCGCCGTGGATTCTGATGAAGTCGTCGCCGGTACGATATTAGAGAATTGTTT
ATTTAAGAAGAAATACATTAGGTGAATTTATCTGTTCTTGGATCATCCTTTTATGTAAAATAAAGAAAATTTTCAGCCTGAATCGAATTTAAAACTTATCCAAGTTAATA
TTCTTTCAGTATCATTTTCTTCTTTC
Protein sequenceShow/hide protein sequence
MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS