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Sed0014823 (gene) of Chayote v1 genome

Gene IDSed0014823
OrganismSechium edule (Chayote v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG12:6466782..6468700
RNA-Seq ExpressionSed0014823
SyntenySed0014823
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650335.1 hypothetical protein Csa_010297 [Cucumis sativus]4.3e-4267.7Show/hide
Query:  MDYGKQGSWDSSCDEYEPHGQ-HRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTA
        MD+GKQGSWDSS DEYE     H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK   AK  NFIHSSSS      Q FPP + TQPT 
Subjt:  MDYGKQGSWDSSCDEYEPHGQ-HRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTA

Query:  ESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGGDGGKN
         SY   PPPPSYRMYFDT A    NFPIH Q +     ++ELLGANLSL+IDQ  G   KN
Subjt:  ESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGGDGGKN

XP_004134420.3 zinc finger protein 10 [Cucumis sativus]4.3e-4267.7Show/hide
Query:  MDYGKQGSWDSSCDEYEPHGQ-HRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTA
        MD+GKQGSWDSS DEYE     H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK   AK  NFIHSSSS      Q FPP + TQPT 
Subjt:  MDYGKQGSWDSSCDEYEPHGQ-HRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTA

Query:  ESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGGDGGKN
         SY   PPPPSYRMYFDT A    NFPIH Q +     ++ELLGANLSL+IDQ  G   KN
Subjt:  ESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGGDGGKN

XP_008439363.1 PREDICTED: zinc finger protein 7 [Cucumis melo]6.0e-4470.7Show/hide
Query:  MDYGKQGSWDSSCDEYEP--HGQHRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPT
        MD+GKQGSWDSS DEYEP  H  H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK   AK  NFIHSSSS      Q FPP + TQPT
Subjt:  MDYGKQGSWDSSCDEYEP--HGQHRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPT

Query:  AESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGG
          SY   PPPPSYRMYFDT A    NFPIH Q +     ++ELLGANLSLQIDQN G
Subjt:  AESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGG

XP_022151484.1 zinc finger protein 8-like [Momordica charantia]1.5e-4268.87Show/hide
Query:  MDYGKQGSWDSSCDEYEPHGQHRKDD-DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS----QNFPPVSTQPTAESYPPP
        MD+GKQGSWDSS DEY P  Q  KD+ DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK   AK+ N I SSSS    Q FPP+S  P A  YPPP
Subjt:  MDYGKQGSWDSSCDEYEPHGQHRKDD-DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS----QNFPPVSTQPTAESYPPP

Query:  P------SYRMYFDTTAAMAGNFPIHEQRSQ--DEELLGANLSLQIDQNGG
        P      +YRMYFDTTA  A N+PIH  RSQ  +E+LLGANL+LQIDQ  G
Subjt:  P------SYRMYFDTTAAMAGNFPIHEQRSQ--DEELLGANLSLQIDQNGG

XP_038877191.1 zinc finger protein 7-like [Benincasa hispida]4.9e-4672.55Show/hide
Query:  MDYGKQGSWDSSCDEYEPHGQHR-KDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS-------QNFPPVSTQPTA
        MD+GKQGSWDSS DEYEP   H  KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK   AK  NFIHSSSS       Q FPP+ TQPT 
Subjt:  MDYGKQGSWDSSCDEYEPHGQHR-KDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS-------QNFPPVSTQPTA

Query:  ESYPPPPSYRMYFDTTAAMAGNFPIHEQ-RSQ---DEELLGANLSLQIDQNGG
          YPPPPSYRMYFDT AA   NFPIH Q RS    +++LLGANLSLQIDQN G
Subjt:  ESYPPPPSYRMYFDTTAAMAGNFPIHEQ-RSQ---DEELLGANLSLQIDQNGG

TrEMBL top hitse value%identityAlignment
A0A0A0L4H6 C2H2-type domain-containing protein2.7e-4266.07Show/hide
Query:  MDYGKQGSWDSSCDEYEPHGQ-HRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTA
        MD+GKQGSWDSS DEYE     H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK   AK  NFIHSSSS      Q FPP + TQPT 
Subjt:  MDYGKQGSWDSSCDEYEPHGQ-HRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTA

Query:  ESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNG----GDGGKNGVV
         SY   PPPPSYRMYFDT A    NFPIH Q +     ++ELLGANLSL+IDQ       DG KNG +
Subjt:  ESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNG----GDGGKNGVV

A0A1S3AZA2 zinc finger protein 72.9e-4470.7Show/hide
Query:  MDYGKQGSWDSSCDEYEP--HGQHRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPT
        MD+GKQGSWDSS DEYEP  H  H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK   AK  NFIHSSSS      Q FPP + TQPT
Subjt:  MDYGKQGSWDSSCDEYEP--HGQHRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPT

Query:  AESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGG
          SY   PPPPSYRMYFDT A    NFPIH Q +     ++ELLGANLSLQIDQN G
Subjt:  AESY---PPPPSYRMYFDTTAAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGG

A0A6J1DD81 zinc finger protein 8-like7.1e-4368.87Show/hide
Query:  MDYGKQGSWDSSCDEYEPHGQHRKDD-DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS----QNFPPVSTQPTAESYPPP
        MD+GKQGSWDSS DEY P  Q  KD+ DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK   AK+ N I SSSS    Q FPP+S  P A  YPPP
Subjt:  MDYGKQGSWDSSCDEYEPHGQHRKDD-DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSS----QNFPPVSTQPTAESYPPP

Query:  P------SYRMYFDTTAAMAGNFPIHEQRSQ--DEELLGANLSLQIDQNGG
        P      +YRMYFDTTA  A N+PIH  RSQ  +E+LLGANL+LQIDQ  G
Subjt:  P------SYRMYFDTTAAMAGNFPIHEQRSQ--DEELLGANLSLQIDQNGG

A0A6J1GCF2 transcriptional regulator SUPERMAN-like1.5e-4071.13Show/hide
Query:  MDYGKQGSWDSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRM
        MD+GKQGSWDS  DEYE H +  + D+D TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK  +R++  H S+ Q FP +S+QPTA   P PPSYRM
Subjt:  MDYGKQGSWDSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRM

Query:  YFDTT-AAMAGNFPIHEQRSQ---DEELLGANLSLQIDQNGG
        YFDTT AAMA N PIH+QRS+   +E LLGANLSLQIDQN G
Subjt:  YFDTT-AAMAGNFPIHEQRSQ---DEELLGANLSLQIDQNGG

A0A6J1IGJ1 zinc finger protein 11-like1.1e-4070.42Show/hide
Query:  MDYGKQGSWDSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRM
        MD+GKQG WDS  DEYE H +  + D+D TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK    S+    S+ Q FP +STQPTA   P PPSYRM
Subjt:  MDYGKQGSWDSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRM

Query:  YFDTT-AAMAGNFPIHEQRSQ---DEELLGANLSLQIDQNGG
        YFDTT AAMA NFPIH+QRS+   +E LLGANLSLQ+DQN G
Subjt:  YFDTT-AAMAGNFPIHEQRSQ---DEELLGANLSLQIDQNGG

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 104.6e-0741.1Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRMYFDT
        R Y C+FC+R F +AQALGGHMN+HR+DRA+ K A        SSS   P   +   +++      Y + F+T
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRMYFDT

Q38895 Transcriptional regulator SUPERMAN2.7e-0747.69Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFP-PVSTQPTAESYPPP
        R Y C+FCKR F +AQALGGHMN+HR+DRA+ +  ++S    S+ S  +P P  +  T  + PPP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFP-PVSTQPTAESYPPP

Q9LHS9 Probable transcriptional regulator RABBIT EARS4.6e-0752.94Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPP
        R Y C+FC R F +AQALGGHMN+HR+DRA+    K+ +   SS+ Q  PP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPP

Q9SLB8 Zinc finger protein 115.1e-0635.42Show/hide
Query:  YECTFCKRGFTNAQALGGHMNIHRKDRAKAK---------------GAKRSNFIHSSSSQ----NFPPVSTQPTAESYPPPPSYRMYFDTTAAMAG
        Y C+FC+R F +AQALGGHMN+HR+DRAK +                    NF  SSSS     +  P  T   +++ P P +     D+T +  G
Subjt:  YECTFCKRGFTNAQALGGHMNIHRKDRAKAK---------------GAKRSNFIHSSSSQ----NFPPVSTQPTAESYPPPPSYRMYFDTTAAMAG

Q9SR34 Transcriptional regulator TAC12.5e-0852.73Show/hide
Query:  DSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK
        D   D    +     DD     R Y C+FC RGF+NAQALGGHMNIHR+DRAK +
Subjt:  DSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK

Arabidopsis top hitse value%identityAlignment
AT3G09290.1 telomerase activator11.8e-0952.73Show/hide
Query:  DSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK
        D   D    +     DD     R Y C+FC RGF+NAQALGGHMNIHR+DRAK +
Subjt:  DSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.9e-0847.69Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFP-PVSTQPTAESYPPP
        R Y C+FCKR F +AQALGGHMN+HR+DRA+ +  ++S    S+ S  +P P  +  T  + PPP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFP-PVSTQPTAESYPPP

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein1.5e-0836.92Show/hide
Query:  KRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHS------------SSSQNFP-PVSTQPTAESY------PP--PPSYRMYFDTTAAMA
        +R Y+C  CKRGFTN QALGGH NIHR++R +   +  S+  HS            SSS NF  P    PT ESY      PP  P     YF ++++  
Subjt:  KRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHS------------SSSQNFP-PVSTQPTAESY------PP--PPSYRMYFDTTAAMA

Query:  GNFPIHEQRSQDEELLGANLSLQIDQNGGD
        G     +  S D      NLSL +     D
Subjt:  GNFPIHEQRSQDEELLGANLSLQIDQNGGD

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein7.1e-1180Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGA
        RPY C FC+RGF+NAQALGGHMNIHRKDRAK + A
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGA

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein1.1e-1186.11Show/hide
Query:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAK
        T+R YECTFCKRGFTNAQALGGHMNIHR+DR  KAK
Subjt:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTATGGAAAACAAGGGAGCTGGGACAGTTCTTGCGACGAATACGAGCCACACGGTCAGCATCGAAAAGATGACGATGACCCGACAAAACGCCCATACGAGTGCAC
ATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCCCTTGGTGGCCACATGAACATTCACCGCAAAGACAGAGCCAAAGCCAAAGGCGCCAAACGCAGCAATTTCATTCATT
CCTCTTCTTCCCAAAATTTCCCTCCTGTTTCGACTCAACCGACCGCGGAATCTTACCCGCCGCCTCCGTCGTATCGAATGTACTTCGACACGACGGCGGCTATGGCCGGG
AACTTCCCGATTCACGAGCAGCGATCGCAGGACGAGGAGCTTCTCGGGGCGAATCTCAGCCTCCAAATTGATCAAAATGGGGGAGATGGTGGAAAAAATGGAGTGGTTTG
GTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTATGGAAAACAAGGGAGCTGGGACAGTTCTTGCGACGAATACGAGCCACACGGTCAGCATCGAAAAGATGACGATGACCCGACAAAACGCCCATACGAGTGCAC
ATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCCCTTGGTGGCCACATGAACATTCACCGCAAAGACAGAGCCAAAGCCAAAGGCGCCAAACGCAGCAATTTCATTCATT
CCTCTTCTTCCCAAAATTTCCCTCCTGTTTCGACTCAACCGACCGCGGAATCTTACCCGCCGCCTCCGTCGTATCGAATGTACTTCGACACGACGGCGGCTATGGCCGGG
AACTTCCCGATTCACGAGCAGCGATCGCAGGACGAGGAGCTTCTCGGGGCGAATCTCAGCCTCCAAATTGATCAAAATGGGGGAGATGGTGGAAAAAATGGAGTGGTTTG
GTAG
Protein sequenceShow/hide protein sequence
MDYGKQGSWDSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRMYFDTTAAMAG
NFPIHEQRSQDEELLGANLSLQIDQNGGDGGKNGVVW