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Sed0014638 (gene) of Chayote v1 genome

Gene IDSed0014638
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG01:1772442..1772819
RNA-Seq ExpressionSed0014638
SyntenySed0014638
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2051186.1 hypothetical protein ES319_A12G039100v1 [Gossypium barbadense]3.8e-3157.94Show/hide
Query:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR
        MEWL PRRRGP+WKQGW+GQTL S+SSPP  L+TIFGIV+VLL FSQ   + A ++ SA NFQL L LLP+L++F M S+S  G F F  R+L   +   
Subjt:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR

Query:  G-ASPWTIAILVPLILVLLYFQPSFH
           SPW IA+LV L+ VLL++Q SFH
Subjt:  G-ASPWTIAILVPLILVLLYFQPSFH

KAF3434655.1 hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis]1.2e-3261.11Show/hide
Query:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSY-SLGGLFNFRFRQLATRSTR
        MEW  P+RRGPEWKQGW GQTL S+S+PP  LLTIFGIVIVLL FSQ  G++AQ+ ++  NFQL L +LPIL+IF M+ Y S GG FNF+ R+      R
Subjt:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSY-SLGGLFNFRFRQLATRSTR

Query:  RGASPWTIAILVPLILVLLYFQPSFH
         G SPW +AIL+ L+LVLL +Q SFH
Subjt:  RGASPWTIAILVPLILVLLYFQPSFH

KAG7010871.1 hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-4275.59Show/hide
Query:  MEWLQPRRRGPEWKQGWAGQTL-NSVSSPPPQLLTIFGIVIVLLCFSQN-KGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRST
        MEWL+P+RRGPEWKQ W GQTL  SVSSPPPQLLTIFGIVIVLL FSQ+  G++ QM+RSA+NFQL LFLLPILVIF MSSYS+ GL N R  + AT S 
Subjt:  MEWLQPRRRGPEWKQGWAGQTL-NSVSSPPPQLLTIFGIVIVLLCFSQN-KGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRST

Query:  RRGASPWTIAILVPLILVLLYFQPSFH
        RRGASP TI ILV LILVLLYF+PSFH
Subjt:  RRGASPWTIAILVPLILVLLYFQPSFH

KDP27587.1 hypothetical protein JCGZ_19592 [Jatropha curcas]3.4e-3258.27Show/hide
Query:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTR-
        MEW  P+RRGP+WKQGWAGQT+NS+S+PPP LLTIFGIVI+LL  SQ  G++AQ+  SA NFQL +FLLPIL+I +++  S   +  FR RQ    S R 
Subjt:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTR-

Query:  -RGASPWTIAILVPLILVLLYFQPSFH
          G+SPW +AI V ++LVLL +Q SFH
Subjt:  -RGASPWTIAILVPLILVLLYFQPSFH

KGN61894.1 hypothetical protein Csa_005908 [Cucumis sativus]1.2e-3267.97Show/hide
Query:  MEWLQPRRRGPEWKQG--WAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQ-NKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRS
        M+   P+RRGPEWK+G    GQTL+SVS PP QLL IFGIVIVLL FSQ N GHEAQ+ RS   FQL LFLLPI VIF M SYS   L NF FR+  T  
Subjt:  MEWLQPRRRGPEWKQG--WAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQ-NKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRS

Query:  TRRGASPWTIAILVPLILVLLYFQPSFH
         +RGASPWTIAILV LILVLLY+Q SFH
Subjt:  TRRGASPWTIAILVPLILVLLYFQPSFH

TrEMBL top hitse value%identityAlignment
A0A067JUL1 Uncharacterized protein1.7e-3258.27Show/hide
Query:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTR-
        MEW  P+RRGP+WKQGWAGQT+NS+S+PPP LLTIFGIVI+LL  SQ  G++AQ+  SA NFQL +FLLPIL+I +++  S   +  FR RQ    S R 
Subjt:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTR-

Query:  -RGASPWTIAILVPLILVLLYFQPSFH
          G+SPW +AI V ++LVLL +Q SFH
Subjt:  -RGASPWTIAILVPLILVLLYFQPSFH

A0A0A0LLH8 Uncharacterized protein5.7e-3367.97Show/hide
Query:  MEWLQPRRRGPEWKQG--WAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQ-NKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRS
        M+   P+RRGPEWK+G    GQTL+SVS PP QLL IFGIVIVLL FSQ N GHEAQ+ RS   FQL LFLLPI VIF M SYS   L NF FR+  T  
Subjt:  MEWLQPRRRGPEWKQG--WAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQ-NKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRS

