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Sed0014757 (gene) of Chayote v1 genome

Gene IDSed0014757
OrganismSechium edule (Chayote v1)
Descriptionmini zinc finger
Genome locationLG08:1231414..1232069
RNA-Seq ExpressionSed0014757
SyntenySed0014757
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135253.1 mini zinc finger protein 3-like [Momordica charantia]4.6e-3787.23Show/hide
Query:  MKKRLVVVKAKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN
        MKKRLVVV  KKS+GSG RNR GSGSVVRYAECQKNHAAK+GGFAVDGCREFMA GEDGTEEAL CAAC CHR+FHRREVDSEVVFEYSP NS+
Subjt:  MKKRLVVVKAKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN

XP_022921765.1 mini zinc finger protein 3-like [Cucurbita moschata]8.6e-3683.33Show/hide
Query:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN
        MKKR+VVV  KKS+GSG R NR GSGSVVRYAECQKNHAAK+GGFAVDGCREFMA GE+GTEEAL+CAACGCHR+FHRREVD+EVVFEYSP NS++
Subjt:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN

XP_022987207.1 mini zinc finger protein 3-like [Cucurbita maxima]1.9e-3582.29Show/hide
Query:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN
        MKKR+VVV  KKS+GSG R NR GSGSVVRYAECQKNHAAK+GGFAVDGCREFMA GE+GTEEAL+CAACGCHR+FHRR+VD+EVVFEYSP NS++
Subjt:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN

XP_023516615.1 mini zinc finger protein 3-like [Cucurbita pepo subsp. pepo]5.1e-3683.33Show/hide
Query:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN
        MKKR+VVV  KKS+GSG R NR GSGSVVRYAECQKNHAAK+GGFAVDGCREFMA GE+GTEEAL+CAACGCHR+FHRREVD+EVVFEYSP+NS++
Subjt:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN

XP_038880256.1 mini zinc finger protein 3 [Benincasa hispida]5.1e-3684.54Show/hide
Query:  MKKRLVVVKAKKSNGSGDR---NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN
        MKKRLVVV  KKS+GS  R   NR  SGSVVRYAECQKNHAAK+GGFAVDGCREFMA GEDGTEEALNCAACGCHR+FHRREVD+EVVFEYSP NSN
Subjt:  MKKRLVVVKAKKSNGSGDR---NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN

TrEMBL top hitse value%identityAlignment
A0A1S3BWG1 mini zinc finger protein 3-like1.0e-3482.65Show/hide
Query:  MKKRLVVVKAKKSNGS-GDRNRY---GSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN
        MKKRLVVV  KKS+GS G RN +    SGS VRYAECQKNHAAK+GGFAVDGCREFMA GEDGTEEALNCAACGCHR+FHRREVD+EVVFEYSP NSN
Subjt:  MKKRLVVVKAKKSNGS-GDRNRY---GSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN

A0A5A7UWS7 Mini zinc finger protein 3-like1.0e-3482.65Show/hide
Query:  MKKRLVVVKAKKSNGS-GDRNRY---GSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN
        MKKRLVVV  KKS+GS G RN +    SGS VRYAECQKNHAAK+GGFAVDGCREFMA GEDGTEEALNCAACGCHR+FHRREVD+EVVFEYSP NSN
Subjt:  MKKRLVVVKAKKSNGS-GDRNRY---GSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN

A0A6J1C4B2 mini zinc finger protein 3-like2.2e-3787.23Show/hide
Query:  MKKRLVVVKAKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN
        MKKRLVVV  KKS+GSG RNR GSGSVVRYAECQKNHAAK+GGFAVDGCREFMA GEDGTEEAL CAAC CHR+FHRREVDSEVVFEYSP NS+
Subjt:  MKKRLVVVKAKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSN

A0A6J1E6Q9 mini zinc finger protein 3-like4.2e-3683.33Show/hide
Query:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN
        MKKR+VVV  KKS+GSG R NR GSGSVVRYAECQKNHAAK+GGFAVDGCREFMA GE+GTEEAL+CAACGCHR+FHRREVD+EVVFEYSP NS++
Subjt:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN

A0A6J1J9R5 mini zinc finger protein 3-like9.3e-3682.29Show/hide
Query:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN
        MKKR+VVV  KKS+GSG R NR GSGSVVRYAECQKNHAAK+GGFAVDGCREFMA GE+GTEEAL+CAACGCHR+FHRR+VD+EVVFEYSP NS++
Subjt:  MKKRLVVVKAKKSNGSGDR-NRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 18.1e-2174.19Show/hide
Query:  RYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDS
        R  +  VVRY ECQ+NHAA IGG AVDGCREFMASG +GT  AL CAACGCHRSFHRREV++
Subjt:  RYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDS

Q2Q493 Mini zinc finger protein 32.4e-2868.42Show/hide
Query:  MKKRLVVVKAKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN
        MKKR VV+K +KS+         S S VRY ECQKNHAA IGG+AVDGCREFMASG D   +AL CAACGCHR+FHRREVD+EVV EYSP N+NN
Subjt:  MKKRLVVVKAKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN

Q2RB28 Mini zinc finger protein 18.1e-2174.19Show/hide
Query:  RYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDS
        R  +  VVRY ECQ+NHAA IGG AVDGCREFMASG +GT  AL CAACGCHRSFHRREV++
Subjt:  RYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDS

Q9CA51 Mini zinc finger protein 15.8e-2761.39Show/hide
Query:  MKKRLVVVK--AKKSNGSGDRNRYGSGSV------VRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSN
        MKKR +V+K  ++ SN S       S S       VRY ECQKNHAA IGG+AVDGCREFMA+G +GT +AL CAACGCHR+FHR+EVD+EVV EYSP N
Subjt:  MKKRLVVVK--AKKSNGSGDRNRYGSGSV------VRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSN

