; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014808 (gene) of Chayote v1 genome

Gene IDSed0014808
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L35-like
Genome locationLG13:2062071..2062424
RNA-Seq ExpressionSed0014808
SyntenySed0014808
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR045059 - 60S ribosomal protein L35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601021.1 Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sororia]7.6e-3378.63Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQKSKADLLTQLKDLK +LSLLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

KAG6602348.1 Dirigent protein 25, partial [Cucurbita argyrosperma subsp. sororia]7.6e-3378.63Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQKSKADLLTQLKDLK +LSLLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

KAG7031634.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-3378.63Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQKSKADLLTQLKDLK +LSLLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

XP_022923169.1 60S ribosomal protein L35-like [Cucurbita moschata]7.6e-3378.63Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQKSKADLLTQLKDLK +LSLLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]7.6e-3378.63Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQKSKADLLTQLKDLK +LSLLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

TrEMBL top hitse value%identityAlignment
A0A6J1E5L3 60S ribosomal protein L35-like3.7e-3378.63Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQKSKADLLTQLKDLK +LSLLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

A0A6J1FH81 60S ribosomal protein L353.7e-3378.63Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQKSKADLLTQLKDLK +LSLLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

A0A6J1FSL2 60S ribosomal protein L35-like8.1e-3377.78Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQKSKADLLTQLKDLK +L+LLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

A0A6J1JTF2 60S ribosomal protein L35-like1.4e-3277.78Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR KSKADLLTQLKDLK +LSLLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L353.7e-3378.63Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQKSKADLLTQLKDLK +LSLLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYKKKKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MYY LRKYAIKV
Subjt:  -----MYYSLRKYAIKV

SwissProt top hitse value%identityAlignment
O80626 60S ribosomal protein L35-21.3e-3070.09Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVV-----SALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR+KSKADL  QLK+ K +L+LLR AKVT GAPNKLSKIKVV+ SIAQVLTV+     SALR AYK KKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVV-----SALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV

Q9LZ41 60S ribosomal protein L35-44.8e-3069.23Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVV-----SALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR KSK DL  QLK+ K +L+LLR AKVT GAPNKLSKIKVV+ SIAQVLTV+     SALR AYK KKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVV-----SALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV

Q9M3D2 60S ribosomal protein L35-34.8e-3070.09Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR KSK+DL TQLK+LK +L+ LR AKVT GAPNKLSKIKVV+ SIAQVLTV      SALR AYK KKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV

Q9M5L0 60S ribosomal protein L353.0e-3271.79Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELRQK+KA+LL QLKDLK +L+LLR AKVT GAPNKLSKIKVV+LSIAQVLTV+S     ALR AYK KK LPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVS-----ALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV

Q9SF53 60S ribosomal protein L35-12.1e-3070.09Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR+KSK+DL  QLK+LK +L+LLR AKVT GAPNKLSKIKVV+ SIAQVLTV      SALR AYK KKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV

Arabidopsis top hitse value%identityAlignment
AT2G39390.1 Ribosomal L29 family protein8.9e-3270.09Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVV-----SALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR+KSKADL  QLK+ K +L+LLR AKVT GAPNKLSKIKVV+ SIAQVLTV+     SALR AYK KKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVV-----SALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein1.5e-3170.09Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR+KSK+DL  QLK+LK +L+LLR AKVT GAPNKLSKIKVV+ SIAQVLTV      SALR AYK KKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein3.4e-3170.09Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR KSK+DL TQLK+LK +L+ LR AKVT GAPNKLSKIKVV+ SIAQVLTV      SALR AYK KKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein3.4e-3170.09Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR KSK+DL TQLK+LK +L+ LR AKVT GAPNKLSKIKVV+ SIAQVLTV      SALR AYK KKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTV-----VSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein3.4e-3169.23Show/hide
Query:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVV-----SALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------
        HELR KSK DL  QLK+ K +L+LLR AKVT GAPNKLSKIKVV+ SIAQVLTV+     SALR AYK KKLLPLDLRPKKTRAIRRRLTKHQ       
Subjt:  HELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVV-----SALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQ-------

Query:  -----MYYSLRKYAIKV
             MY+ +RKYAIKV
Subjt:  -----MYYSLRKYAIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACATTATTTCATGAGCTGAGACAGAAGTCGAAGGCAGATCTTTTGACCCAACTTAAGGACCTTAAGGACAAGCTTTCTCTCCTCCGCGACGCTAAGGTCACTAG
TGGTGCTCCCAACAAGCTCTCCAAAATTAAAGTAGTGAAGTTGTCAATTGCTCAGGTGTTGACAGTGGTTTCTGCTCTTAGGGGGGCCTACAAGAAGAAGAAGCTTTTGC
CTCTTGATTTGCGCCCTAAGAAAACTAGGGCTATTCGTAGAAGGCTCACCAAGCACCAAATGTACTATTCGTTGAGGAAGTATGCCATTAAGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCACATTATTTCATGAGCTGAGACAGAAGTCGAAGGCAGATCTTTTGACCCAACTTAAGGACCTTAAGGACAAGCTTTCTCTCCTCCGCGACGCTAAGGTCACTAG
TGGTGCTCCCAACAAGCTCTCCAAAATTAAAGTAGTGAAGTTGTCAATTGCTCAGGTGTTGACAGTGGTTTCTGCTCTTAGGGGGGCCTACAAGAAGAAGAAGCTTTTGC
CTCTTGATTTGCGCCCTAAGAAAACTAGGGCTATTCGTAGAAGGCTCACCAAGCACCAAATGTACTATTCGTTGAGGAAGTATGCCATTAAGGTGTAG
Protein sequenceShow/hide protein sequence
MSTLFHELRQKSKADLLTQLKDLKDKLSLLRDAKVTSGAPNKLSKIKVVKLSIAQVLTVVSALRGAYKKKKLLPLDLRPKKTRAIRRRLTKHQMYYSLRKYAIKV