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Sed0014668 (gene) of Chayote v1 genome

Gene IDSed0014668
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand
Genome locationLG10:29407020..29407660
RNA-Seq ExpressionSed0014668
SyntenySed0014668
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]6.6e-3379.12Show/hide
Query:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL
        MGN+KS  YKR LVPF++EQLANVFK+HDRDGDG LTKEELKQAF+YLGS F +FRV+EALRAAD NGDG ISMDEM +LIKY KTRKYT+
Subjt:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL

KAG6585663.1 hypothetical protein SDJN03_18396, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3284.71Show/hide
Query:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTK
        MGNAKST YKR LVPFT+EQLA +FKSHDRDGDG+L+KEELKQAF YLGS F SFRVKEALRAAD NGDGFISMDEM +LIKYTK
Subjt:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTK

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3075.82Show/hide
Query:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL
        MGN+KS  YKR LVPF++EQLA+VFK+HD DGDG+LTKEELKQAF YLGS F SFRV+EALRAAD +GDGFISM EM +LI+Y K+RKYTL
Subjt:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL

KAG7020566.1 hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3284.71Show/hide
Query:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTK
        MGNAKST YKR LVPFT+EQLA +FKSHDRDGDG+L+KEELKQAF YLGS F SFRVKEALRAAD NGDGFISMDEM +LIKYTK
Subjt:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTK

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-3584.62Show/hide
Query:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL
        MGNAKST YKR LVPFT+EQLA +FKSHDRDGDG+L+KEELKQAF YLGS F SFRVKEALRAAD NGDGFISMDEM +LIKYTK RKYTL
Subjt:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL

TrEMBL top hitse value%identityAlignment
A0A0A0LRB6 Uncharacterized protein2.2e-3480.22Show/hide
Query:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL
        MGN+KS  YKR LVPF++EQLANVFK+HDRDGDG LTKEELKQAF+YLGS FC+FRV+EALRAAD NGDG ISMDEM +LIKY KTRKYT+
Subjt:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL

A0A2N9FYQ0 Uncharacterized protein5.9e-1950Show/hide
Query:  KSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTLG
        K   +KR  +PFT+EQL N+FKSHD DGDG+L+++E+K+AFKYLGS + ++R  +A+  ADA+ DG+I  +E+K+L++Y     YT+G
Subjt:  KSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTLG

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein3.2e-3379.12Show/hide
Query:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL
        MGN+KS  YKR LVPF++EQLANVFK+HDRDGDG LTKEELKQAF+YLGS F +FRV+EALRAAD NGDG ISMDEM +LIKY KTRKYT+
Subjt:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL

A0A5A7VBH2 Calcium-binding EF-hand3.6e-1649.4Show/hide
Query:  YKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL
        YKR  VPF+ +QL ++F  HD DGDG+L++ ELK AF  LGSN+  FR +++L+AADA+GDG++++DE+  L+ Y   R+Y +
Subjt:  YKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTL

A0A7N2KRS3 Uncharacterized protein3.1e-2054.55Show/hide
Query:  KSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTLG
        K+  +KR  VPF ++QL N+FKSHD DGDG+L+++ELK AFKYLGS + ++R  +ALR ADAN DG+I+ DE+K+L++Y     YT+G
Subjt:  KSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTLG

SwissProt top hitse value%identityAlignment
P24044 Calmodulin1.9e-0636.92Show/hide
Query:  TDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI
        T+E+L   F+  DRDGDG ++ +EL+     LG    +  V E +R AD +GDG I+ +E  +++
Subjt:  TDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI

P27166 Calmodulin4.2e-0636.92Show/hide
Query:  TDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI
        T+E+L   FK  DRDG+G ++  EL+     LG       V E +R AD +GDG I+ +E  +++
Subjt:  TDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI

P62203 Calmodulin1.9e-0636.92Show/hide
Query:  TDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI
        T+E+L   F+  DRDGDG ++ +EL+     LG    +  V E +R AD +GDG I+ +E  +++
Subjt:  TDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI

Q0DZP5 Probable calcium-binding protein CML178.5e-0742.62Show/hide
Query:  QLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQL
        +L  VF+  DRDGDG++T+EEL ++ + LG       +   +   DANGDG + MDE  QL
Subjt:  QLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQL

Q8RZB5 Probable calcium-binding protein CML101.4e-0637.88Show/hide
Query:  PFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQL
        P  +E++  VF+  D +GDG++++ EL   F+ LG       +   +  ADA+GDGFIS+DE   L
Subjt:  PFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQL

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family5.1e-0738.24Show/hide
Query:  VPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI
        V    EQL  +FKS DRDG+G ++  EL  A   +G       + E ++ AD NGDG IS  E   ++
Subjt:  VPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI

AT1G73630.1 EF hand calcium-binding protein family5.1e-0729.27Show/hide
Query:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIK
        M N       ++  P TD +L  VF   D +GDG+++  EL   FK +G+++    +   L   D + DGFI+ +E   + +
Subjt:  MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIK

AT3G03000.1 EF hand calcium-binding protein family3.0e-0737.31Show/hide
Query:  PFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI
        P+TD+QL  +F+  DRDG+G +T  EL  +   LG    +  +   ++ AD +GDG I   E  Q I
Subjt:  PFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI

AT3G25600.1 Calcium-binding EF-hand family protein3.0e-0738.24Show/hide
Query:  VPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI
        V    EQL  VF+S DRDG+G +T  EL  +   +G       + E +  AD+NGDG IS +E   ++
Subjt:  VPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLI

AT4G03290.1 EF hand calcium-binding protein family3.9e-0736.51Show/hide
Query:  QLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIK
        +L  VF+  D+DGDG++T +EL ++FK LG       + + ++  D NGDG + ++E  +L K
Subjt:  QLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATGCCAAAAGTACACGTTACAAACGAGCTTTGGTTCCATTCACGGATGAGCAACTCGCCAACGTTTTCAAGAGCCACGACCGTGACGGTGACGGGCAGCTAAC
AAAGGAGGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCCAACTTTTGCTCCTTTAGGGTCAAAGAAGCCCTACGTGCTGCCGATGCGAACGGCGACGGCTTCATCAGCA
TGGACGAGATGAAACAGCTTATTAAGTATACCAAAACACGTAAATACACTCTTGGTTAA
mRNA sequenceShow/hide mRNA sequence
AAGACCCTATCAACCCAAACAAAAAGCTCATTCCCATTCCTCGTTGATCCTCATTGTCTTCTTCTTCTTCTTCGATGGGAAATGCCAAAAGTACACGTTACAAACGAGCT
TTGGTTCCATTCACGGATGAGCAACTCGCCAACGTTTTCAAGAGCCACGACCGTGACGGTGACGGGCAGCTAACAAAGGAGGAGTTGAAGCAAGCCTTCAAATATCTTGG
CTCCAACTTTTGCTCCTTTAGGGTCAAAGAAGCCCTACGTGCTGCCGATGCGAACGGCGACGGCTTCATCAGCATGGACGAGATGAAACAGCTTATTAAGTATACCAAAA
CACGTAAATACACTCTTGGTTAAAGTTGTCAACTATACTTCCTTATTTTTCGATGGGTAGATATTTTAATAAGGAGAGAAAAAGTACTATTTGGAGACATGATAAACAAT
GTTCTCTCTTTAATGGTAACGATTTTATTCTGGAGTATGGAAGATTGTTGTGCTCTCGGGTTCAACCTATGTATTTTTCTTAAAGTTCATCTATGTTGTTTTCTCCAACT
AAGTTATTTCTTGTTTACGGTTCATGTATGTGCTAATATAAGTTTTTTCTTTTTTCTTTTTTTTTGGAAATGAATATATGTTATTTCTTCA
Protein sequenceShow/hide protein sequence
MGNAKSTRYKRALVPFTDEQLANVFKSHDRDGDGQLTKEELKQAFKYLGSNFCSFRVKEALRAADANGDGFISMDEMKQLIKYTKTRKYTLG