CuGenDBv2

Gene ID	Sed0014614
Organism	Sechium edule (Chayote v1)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Genome location	LG11:31173434..31178871
RNA-Seq Expression	Sed0014614
Synteny	Sed0014614
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0016363 - nuclear matrix (cellular component) GO:0032040 - small-subunit processome (cellular component) GO:0034457 - Mpp10 complex (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0030515 - snoRNA binding (molecular function) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579112.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. sororia]

5.2e-148

89.76

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKP PTELRNEE ALRKEIELEDD T VPR HIDDEYANAS+IDPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVI++IIE C AHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIK +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD
        RTAN+LKHLFPVPKPD+KRVVTFANQSDY+SFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

KAG7016636.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.2e-148

89.76

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKP PTELRNEE ALRKEIELEDD T VPR HIDDEYANAS+IDPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVI++IIE C AHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIK +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD
        RTAN+LKHLFPVPKPD+KRVVTFANQSDY+SFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

XP_022157893.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia]

1.4e-148

89.42

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKPIPTELRNEE ALRKEIELEDD+T VPR HIDDEYAN SE+DPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVIS+IIE C AHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIK +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD
        RTANILKHLFPVPKPD+KRV+TFANQSDY+SFRHHIYEKQGG KSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

XP_022939256.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata]

5.2e-148

89.76

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKP PTELRNEE ALRKEIELEDD T VPR HIDDEYANAS+IDPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVI++IIE C AHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIK +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD
        RTAN+LKHLFPVPKPD+KRVVTFANQSDY+SFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

XP_022993779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]

1.4e-148

90.1

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKP PTELRNEE ALRKEIELEDD T VPR HIDDEYANAS+IDPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVI++IIE C AHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIK +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD
        RTAN+LKHLFPVPKPD+KRVVTFANQSDY+SFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPI1 U3 small nucleolar ribonucleoprotein protein IMP4

6.2e-147

89.38

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKP PTELRNEE ALRKEIELED+ T VPR HIDDEYANASE+DPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVIS+IIE C AHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+ +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLG
        RTANILKHLFPVPKPD+KRVVTFANQSDY+SFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLG

A0A5D3BJ53 U3 small nucleolar ribonucleoprotein IMP4

6.2e-147

89.38

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKP PTELRNEE ALRKEIELED+ T VPR HIDDEYANASE+DPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVIS+IIE C AHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+ +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLG
        RTANILKHLFPVPKPD+KRVVTFANQSDY+SFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLG

A0A6J1DUL2 U3 small nucleolar ribonucleoprotein protein IMP4

6.6e-149

89.42

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKPIPTELRNEE ALRKEIELEDD+T VPR HIDDEYAN SE+DPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVIS+IIE C AHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIK +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD
        RTANILKHLFPVPKPD+KRV+TFANQSDY+SFRHHIYEKQGG KSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

A0A6J1FFE4 U3 small nucleolar ribonucleoprotein protein IMP4

2.5e-148

89.76

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKP PTELRNEE ALRKEIELEDD T VPR HIDDEYANAS+IDPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVI++IIE C AHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIK +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD
        RTAN+LKHLFPVPKPD+KRVVTFANQSDY+SFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

A0A6J1K117 U3 small nucleolar ribonucleoprotein protein IMP4

6.6e-149

90.1

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L REYLY KSLEGKERL+YEKKRKI+EALE GKP PTELRNEE ALRKEIELEDD T VPR HIDDEYANAS+IDPKILITTSRDPSA LTQF
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELKIVFPNAQ+MNRGGQVI++IIE C AHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIK +KAMGTMP+AYPHI+LNNFTTKLGE
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD
        RTAN+LKHLFPVPKPD+KRVVTFANQSDY+SFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ EAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

SwissProt top hits

e value

%identity

Alignment

Q0VD01 U3 small nucleolar ribonucleoprotein protein IMP4

3.2e-84

53.77

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR ++L REYLY K+ E  ER   E+K K++ ALE  + IPTELR E  AL+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELK+VFP AQ+MNRG   +  ++ AC A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I     +GT  +A PH++++ F+++LG+
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL
        R ++IL++LFPVPK DS+RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL

Q5PQR5 U3 small nucleolar ribonucleoprotein protein IMP4

6.5e-85

54.45

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR ++L REYLY K+ E  +R V EKK ++K ALE  + IPTELR E  AL+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELK+VFP AQ+MNRG   +  ++ AC A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I     +GTM +A PH++ + F+++LG+
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL
        R ++IL++LFPVPK DS RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL

Q5R947 U3 small nucleolar ribonucleoprotein protein IMP4

9.4e-84

53.42

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR ++L REYLY K+ E  +R   E+K +++ ALE  + IPTELR E  AL+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELK+VFP AQ+MNRG   +  ++ AC A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I     +GTM +A PH++ + F+++LG+
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL
        R ++IL++LFPVPK DS RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL

Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4

6.5e-85

54.45

Show/hide

Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR ++L REYLY K+ E  +R V EKK ++K ALE  + IPTELR E  AL+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELK+VFP AQ+MNRG   +  ++ AC A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I     +GTM +A PH++ + F+++LG+
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL
        R ++IL++LFPVPK DS RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL

