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Sed0014684 (gene) of Chayote v1 genome

Gene IDSed0014684
OrganismSechium edule (Chayote v1)
DescriptionAt4g19430
Genome locationLG06:17283274..17284096
RNA-Seq ExpressionSed0014684
SyntenySed0014684
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052276.1 hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa]3.8e-3764.93Show/hide
Query:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC
        MS+STQLL L   +K+ +K +KR++S+RER G+Y Y+EVSD+ + GD KGRRR      RRRK  QF T R VL +N WYFTSTISHILRKAKAFYNECC
Subjt:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC

Query:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC
        CDAYEDE+M       +DPYFSMPVLPYTTMA C
Subjt:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC

KAG6608012.1 hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia]3.7e-4069.12Show/hide
Query:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVS--DSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNE
        MSVS Q+L L   +K+EKK  +R+  ERERTGH+   +    +SEQ GDGKGRRR K K GRRRK  QF  AR+VLQ N+WYFTSTIS+ILRKAKAFYNE
Subjt:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVS--DSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNE

Query:  CCCDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC
        CCCDAYEDE+M++VEVA+VDPYFSMPV PYTTMA C
Subjt:  CCCDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC

KGN55571.1 hypothetical protein Csa_012627 [Cucumis sativus]3.1e-3965.67Show/hide
Query:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC
        MSVSTQLL L   +K+ KK +KR++ +RE  G+Y Y++VSD+E+ G+ KGRRR K     RRK  QF T R VL +N WYFTSTISHILRKAKAFYNECC
Subjt:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC

Query:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC
        CDA+EDE+M+K EV  +DPYFSMPVLPYTTMA C
Subjt:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC

TYK01842.1 hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa]5.0e-3764.93Show/hide
Query:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC
        MS+STQLL L   +K+ +K +KR++S+RER G+Y Y+EVSD+ + GD KGRRR      RRRK  QF T R VL +N WYFTSTISHILRKAKAFYNECC
Subjt:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC

Query:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC
        CDAYEDE+M       +DPYFSMPVLPYTTMA C
Subjt:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC

XP_022940822.1 uncharacterized protein LOC111446301 [Cucurbita moschata]2.8e-4069.12Show/hide
Query:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVS--DSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNE
        MSVS Q+L L+  +K+EKK  +R+  ERERTGH+   +    +SEQ GDGKGRRR K K GRRRK  QF  AR+VLQ N+WYFTSTIS+ILRKAKAFYNE
Subjt:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVS--DSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNE

Query:  CCCDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC
        CCCDAYEDE+M++VEVA+VDPYFSMPV PYTTMA C
Subjt:  CCCDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC

TrEMBL top hitse value%identityAlignment
A0A0A0L609 Uncharacterized protein1.5e-3965.67Show/hide
Query:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC
        MSVSTQLL L   +K+ KK +KR++ +RE  G+Y Y++VSD+E+ G+ KGRRR K     RRK  QF T R VL +N WYFTSTISHILRKAKAFYNECC
Subjt:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC

Query:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC
        CDA+EDE+M+K EV  +DPYFSMPVLPYTTMA C
Subjt:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC

A0A1Q3D8H6 Uncharacterized protein (Fragment)2.1e-1254.93Show/hide
Query:  RKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMRKVEVALVDPYFSMPVLPYTTMA
        RK      A +  +L +WY TS+IS+ILRKAKAFYNECCCDA+ED  +   +V LVD YFS PV+P  T++
Subjt:  RKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMRKVEVALVDPYFSMPVLPYTTMA

A0A5A7UDK1 Uncharacterized protein1.9e-3764.93Show/hide
Query:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC
        MS+STQLL L   +K+ +K +KR++S+RER G+Y Y+EVSD+ + GD KGRRR      RRRK  QF T R VL +N WYFTSTISHILRKAKAFYNECC
Subjt:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC

Query:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC
        CDAYEDE+M       +DPYFSMPVLPYTTMA C
Subjt:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC

A0A5D3BSQ8 Uncharacterized protein2.4e-3764.93Show/hide
Query:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC
        MS+STQLL L   +K+ +K +KR++S+RER G+Y Y+EVSD+ + GD KGRRR      RRRK  QF T R VL +N WYFTSTISHILRKAKAFYNECC
Subjt:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECC

