; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014715 (gene) of Chayote v1 genome

Gene IDSed0014715
OrganismSechium edule (Chayote v1)
DescriptionRNA-binding protein pno1
Genome locationLG03:8547835..8549494
RNA-Seq ExpressionSed0014715
SyntenySed0014715
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577533.1 Gamma-tubulin complex component 2, partial [Cucurbita argyrosperma subsp. sororia]7.3e-11392.24Show/hide
Query:  METLNNSTMQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKT
        +ET +NS MQST++STSMEV+TVS ++K V STLPPKP FDPLKPHEMNDGR+QFRKVSVP HRY+PLKKAWMEIYTP+YEQMKIDIRMNLK RKVELKT
Subjt:  METLNNSTMQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKT

Query:  RADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKI
        RADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKI
Subjt:  RADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKI

Query:  ARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        ARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Subjt:  ARDSLCSLILGSPAGKVYSKLRAVTARLAERF

XP_008449001.1 PREDICTED: RNA-binding protein pno1 [Cucumis melo]3.6e-11294.64Show/hide
Query:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQST+ASTSMEV+T+S Q+K V STLPPKP FDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTP+Y+QMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022951370.1 RNA-binding protein pno1-like isoform X1 [Cucurbita moschata]5.6e-11395.54Show/hide
Query:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQST+ASTSMEV+ VS+Q K V STLPPKPHFDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDA+ALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_023005535.1 RNA-binding protein pno1-like isoform X1 [Cucurbita maxima]5.6e-11395.98Show/hide
Query:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQST+ASTSMEV+ VS Q K V STLPPKPHFDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_023540523.1 RNA-binding protein pno1-like isoform X1 [Cucurbita pepo subsp. pepo]9.6e-11395.54Show/hide
Query:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQST+ASTSMEV+ VS Q K V STLPPKPHFDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTP+YEQMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A1S3BLP2 RNA-binding protein pno11.8e-11294.64Show/hide
Query:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQST+ASTSMEV+T+S Q+K V STLPPKP FDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTP+Y+QMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1EWL7 RNA-binding protein pno13.0e-11294.64Show/hide
Query:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQST+ASTSMEV+TVS ++K V STLPPKP FDPLKPHEMNDGR+QFRKVSVP HRY+PLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1GHF0 RNA-binding protein pno1-like isoform X12.7e-11395.54Show/hide
Query:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQST+ASTSMEV+ VS+Q K V STLPPKPHFDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDA+ALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1HQ98 RNA-binding protein pno1-like3.3e-11193.75Show/hide
Query:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQ T+ASTSMEV+TVS ++K V STLPPKP FDPLKPHEMNDGR+QFRKVSVP HRY+PLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAF+LGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1KXN9 RNA-binding protein pno1-like isoform X12.7e-11395.98Show/hide
Query:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQST+ASTSMEV+ VS Q K V STLPPKPHFDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno14.1e-6658.41Show/hide
Query:  EVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH
        E+DTV +++         +P F P+K  ++  G+ + RK+ VPSHRY+PLK+ WM+I+TPV E +K+ IR NL +R VE++   +T DI  +QK ADFV 
Subjt:  EVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH

Query:  AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVY
        AF+LGF+V DA+AL+R+D+L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY
Subjt:  AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVY

Query:  SKLRAVTARLAERF
          +RAV +R AERF
Subjt:  SKLRAVTARLAERF

Q5F414 RNA-binding protein PNO11.7e-6458.57Show/hide
Query:  SAQSKAVASTLPPK-PHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFML
        +A+S   A   P K P F PL    +  G+ + RKV VP++RY+PLK+ WM+I+TP+ E +++ IR NLK R VE+KT ++T D+S L K ADFV AF+L
Subjt:  SAQSKAVASTLPPK-PHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFML

Query:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR
        GF V DA+AL+R+D+L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  KVY  +R
Subjt:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR

Query:  AVTARLAERF
        AV +R AERF
Subjt:  AVTARLAERF

Q6VBQ6 RNA-binding protein PNO15.9e-6560.2Show/hide
Query:  KPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD
        +PHF P+   ++  G  + RKV+VP+HRY+PLK+ W++I+TP+ E +++ +R NLK R VE+KT  +T DI+ L K ADF+ AF+LGF V DA+AL+R+D
Subjt:  KPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        EL++ESF++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q6VEU3 RNA-binding protein PNO11.6e-6557.94Show/hide
Query:  EVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH
        E+DT + +S + A     +PHF  L   ++  G  + RKV VPSHRY+PLK+ W++I+TP+ E +++ +R NLK R+VE+KT  +T DI  L + ADFV 
Subjt:  EVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH

Query:  AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVY
        AF+LGF V DA+AL+R+DEL++E+F++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY
Subjt:  AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVY

Query:  SKLRAVTARLAERF
          LRAV  R AERF
Subjt:  SKLRAVTARLAERF

Q9VR89 RNA-binding protein pno11.6e-6565.78Show/hide
Query:  PHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE
        P +    R + RKVSVP HRYS LK+ WM+I+TPV E MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein4.8e-9479.63Show/hide
Query:  STSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCA
        ST MEV+T +  +      LPPKP F PLK HEM+DG+VQFRK++VP +RYSPLKKAW++IYTP+Y+QMK+DIRMNLKARKVELKTRADTPDISNLQK A
Subjt:  STSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCA

Query:  DFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA
        DFVHAFMLGFD+ DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPA
Subjt:  DFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA

Query:  GKVYSKLRAVTARLAE
        GKVYSKLR+V+ARL E
Subjt:  GKVYSKLRAVTARLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTCTGAACAATTCCACAATGCAGTCAACCCAAGCATCCACTTCCATGGAAGTGGATACAGTGTCAGCTCAATCGAAAGCCGTAGCTAGCACATTGCCACCAAA
ACCACACTTTGATCCTCTAAAGCCCCATGAGATGAATGATGGTCGAGTTCAATTCCGAAAGGTCTCTGTTCCTTCACATCGATATTCTCCGCTCAAGAAAGCATGGATGG
AGATTTACACCCCAGTTTATGAGCAGATGAAAATCGACATCCGAATGAATCTCAAGGCACGTAAAGTTGAACTGAAAACCAGAGCAGACACACCTGACATCAGTAACTTG
CAGAAGTGTGCAGATTTTGTTCATGCCTTCATGCTTGGTTTCGATGTGATCGATGCCATTGCACTCTTACGGGTGGATGAGCTCTATGTGGAGTCTTTTGAGATTAAAGA
TGTTAAAACGCTGCGAGGCGAGCACTTGTCCCGTGCCATTGGAAGATTGTCTGGCAAGGCTGGTAAGACGAAGTTTGCCATCGAAAATGCGACGAAGACCAGGATAGTTA
TTGCAGACACCAAAATTCACATATTAGGATCCTTTGCGAATATCAAAATTGCAAGGGATTCTCTTTGCAGCCTCATTTTAGGGTCCCCTGCTGGAAAAGTATATTCAAAA
CTAAGAGCAGTTACAGCCAGATTGGCTGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAACAAAACATTGGGACGAAAAAGGAAATCGTTAAACCCTAATTCCTATCCTACCTTCATCTTCAAGCACCTACCTGCCGCCGCCGCCGCCGCCGCCACCGCACTCCT
CTTCACAGATTTTGTACTCTTTCTTGATATCAGGATCTCAGTATGGAAACTCTGAACAATTCCACAATGCAGTCAACCCAAGCATCCACTTCCATGGAAGTGGATACAGT
GTCAGCTCAATCGAAAGCCGTAGCTAGCACATTGCCACCAAAACCACACTTTGATCCTCTAAAGCCCCATGAGATGAATGATGGTCGAGTTCAATTCCGAAAGGTCTCTG
TTCCTTCACATCGATATTCTCCGCTCAAGAAAGCATGGATGGAGATTTACACCCCAGTTTATGAGCAGATGAAAATCGACATCCGAATGAATCTCAAGGCACGTAAAGTT
GAACTGAAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAGAAGTGTGCAGATTTTGTTCATGCCTTCATGCTTGGTTTCGATGTGATCGATGCCATTGCACTCTT
ACGGGTGGATGAGCTCTATGTGGAGTCTTTTGAGATTAAAGATGTTAAAACGCTGCGAGGCGAGCACTTGTCCCGTGCCATTGGAAGATTGTCTGGCAAGGCTGGTAAGA
CGAAGTTTGCCATCGAAAATGCGACGAAGACCAGGATAGTTATTGCAGACACCAAAATTCACATATTAGGATCCTTTGCGAATATCAAAATTGCAAGGGATTCTCTTTGC
AGCCTCATTTTAGGGTCCCCTGCTGGAAAAGTATATTCAAAACTAAGAGCAGTTACAGCCAGATTGGCTGAAAGGTTTTGATCTTTCATGATTATTGTACTTTTTGTGAG
TTTCTATTGATTAATGATTTTTGCACACTAGTTATTTGAGGGATAGTGTCTAACTATGTTGAGAAGATGTGCATTGAGGCTTTGTTTGAGATTCTGATTATAAATCAATC
TTCATATAATAGGTTTCAGATTATTGGCATTTGCTGGTTTCATTTTTGCCTGTCGATCGAGGTTCATATGTAATAGCTTTGTCCTTTTATTGAATTAACATTGATATCCA
TTTGGATCTTTGTGTTTAAAGTGTTGCTTCACTTTTTTTTTTCTTCAAAAAAGGGTTTGCTTCATTTTGTGAGAGCCCTTAAGAATAGGGTTTATTTTTCTTATTTTTGT
TTAGAAAACCCTTTGGTTTGT
Protein sequenceShow/hide protein sequence
METLNNSTMQSTQASTSMEVDTVSAQSKAVASTLPPKPHFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNL
QKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSK
LRAVTARLAERF