Query:  S
        +
Subjt:  S

Q9LJW5 Mini zinc finger protein 23.3e-2259Show/hide
Query:  MKKRLVVV-KAKKSNGSGDRNRYGSGSV--VRYAECQKNHAAKIGGFAVDGCREFMAS-GEDGTEEALNCAACGCHRSFHRREVDSEVVFE-YSPSNSNN
        M+KR VV+ +A     S   +   S +V  VRY ECQKNHAA +GG+AVDGCREFMAS GE+GT  AL CAACGCHRSFHRRE+++EVV +  SP ++ N
Subjt:  MKKRLVVV-KAKKSNGSGDRNRYGSGSV--VRYAECQKNHAAKIGGFAVDGCREFMAS-GEDGTEEALNCAACGCHRSFHRREVDSEVVFE-YSPSNSNN

Arabidopsis top hitse value%identityAlignment
AT1G18835.1 mini zinc finger1.7e-2968.42Show/hide
Query:  MKKRLVVVKAKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN
        MKKR VV+K +KS+         S S VRY ECQKNHAA IGG+AVDGCREFMASG D   +AL CAACGCHR+FHRREVD+EVV EYSP N+NN
Subjt:  MKKRLVVVKAKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN

AT1G74660.1 mini zinc finger 14.1e-2861.39Show/hide
Query:  MKKRLVVVK--AKKSNGSGDRNRYGSGSV------VRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSN
        MKKR +V+K  ++ SN S       S S       VRY ECQKNHAA IGG+AVDGCREFMA+G +GT +AL CAACGCHR+FHR+EVD+EVV EYSP N
Subjt:  MKKRLVVVK--AKKSNGSGDRNRYGSGSV------VRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSN

Query:  S
        +
Subjt:  S

AT2G18350.1 homeobox protein 242.1e-1965.57Show/hide
Query:  RYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYS
        RY ECQKNHAA  GG  VDGC EFM+SGE+GT E+L CAAC CHRSFHR+E+D   V  ++
Subjt:  RYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYS

AT3G28917.1 mini zinc finger 22.3e-2359Show/hide
Query:  MKKRLVVV-KAKKSNGSGDRNRYGSGSV--VRYAECQKNHAAKIGGFAVDGCREFMAS-GEDGTEEALNCAACGCHRSFHRREVDSEVVFE-YSPSNSNN
        M+KR VV+ +A     S   +   S +V  VRY ECQKNHAA +GG+AVDGCREFMAS GE+GT  AL CAACGCHRSFHRRE+++EVV +  SP ++ N
Subjt:  MKKRLVVV-KAKKSNGSGDRNRYGSGSV--VRYAECQKNHAAKIGGFAVDGCREFMAS-GEDGTEEALNCAACGCHRSFHRREVDSEVVFE-YSPSNSNN

AT4G24660.1 homeobox protein 222.2e-2163.01Show/hide
Query:  AKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDS
        A  S G G     G G+ +RY EC KNHA  IGG AVDGC EFM SGEDGT +AL CAACGCHR+FHR+E +S
Subjt:  AKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGGTTGGTGGTGGTGAAGGCCAAGAAATCCAATGGCTCTGGTGACCGAAACCGCTACGGTTCGGGCTCGGTCGTCCGCTACGCCGAGTGCCAGAAGAACCA
CGCTGCGAAGATCGGCGGGTTTGCAGTGGATGGCTGCCGGGAGTTCATGGCGAGCGGAGAGGACGGGACTGAGGAGGCTCTGAACTGTGCTGCTTGTGGCTGCCATAGGA
GTTTTCATAGAAGGGAGGTTGATTCTGAAGTTGTTTTTGAGTATTCTCCTTCAAATTCCAATAATTGA
mRNA sequenceShow/hide mRNA sequence
TATAAATATCTCTCTTAGGGTTAGGGTTATATTAGGCAGTTCCTTCAAGCACATCAAGATTTATTCAACCCCCAAAAAGAAGAAGCCAAAAAAAAAAAAAAAAAAATCCT
TTCCTTTTAGTTTGATCCATACCAAAAAGAAACCCCAAATTCAGCTAAATTGGTGGGTTTAGAGCTTCGAGTGATTCCAAAACCATGAAGAAAAGGTTGGTGGTGGTGAA
GGCCAAGAAATCCAATGGCTCTGGTGACCGAAACCGCTACGGTTCGGGCTCGGTCGTCCGCTACGCCGAGTGCCAGAAGAACCACGCTGCGAAGATCGGCGGGTTTGCAG
TGGATGGCTGCCGGGAGTTCATGGCGAGCGGAGAGGACGGGACTGAGGAGGCTCTGAACTGTGCTGCTTGTGGCTGCCATAGGAGTTTTCATAGAAGGGAGGTTGATTCT
GAAGTTGTTTTTGAGTATTCTCCTTCAAATTCCAATAATTGAAGAGATTTATCATCATCATCATCATCCAAAATTGACAAAAAAGGGTTTGTTATTATATGTAAGATTTT
TATATGGTCTAGGTTTGATTTTTTACTTTTGATTTTCATGTAAATCTGATCATAACAAATTTCAGTTGTTCTTGTTCTTGTTTTTCTTCAATAATATTGATCAAGG
Protein sequenceShow/hide protein sequence
MKKRLVVVKAKKSNGSGDRNRYGSGSVVRYAECQKNHAAKIGGFAVDGCREFMASGEDGTEEALNCAACGCHRSFHRREVDSEVVFEYSPSNSNN