Query:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC
        CDAYEDE+M       +DPYFSMPVLPYTTMA C
Subjt:  CDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC

A0A6J1FKP2 uncharacterized protein LOC1114463011.4e-4069.12Show/hide
Query:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVS--DSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNE
        MSVS Q+L L+  +K+EKK  +R+  ERERTGH+   +    +SEQ GDGKGRRR K K GRRRK  QF  AR+VLQ N+WYFTSTIS+ILRKAKAFYNE
Subjt:  MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVS--DSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNE

Query:  CCCDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC
        CCCDAYEDE+M++VEVA+VDPYFSMPV PYTTMA C
Subjt:  CCCDAYEDEKMRKVEVALVDPYFSMPVLPYTTMATC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19430.1 unknown protein1.5e-1054.39Show/hide
Query:  RKVLQLN-LWYFTSTISHILRKAKAFYNECCCDAYEDEKMRKVEVALVDPYFSMPVL
        R V +L+ LWY   +ISHILRKA+AFYNE CCD Y +       +A+V+PYFS+PV+
Subjt:  RKVLQLN-LWYFTSTISHILRKAKAFYNECCCDAYEDEKMRKVEVALVDPYFSMPVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTTCCACCCAGCTTTTAAGCCTTGAAGGCCCTAAAAAGCAAGAAAAAAAGAGCCTCAAGAGAGATAATTCAGAGAGAGAAAGAACTGGCCATTATGGATACAG
AGAAGTAAGTGACAGTGAGCAGCTTGGAGATGGCAAGGGAAGAAGAAGGGGAAAGATAAAGGGAGGAAGAAGAAGAAAGAATGCTCAGTTTAGGACTGCAAGAAAAGTTC
TTCAATTGAATTTATGGTACTTCACTTCAACAATCAGCCATATCCTAAGGAAGGCCAAAGCGTTTTACAATGAATGTTGCTGTGATGCCTATGAAGATGAGAAGATGAGG
AAAGTTGAAGTTGCTTTGGTTGATCCTTATTTTTCAATGCCTGTTTTACCTTATACTACTATGGCTACTTGTTGTAAATGA
mRNA sequenceShow/hide mRNA sequence
TCACAGCTCTGCTATAAATCATTCAGAAAAAACTTCAGAATCCCAGTAGAATTCATAAAGAAAAGAAAAGAAAAGATCCCTTCTAAGCCTTTTCTGCCCTTCCTCCATTA
ATGTCTGTTTCCACCCAGCTTTTAAGCCTTGAAGGCCCTAAAAAGCAAGAAAAAAAGAGCCTCAAGAGAGATAATTCAGAGAGAGAAAGAACTGGCCATTATGGATACAG
AGAAGTAAGTGACAGTGAGCAGCTTGGAGATGGCAAGGGAAGAAGAAGGGGAAAGATAAAGGGAGGAAGAAGAAGAAAGAATGCTCAGTTTAGGACTGCAAGAAAAGTTC
TTCAATTGAATTTATGGTACTTCACTTCAACAATCAGCCATATCCTAAGGAAGGCCAAAGCGTTTTACAATGAATGTTGCTGTGATGCCTATGAAGATGAGAAGATGAGG
AAAGTTGAAGTTGCTTTGGTTGATCCTTATTTTTCAATGCCTGTTTTACCTTATACTACTATGGCTACTTGTTGTAAATGATATTAAGGCAGAAGAATGAGTGATGGAAC
TAATGTCATGTGTGTCTGTATTGTACCAAGTTATAGGTGGCTAGGATGGGTACTTGTCTACTTAGAAGCTTTTTTGAAAACAAAAGAACCATTTTCCTTTTGTTTTCATT
GTTTGTAAGAGCTATAATTTAGTAGTTAGTAAAAGTTGTGCAAGTTATTGTGCACTAGAAATTGTTGTTTTATAATAGTTTGTGGTTTTGGTAGCCTAGAAGAAGTAGCT
TTTTTCTTTTGATATATGTGACCGCTTACGCGCACCTCATTTATTCTATGACA
Protein sequenceShow/hide protein sequence
MSVSTQLLSLEGPKKQEKKSLKRDNSERERTGHYGYREVSDSEQLGDGKGRRRGKIKGGRRRKNAQFRTARKVLQLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMR
KVEVALVDPYFSMPVLPYTTMATCCK