; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014711 (gene) of Chayote v1 genome

Gene IDSed0014711
OrganismSechium edule (Chayote v1)
DescriptionNAC domain protein
Genome locationLG07:41735079..41735640
RNA-Seq ExpressionSed0014711
SyntenySed0014711
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036871.1 uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa]4.1e-1962.5Show/hide
Query:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        MPTI +S   P R PS+    A R+R    TCRS SF G+VR  RN  A  GD+ RR QG+REVLRRAL PPSRRPTLRW+ FRPTPSRLS M+MA
Subjt:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

KAG6607862.1 hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia]8.9e-2267.01Show/hide
Query:  MPTILESHRQPSRRPSLPAAA--ASRSRT----CRSFSFSGVVRSCRNFTAAGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        MPTI +S +QP+ RPS   A     RSR+    CRS SF GV R  RN TAAGDKLRRLQG RE+LRRAL PP+RRPTLRWL FR TPSRLSNM+MA
Subjt:  MPTILESHRQPSRRPSLPAAA--ASRSRT----CRSFSFSGVVRSCRNFTAAGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

KAG7024857.1 hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-2473.2Show/hide
Query:  MPTILESHRQPSRRPSLPAAAA---SRS--RTCRSFSFSGVVRSCRN-FTAAGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        MPTI +S  QP RRPSL AAA    SRS   TCRSFSFSG+VRS RN  TA GDK RR QG REVLRRAL PP+R+PTLRWL FRPTPSRLSNM+MA
Subjt:  MPTILESHRQPSRRPSLPAAAA---SRS--RTCRSFSFSGVVRSCRN-FTAAGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

KGN60027.2 hypothetical protein Csa_001878 [Cucumis sativus]4.1e-1962.5Show/hide
Query:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        MPTI +S   P R PS+      R+R    TCRSFSF G+VR  RN  A  GD+ RR QG+REVLRRAL PPSRRPTLRW+ FRPTPSRLS M+MA
Subjt:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

XP_011652880.1 uncharacterized protein LOC105435142 [Cucumis sativus]4.1e-1962.5Show/hide
Query:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        MPTI +S   P R PS+      R+R    TCRSFSF G+VR  RN  A  GD+ RR QG+REVLRRAL PPSRRPTLRW+ FRPTPSRLS M+MA
Subjt:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

TrEMBL top hitse value%identityAlignment
A0A0A0LD23 Uncharacterized protein2.0e-1962.5Show/hide
Query:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        MPTI +S   P R PS+      R+R    TCRSFSF G+VR  RN  A  GD+ RR QG+REVLRRAL PPSRRPTLRW+ FRPTPSRLS M+MA
Subjt:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

A0A4U5P590 Uncharacterized protein4.2e-0954.32Show/hide
Query:  RRPSLPAAAASRSR-TCRSFSFSGVVR-SCRNFTAAGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        RR +  A+ + R R TC   +  G VR S   +    DKLRR Q   E+LRRALAPP+RR TLRW  F+PTPSRLSNM+MA
Subjt:  RRPSLPAAAASRSR-TCRSFSFSGVVR-SCRNFTAAGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

A0A4U5R551 Uncharacterized protein4.2e-0961.19Show/hide
Query:  TCRSFSFSGVVR-SCRNFTAAGDKL-RRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        TC   +  G VR S   +   GDKL RR Q  +E+LRRALAPP+RR TLRW  FRPTPSRLSNM+MA
Subjt:  TCRSFSFSGVVR-SCRNFTAAGDKL-RRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

A0A5A7T5L7 Uncharacterized protein2.0e-1962.5Show/hide
Query:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        MPTI +S   P R PS+    A R+R    TCRS SF G+VR  RN  A  GD+ RR QG+REVLRRAL PPSRRPTLRW+ FRPTPSRLS M+MA
Subjt:  MPTILESHRQPSRRPSLPAAAASRSR----TCRSFSFSGVVRSCRNFTA-AGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

A0A6M2EHA0 Uncharacterized protein4.2e-0961.19Show/hide
Query:  TCRSFSFSGVVR-SCRNFTAAGDKL-RRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA
        TC   +  G VR S   +   GDKL RR Q  +E+LRRALAPP+RR TLRW  FRPTPSRLSNM+MA
Subjt:  TCRSFSFSGVVR-SCRNFTAAGDKL-RRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15518.1 unknown protein7.8e-0874.29Show/hide
Query:  GTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMT
        G+REVLRRAL PP RR  LRWL FRPTPSRL  M+
Subjt:  GTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACAATTCTTGAATCTCATCGGCAACCTTCTCGCCGGCCGTCGCTCCCCGCCGCCGCCGCCAGCCGGAGCCGCACTTGCAGAAGCTTCAGTTTCAGCGGGGTGGT
TAGAAGTTGCCGGAATTTCACGGCGGCCGGAGATAAGCTGCGGCGGCTTCAGGGTACCAGGGAGGTGTTGCGACGGGCGTTGGCGCCGCCCAGCCGGAGACCCACTCTCC
GGTGGTTGAAATTCCGGCCGACTCCTAGCCGCCTGTCGAATATGACCATGGCTTGA
mRNA sequenceShow/hide mRNA sequence
TAAAAAACATTCAAACCCACAATTTCCATCTGGGTTTTAATCCTTCTCTCAAAAAATGCCTACAATTCTTGAATCTCATCGGCAACCTTCTCGCCGGCCGTCGCTCCCCG
CCGCCGCCGCCAGCCGGAGCCGCACTTGCAGAAGCTTCAGTTTCAGCGGGGTGGTTAGAAGTTGCCGGAATTTCACGGCGGCCGGAGATAAGCTGCGGCGGCTTCAGGGT
ACCAGGGAGGTGTTGCGACGGGCGTTGGCGCCGCCCAGCCGGAGACCCACTCTCCGGTGGTTGAAATTCCGGCCGACTCCTAGCCGCCTGTCGAATATGACCATGGCTTG
ATCGGATTTTTTTTTTTTTTGGGATTATTCTTTGATTCGATTCTGTCATTTTGTTTCTTTAATTTTTAGGGTTTTCTGTTATGATTTGTGGATGATTCAATGAAGAGATT
GATTTACTTCCTAATTTTGTGTATAATTTTTCCATTTCTTTTCTAGTTTCCATGGTACTTATTGAAGATCTAACTGTTTGTGACATATATATATATATATATATTCTATT
AGTACGTTTGTG
Protein sequenceShow/hide protein sequence
MPTILESHRQPSRRPSLPAAAASRSRTCRSFSFSGVVRSCRNFTAAGDKLRRLQGTREVLRRALAPPSRRPTLRWLKFRPTPSRLSNMTMA