Query:  TRRGASPWTIAILVPLILVLLYFQPSFH
         +RGASPWTIAILV LILVLLY+Q SFH
Subjt:  TRRGASPWTIAILVPLILVLLYFQPSFH

A0A1Q3DG80 Uncharacterized protein2.4e-3154.76Show/hide
Query:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR
        MEW   +RRGPEWKQGW GQT+ S+S+PP  LLT+FGIVIVLL  SQ   + +Q++ +A NF+L++FLLPIL+IF M+++S  G +NF+  ++   + +R
Subjt:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR

Query:  -GASPWTIAILVPLILVLLYFQPSFH
         G SPW +AILV L+LVLL +Q SFH
Subjt:  -GASPWTIAILVPLILVLLYFQPSFH

A0A2P5YQK7 Uncharacterized protein1.8e-3157.94Show/hide
Query:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR
        MEWL PRRRGP+WKQGW+GQTL S+SSPP  L+TIFGIV+VLL FSQ   + A ++ SA NFQL L LLP+L++F M S+S  G F F  R+L   +   
Subjt:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR

Query:  G-ASPWTIAILVPLILVLLYFQPSFH
           SPW IA+LV L+ VLL++Q SFH
Subjt:  G-ASPWTIAILVPLILVLLYFQPSFH

A0A6P6AE81 uncharacterized protein LOC1113087732.4e-3157.94Show/hide
Query:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR
        MEW+ PRRRGP+WKQGW GQTL+SVS+PP  LLTIFGIV+VLL  SQ  G++A+++ +A NFQL + +LPIL+IF M S+S  G   F  ++L   +  R
Subjt:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR

Query:  -GASPWTIAILVPLILVLLYFQPSFH
         G SPW IAILV ++LVLL +Q SFH
Subjt:  -GASPWTIAILVPLILVLLYFQPSFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42146.1 unknown protein4.5e-1433.85Show/hide
Query:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGG--LFNFRFRQLATRST
        M W    RRG  WK+GW  +TL + S+PP  LL +  I+ +LL  S    ++ ++ ++AAN +L +  LPIL +FV+ S S     LF   +   A ++ 
Subjt:  MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGG--LFNFRFRQLATRST

Query:  R---RGASPWTIAILVPLILVLLYFQPSFH
             G  PW + +++ L+L+L+  Q  FH
Subjt:  R---RGASPWTIAILVPLILVLLYFQPSFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGTTACAACCAAGGAGGAGAGGTCCAGAGTGGAAGCAAGGATGGGCAGGCCAAACCCTAAATTCTGTTTCTTCCCCACCACCTCAATTGCTAACAATTTTTGG
CATTGTCATTGTCCTTCTTTGCTTCTCTCAGAACAAAGGCCATGAAGCTCAAATGTATAGGTCAGCTGCCAATTTTCAGCTGGCTCTTTTCTTGTTGCCCATTTTGGTAA
TTTTTGTCATGTCTTCATATTCCCTCGGTGGACTGTTTAACTTTCGATTTCGGCAACTGGCCACCAGGTCGACTCGACGAGGTGCCTCACCTTGGACCATTGCCATTTTG
GTCCCTCTCATTCTGGTTTTGCTTTATTTCCAACCCTCGTTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTGGTTACAACCAAGGAGGAGAGGTCCAGAGTGGAAGCAAGGATGGGCAGGCCAAACCCTAAATTCTGTTTCTTCCCCACCACCTCAATTGCTAACAATTTTTGG
CATTGTCATTGTCCTTCTTTGCTTCTCTCAGAACAAAGGCCATGAAGCTCAAATGTATAGGTCAGCTGCCAATTTTCAGCTGGCTCTTTTCTTGTTGCCCATTTTGGTAA
TTTTTGTCATGTCTTCATATTCCCTCGGTGGACTGTTTAACTTTCGATTTCGGCAACTGGCCACCAGGTCGACTCGACGAGGTGCCTCACCTTGGACCATTGCCATTTTG
GTCCCTCTCATTCTGGTTTTGCTTTATTTCCAACCCTCGTTCCATTGA
Protein sequenceShow/hide protein sequence
MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRRGASPWTIAIL
VPLILVLLYFQPSFH