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Sed0014616 (gene) of Chayote v1 genome

Gene IDSed0014616
OrganismSechium edule (Chayote v1)
DescriptionSerine-rich family protein
Genome locationLG03:8495000..8495305
RNA-Seq ExpressionSed0014616
SyntenySed0014616
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577543.1 hypothetical protein SDJN03_25117, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1756.57Show/hide
Query:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAMEGSTE
        M+ +  + KQ  T+  + T KS+  EL+ DD KKNA     +MT+SPSA+S+CLCSPTTH+GSFRCR HR +AISRG S  SNLSDL QK  A+E S E
Subjt:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAMEGSTE

KAG7015599.1 hypothetical protein SDJN02_23235, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1856.44Show/hide
Query:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAMEGSTEG
        M+ +  + KQ  T+  + T KS+  EL+ DD KKNA     +MT+SPSA+S+CLCSPTTH+GSFRCR HR +AISRG S  SNLSDL QK  A+E S EG
Subjt:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAMEGSTEG

Query:  Q
        +
Subjt:  Q

KGN55991.1 hypothetical protein Csa_011649 [Cucumis sativus]4.3e-2569Show/hide
Query:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNA-----PRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAME
        MD +R Q KQ KT+ KT T KS+  E +FDDLKKNA     P AL+RMTKS S KS+CLCSPTTHIGSFRCRRHRS++ISRG S+ SNLSDLVQK  AME
Subjt:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNA-----PRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAME

TYK19387.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]5.6e-2568Show/hide
Query:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNA-----PRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAME
        MD +R  SKQ KT+ KT T KS+  E +FDDLKKNA     P AL+RMTKSPS KS+CLCSPTTHIGSFRCRRHRS+A+SRG+S+ SNLSDL QK   ME
Subjt:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNA-----PRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAME

XP_022143490.1 uncharacterized protein LOC111013367 [Momordica charantia]1.4e-2362.86Show/hide
Query:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKN------APRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAM
        MD +  + KQ K + KT T KS+  ELD D+LKK+      +P AL+RM+KSPS KS+CLCSPTTHIGSFRCRRHRS+AISRG S+ SNLSDL QK  AM
Subjt:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKN------APRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAM

Query:  EGSTE
        E S E
Subjt:  EGSTE

TrEMBL top hitse value%identityAlignment
A0A0A0L7C7 Uncharacterized protein2.1e-2569Show/hide
Query:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNA-----PRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAME
        MD +R Q KQ KT+ KT T KS+  E +FDDLKKNA     P AL+RMTKS S KS+CLCSPTTHIGSFRCRRHRS++ISRG S+ SNLSDLVQK  AME
Subjt:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNA-----PRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAME

A0A2P5A8U7 Uncharacterized protein3.4e-1246.67Show/hide
Query:  RMQSKQAKTDYKTRTPKSSFSELDFDDLKKN------APRAL--TRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAMEG
        R  S Q   +YK   P     E++ ++LKK+      +PR +    +TKS S + +CLCSPTTH GSFRCR HRSS ++RGSS+ SNLS+L +K GA+  
Subjt:  RMQSKQAKTDYKTRTPKSSFSELDFDDLKKN------APRAL--TRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAMEG

Query:  STEGQ
        S E Q
Subjt:  STEGQ

A0A5D3D753 Putative PGPS/D10 protein2.7e-2568Show/hide
Query:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNA-----PRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAME
        MD +R  SKQ KT+ KT T KS+  E +FDDLKKNA     P AL+RMTKSPS KS+CLCSPTTHIGSFRCRRHRS+A+SRG+S+ SNLSDL QK   ME
Subjt:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNA-----PRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAME

A0A6J1CNY2 uncharacterized protein LOC1110133676.6e-2462.86Show/hide
Query:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKN------APRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAM
        MD +  + KQ K + KT T KS+  ELD D+LKK+      +P AL+RM+KSPS KS+CLCSPTTHIGSFRCRRHRS+AISRG S+ SNLSDL QK  AM
Subjt:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKN------APRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAM

Query:  EGSTE
        E S E
Subjt:  EGSTE

W9SBP1 Uncharacterized protein2.4e-1348.39Show/hide
Query:  KQAKTDYKTRTPKSSFSELDFDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAMEGSTEGQ
        K+   ++K + P  + +EL        +PRA   +TKS S + +CLCSPTTH GSFRCR HRSS + RG S+ SNLS+L +KPGA+  S E Q
Subjt:  KQAKTDYKTRTPKSSFSELDFDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAMEGSTEGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein2.8e-0648.84Show/hide
Query:  KSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSN-LSDLVQKP
        K+ C+CSPTTH GSF+C+ HR+ ++ R  S+++N L  L+ KP
Subjt:  KSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSN-LSDLVQKP

AT1G67910.1 unknown protein7.3e-0746.88Show/hide
Query:  FDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSID-SNLSDLVQKP
        F+   +   R L+R T     K++CLCSPTTH GSFRCR HRS ++ R  SI+ ++L D   KP
Subjt:  FDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSID-SNLSDLVQKP

AT1G67910.2 unknown protein7.3e-0746.88Show/hide
Query:  FDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSID-SNLSDLVQKP
        F+   +   R L+R T     K++CLCSPTTH GSFRCR HRS ++ R  SI+ ++L D   KP
Subjt:  FDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSID-SNLSDLVQKP

AT3G13227.1 serine-rich protein-related1.3e-0860.42Show/hide
Query:  MTKSPSAKSSCLCSPTTHIGSFRCRRHRSSA---ISRGSSIDSNLSDL
        M+KS S + +CLC+PTTH GSFRCR HR +A   +SRG+S+ SNLS L
Subjt:  MTKSPSAKSSCLCSPTTHIGSFRCRRHRSSA---ISRGSSIDSNLSDL

AT5G55980.1 serine-rich protein-related1.5e-0737.08Show/hide
Query:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNAPRALT-RMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLV
        + Q + Q K + +  K     S  S ++      N+P     R +   S + +CLCSPTTH GSFRCR HR  +++R  SI SNL+ L+
Subjt:  MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNAPRALT-RMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAATGAGGATGCAATCAAAACAGGCGAAGACAGACTACAAGACGCGGACGCCAAAGTCGTCGTTCTCGGAGTTGGACTTCGACGATCTGAAGAAGAATGCGCC
GAGAGCATTAACGAGGATGACGAAGTCGCCGAGCGCTAAATCAAGCTGCCTGTGCTCTCCGACAACTCACATTGGATCGTTCCGCTGCCGGCGCCACCGAAGCAGTGCCA
TCTCCCGCGGTAGCTCCATCGACTCCAACCTCTCCGATCTCGTTCAGAAACCGGGGGCGATGGAGGGTTCGACGGAAGGTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCAAATGAGGATGCAATCAAAACAGGCGAAGACAGACTACAAGACGCGGACGCCAAAGTCGTCGTTCTCGGAGTTGGACTTCGACGATCTGAAGAAGAATGCGCC
GAGAGCATTAACGAGGATGACGAAGTCGCCGAGCGCTAAATCAAGCTGCCTGTGCTCTCCGACAACTCACATTGGATCGTTCCGCTGCCGGCGCCACCGAAGCAGTGCCA
TCTCCCGCGGTAGCTCCATCGACTCCAACCTCTCCGATCTCGTTCAGAAACCGGGGGCGATGGAGGGTTCGACGGAAGGTCAGTAG
Protein sequenceShow/hide protein sequence
MDQMRMQSKQAKTDYKTRTPKSSFSELDFDDLKKNAPRALTRMTKSPSAKSSCLCSPTTHIGSFRCRRHRSSAISRGSSIDSNLSDLVQKPGAMEGSTEGQ