Q96G21 U3 small nucleolar ribonucleoprotein protein IMP4

9.4e-84

53.42

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Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR ++L REYLY K+ E  +R   E+K +++ ALE  + IPTELR E  AL+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
        AKELK+VFP AQ+MNRG   +  ++ AC A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I     +GTM +A PH++ + F+++LG+
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL
        R ++IL++LFPVPK DS RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQ-MEAQNEWVIRPYMKTTKKRQFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

5.0e-125

71.77

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Query:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF
        M RR  +L +EY+Y KSLEG ER VYE+KR I+EAL+ GKPIPTELRN E  LR+EI+LED +T VPR HIDDEYANA+E DPKIL+TTSR+PSA L +F
Subjt:  MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQF

Query:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE
         KELK VFPN+Q++NRG QVIS+IIE   +H+FTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRH+I  +K++G MP+ YPH++ NNFTT++G+
Subjt:  AKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGE

Query:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEK-QGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD
        R  NILKH+FP PK D+KR+VTF+NQSDY+SFR+H+Y+K +GG KSIELKEIGPRFELRLYQ+KLGTV+Q EA+ EWVIRPYM T+KKR+F+G+
Subjt:  RTANILKHLFPVPKPDSKRVVTFANQSDYVSFRHHIYEK-QGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

AT4G01560.1 Ribosomal RNA processing Brix domain protein

2.5e-39

35.69

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Query:  RRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIE-LEDDHTTVPRKHIDDEYANAS----------EIDPKILITTSRD
        +RS++  +  + K LE K++ +  +    K ALE+G+  P ++      + K IE   +   TV R   ++ +A+            EI PK+L+TT R 
Subjt:  RRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIE-LEDDHTTVPRKHIDDEYANAS----------EIDPKILITTSRD

Query:  PSASLTQFAKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLN
         S        EL  V PN+    RG   +  I+E     +FT +I+VH +R  PD L+I  LP GPTA+F L N+V R +IK     G      P ++LN
Subjt:  PSASLTQFAKELKIVFPNAQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLN

Query:  NFTTKLGERTANILKHLFPVPKPD--SKRVVTFANQSDYVSFRHHIY--------EKQGGAKSIE--LKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRP
        NFTT+LG R     + LFP P P+   +RVVTF NQ D++ FRHH Y          +G  ++I+  L+E GPRF L+L  ++ GT D    + EWV +P
Subjt:  NFTTKLGERTANILKHLFPVPKPD--SKRVVTFANQSDYVSFRHHIY--------EKQGGAKSIE--LKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRP

Query:  YMKTTKKRQFL
         M T+++R FL
Subjt:  YMKTTKKRQFL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGCGAAGAAGAAGTCAACTAATGAGAGAGTATTTGTACTGTAAGAGTTTAGAAGGCAAGGAGCGTTTGGTATATGAGAAGAAGCGAAAGATTAAAGAAGCCCTTGA
AGTGGGGAAACCTATTCCTACTGAACTCCGTAACGAGGAGGGAGCACTTCGTAAAGAAATTGAACTCGAGGATGATCACACGACAGTTCCAAGGAAACATATTGATGATG
AGTATGCGAATGCTTCAGAAATTGATCCTAAAATTTTGATAACTACATCTCGGGATCCAAGTGCATCTTTAACACAGTTTGCAAAGGAATTAAAAATTGTTTTTCCCAAT
GCACAACAAATGAATCGTGGTGGTCAGGTGATCTCAGATATTATAGAGGCCTGCCTAGCTCACGAATTTACAGATGTTATTTTAGTTCATGAACATCGAGGTGTGCCAGA
TGGTTTGATTATCAGCCATCTTCCTTTTGGTCCAACTGCATATTTTGGATTGTTGAATGTGGTTACCAGACATGAAATTAAGGCCAGAAAAGCGATGGGAACGATGCCTC
AAGCCTACCCGCATATACTTTTGAACAATTTTACCACAAAGTTGGGTGAAAGGACGGCCAACATCTTAAAGCATCTATTTCCTGTACCGAAGCCAGACTCCAAACGTGTG
GTTACTTTTGCTAATCAGTCTGATTATGTTTCATTCAGGCATCATATTTATGAGAAGCAGGGAGGTGCTAAATCAATTGAGCTGAAGGAGATTGGTCCTCGGTTTGAATT
GCGACTGTACCAGATCAAGTTGGGAACCGTTGATCAAATGGAAGCTCAGAACGAATGGGTGATTAGACCATACATGAAAACAACCAAGAAACGCCAGTTCCTTGGTGATT
GA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MWRRRSQLMREYLYCKSLEGKERLVYEKKRKIKEALEVGKPIPTELRNEEGALRKEIELEDDHTTVPRKHIDDEYANASEIDPKILITTSRDPSASLTQFAKELKIVFPN
AQQMNRGGQVISDIIEACLAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKARKAMGTMPQAYPHILLNNFTTKLGERTANILKHLFPVPKPDSKRV
VTFANQSDYVSFRHHIYEKQGGAKSIELKEIGPRFELRLYQIKLGTVDQMEAQNEWVIRPYMKTTKKRQFLGD

Sed0014614 (gene) of Chayote v1 genome