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Sed0014762 (gene) of Chayote v1 genome

Gene IDSed0014762
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG06:38217282..38219637
RNA-Seq ExpressionSed0014762
SyntenySed0014762
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607017.1 hypothetical protein SDJN03_00359, partial [Cucurbita argyrosperma subsp. sororia]6.0e-5465.48Show/hide
Query:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPRQDYVASHQQH
        MAST   IRLFLLFLLT+SL   S ARPCKSLFVSFS+ RH TLDSR+PFS+MA+IVDITE KS A+   +              LDLPR     + Q H
Subjt:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPRQDYVASHQQH

Query:  P----DLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV
              LG SYDFSSLRDRT DILSVVVALLFGVGCGALTAATMYLA+SLCS++F HRSSVYDD  +E    DDNKENI  MGYVKIP+  AP KSV
Subjt:  P----DLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV

XP_022143446.1 uncharacterized protein LOC111013320 [Momordica charantia]5.1e-5368.62Show/hide
Query:  IRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK-SFAADDETQFPS------PLDLPRQDYVASHQQHP----DLGF
        I L LLFLL I LS S+ ARPCKSLFVSFSL RHRTLDSR+PFS+MA+IVDITE K S A+  E  F S        DL R   VA+ Q HP     LGF
Subjt:  IRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK-SFAADDETQFPS------PLDLPRQDYVASHQQHP----DLGF

Query:  SYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE---DDNKENIDNMGYVKIPDGAAPAKSV
        SYDFSSLRDRT DILSVVVALLFGVGCGALTAATMYLA+SLC++RFG+RSSVY DF DE+   DDNKENI  MGY+K+PD  AP K V
Subjt:  SYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE---DDNKENIDNMGYVKIPDGAAPAKSV

XP_022998635.1 uncharacterized protein LOC111493222 [Cucurbita maxima]1.6e-5465.99Show/hide
Query:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPRQDYVASHQQH
        MASTP  IRLFLLFLLT+SL   S ARPCKSLFVSFS+ RH TLDSR+PFS+MA+IVDITE KS AA   +              LDLPR     + Q H
Subjt:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPRQDYVASHQQH

Query:  P----DLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV
              LG SYDFSSLRDRT DILSVVVALLFGVGCGAL AATMYLA+SLCS++F HRSSVYDD  +E    DDNKENI  MGYVKIP+  AP KSV
Subjt:  P----DLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV

XP_023525953.1 uncharacterized protein LOC111789416 [Cucurbita pepo subsp. pepo]1.0e-5366.5Show/hide
Query:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPR-QDYVASHQ-
        MAST   IRLFLLFLLT+SL   S ARPCKSLFVSFS+ RH TLDSR+PFS+MA+IVDITE KS A+   +              LDLPR + +VAS   
Subjt:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPR-QDYVASHQ-

Query:  --QHPDLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV
          Q   LG SYDFSSLRDRT DILSVVVALLFGVGCGALTAATMYLA+SLCS++F HRSSVYDD  +E    DDNKENI  MGYVKIP+  AP KSV
Subjt:  --QHPDLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV

XP_038904410.1 uncharacterized protein LOC120090765 isoform X2 [Benincasa hispida]3.9e-5366.49Show/hide
Query:  RLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK--SFAADDETQFPS--------PLDLPR-QDYVASHQQHPDLGFS
        RLFLLFL TISLS  SHARPCKSLF+SFSLLRH +LDSR+PFS MA+IVDITEFK  SF++  +  FPS          DLPR +   A+ Q H      
Subjt:  RLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK--SFAADDETQFPS--------PLDLPR-QDYVASHQQHPDLGFS

Query:  YDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE---DDNKENIDNMGYVKIPDGAAPAKSVG
        YDF+SLRDRT DILSVVVALLFGVGCGALTAATMYLA+SL + +FG+RSSVYDD  +E+   DDNKENI  MGY+KIPD  AP KSVG
Subjt:  YDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE---DDNKENIDNMGYVKIPDGAAPAKSVG

TrEMBL top hitse value%identityAlignment
A0A0A0L741 Uncharacterized protein4.2e-5366.31Show/hide
Query:  LFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK--SFAADDETQFPS--------PLDLPRQDYVASHQQHPDLGFSYD
        LFLLFL TIS S  S ARPCKSLF+SFSL RHRTLDS +PFS MA+IVDITEFK  SF++  +  FPS          DLPR   V++  QH    F YD
Subjt:  LFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK--SFAADDETQFPS--------PLDLPRQDYVASHQQHPDLGFSYD

Query:  FSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE----DDNKENIDNMGYVKIPDGAAPAKSVG
        F+SLRDRT DILSVVVALLFGVGCGALTAATMYLA+SL + +FGHRSSVYDDF ++E    DDNKENI  MGY+ IPD  AP KSVG
Subjt:  FSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE----DDNKENIDNMGYVKIPDGAAPAKSVG

A0A1S3C4K4 uncharacterized protein LOC103496817 isoform X39.4e-5365.78Show/hide
Query:  LFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK--SFAADDETQFPS--------PLDLPRQDYVASHQQHPDLGFSYD
        LFLLFL TIS S  S ARPCKSLF+SFSL RHRTLDS +PFS MA+IVDITEFK  SF++  +  FPS          DLPR   V++  QH    F YD
Subjt:  LFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK--SFAADDETQFPS--------PLDLPRQDYVASHQQHPDLGFSYD

Query:  FSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE----DDNKENIDNMGYVKIPDGAAPAKSVG
        F+SLRDRT DILSVVVALLFGVGCGALTAATMYLA+SL + +FGHRSSVYDDF +++    DDNKENI  MGY+ IPD  AP KSVG
Subjt:  FSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE----DDNKENIDNMGYVKIPDGAAPAKSVG

A0A6J1CQ98 uncharacterized protein LOC1110133202.5e-5368.62Show/hide
Query:  IRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK-SFAADDETQFPS------PLDLPRQDYVASHQQHP----DLGF
        I L LLFLL I LS S+ ARPCKSLFVSFSL RHRTLDSR+PFS+MA+IVDITE K S A+  E  F S        DL R   VA+ Q HP     LGF
Subjt:  IRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFK-SFAADDETQFPS------PLDLPRQDYVASHQQHP----DLGF

Query:  SYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE---DDNKENIDNMGYVKIPDGAAPAKSV
        SYDFSSLRDRT DILSVVVALLFGVGCGALTAATMYLA+SLC++RFG+RSSVY DF DE+   DDNKENI  MGY+K+PD  AP K V
Subjt:  SYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEE---DDNKENIDNMGYVKIPDGAAPAKSV

A0A6J1GC62 uncharacterized protein LOC1114528242.5e-5364.97Show/hide
Query:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPRQDYVASHQQH
        MAST   IRLFLLFLLT+SL   S ARPCKSLFVSFS+ RH TLDSR+PFS+MA+IVDITE KS A+   +              LDLPR     + Q H
Subjt:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPRQDYVASHQQH

Query:  P----DLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV
              LG SYDFSSLRDRT DILSVVVALLFGVGCGALTAATMYLA+SLCS++F HRSSVYDD  +E    DDNKENI  MGYVKIP+  A  KSV
Subjt:  P----DLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV

A0A6J1KD14 uncharacterized protein LOC1114932227.7e-5565.99Show/hide
Query:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPRQDYVASHQQH
        MASTP  IRLFLLFLLT+SL   S ARPCKSLFVSFS+ RH TLDSR+PFS+MA+IVDITE KS AA   +              LDLPR     + Q H
Subjt:  MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFP---------SPLDLPRQDYVASHQQH

Query:  P----DLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV
              LG SYDFSSLRDRT DILSVVVALLFGVGCGAL AATMYLA+SLCS++F HRSSVYDD  +E    DDNKENI  MGYVKIP+  AP KSV
Subjt:  P----DLGFSYDFSSLRDRTMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDE---EDDNKENIDNMGYVKIPDGAAPAKSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65720.1 unknown protein2.0e-1537.78Show/hide
Query:  IRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFPSPLDLPRQ-DYVASHQQHPDLGFSYDFSSLRDR
        +R  +  +  +S++T + ARPCK+  +S S     T ++ N  SD      +T F     +     P  ++   +   + S +  P +  S + +S RDR
Subjt:  IRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFPSPLDLPRQ-DYVASHQQHPDLGFSYDFSSLRDR

Query:  TMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEEDD------NKENIDNMGYVKIPDGA-APAK
        T DILSVVVALLFGVGCGALTAATMYL ++L   R  +      DF +EEDD      +  ++  +GYVKIP  A AP K
Subjt:  TMDILSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEEDD------NKENIDNMGYVKIPDGA-APAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCACACCACCTCCGATTCGTCTCTTTCTCCTCTTTCTCCTCACAATTTCCCTCTCAACCTCCTCCCATGCCCGCCCCTGCAAATCCCTCTTCGTTTCCTTCTC
CCTCCTCCGCCACCGAACCCTAGATTCCCGCAACCCCTTCTCCGACATGGCCGTCATCGTCGACATCACCGAGTTCAAATCCTTCGCCGCCGACGACGAAACCCAATTCC
CCTCTCCCTTGGATCTTCCTCGCCAGGACTACGTCGCCTCCCACCAACAACACCCGGACTTGGGCTTCTCTTATGACTTCAGCTCCCTCCGCGATCGCACCATGGATATC
CTCAGCGTCGTCGTCGCCTTGCTCTTCGGCGTCGGCTGCGGCGCTCTCACTGCCGCCACCATGTATTTGGCCTTCTCCTTGTGCTCCGCCCGCTTCGGGCACCGCTCTTC
TGTCTACGACGACTTTTCCGACGAGGAGGATGATAACAAGGAGAATATTGACAACATGGGTTACGTCAAGATCCCCGACGGCGCTGCTCCGGCTAAATCGGTGGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCACACCACCTCCGATTCGTCTCTTTCTCCTCTTTCTCCTCACAATTTCCCTCTCAACCTCCTCCCATGCCCGCCCCTGCAAATCCCTCTTCGTTTCCTTCTC
CCTCCTCCGCCACCGAACCCTAGATTCCCGCAACCCCTTCTCCGACATGGCCGTCATCGTCGACATCACCGAGTTCAAATCCTTCGCCGCCGACGACGAAACCCAATTCC
CCTCTCCCTTGGATCTTCCTCGCCAGGACTACGTCGCCTCCCACCAACAACACCCGGACTTGGGCTTCTCTTATGACTTCAGCTCCCTCCGCGATCGCACCATGGATATC
CTCAGCGTCGTCGTCGCCTTGCTCTTCGGCGTCGGCTGCGGCGCTCTCACTGCCGCCACCATGTATTTGGCCTTCTCCTTGTGCTCCGCCCGCTTCGGGCACCGCTCTTC
TGTCTACGACGACTTTTCCGACGAGGAGGATGATAACAAGGAGAATATTGACAACATGGGTTACGTCAAGATCCCCGACGGCGCTGCTCCGGCTAAATCGGTGGGGTAG
Protein sequenceShow/hide protein sequence
MASTPPPIRLFLLFLLTISLSTSSHARPCKSLFVSFSLLRHRTLDSRNPFSDMAVIVDITEFKSFAADDETQFPSPLDLPRQDYVASHQQHPDLGFSYDFSSLRDRTMDI
LSVVVALLFGVGCGALTAATMYLAFSLCSARFGHRSSVYDDFSDEEDDNKENIDNMGYVKIPDGAAPAKSVG