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Sed0014826 (gene) of Chayote v1 genome

Gene IDSed0014826
OrganismSechium edule (Chayote v1)
Descriptionmetallothionein-like protein type 2
Genome locationLG02:44696812..44698052
RNA-Seq ExpressionSed0014826
SyntenySed0014826
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000347 - Metallothionein, family 15, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAD26571.1 type-2 metallothionein [Citrullus lanatus]1.3e-2675.64Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CGS C GC M+PD+SFSE TATI+TFVVGFAP KMSFEVAEMGAE +GCKCG +C CDPC CK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

XP_004137793.1 metallothionein-like protein type 2 isoform X2 [Cucumis sativus]1.0e-2675.64Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC  +PDLSFSET+ATI+TFVVGFAPQKMS+EVAEMGAE +GCKCG +C CDPCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

XP_008442554.1 PREDICTED: metallothionein-like protein type 2 [Cucumis melo]4.6e-2776.92Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC  +PDLSFSETTATI+TFVVGFAPQKMS+EVAEMGAE +GCKCG +C CDPCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

XP_022949247.1 metallothionein-like protein type 2 [Cucurbita moschata]1.3e-2675.64Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC M+PD+SFSETTATI+TFVVG APQKMSFEVAEMGAE +GCKCG +C CDPC CK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

XP_038906044.1 metallothionein-like protein type 2 [Benincasa hispida]9.3e-2878.21Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CGS C GC M+PD+SFSETTATI+TFVVGFAPQKMSFEVAEMGAE +GCKCG +C CDPC CK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

TrEMBL top hitse value%identityAlignment
A0A0A0LAK4 Uncharacterized protein5.0e-2775.64Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC  +PDLSFSET+ATI+TFVVGFAPQKMS+EVAEMGAE +GCKCG +C CDPCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

A0A1S3B6L7 metallothionein-like protein type 22.2e-2776.92Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC  +PDLSFSETTATI+TFVVGFAPQKMS+EVAEMGAE +GCKCG +C CDPCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

A0A6J1GBI9 metallothionein-like protein type 26.5e-2775.64Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC M+PD+SFSETTATI+TFVVG APQKMSFEVAEMGAE +GCKCG +C CDPC CK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

A0A6J1I8Z4 metallothionein-like protein type 26.5e-2775.64Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC M+PD+SFSETTATI+TFVVG APQKMSFEVAEMGAE +GCKCG +C CDPC CK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

Q6I674 Type-2 metallothionein6.5e-2775.64Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CGS C GC M+PD+SFSE TATI+TFVVGFAP KMSFEVAEMGAE +GCKCG +C CDPC CK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

SwissProt top hitse value%identityAlignment
P25860 Metallothionein-like protein 2A2.7e-2260.49Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAP-QKMSFEVA--EMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC MYPDL FS  T T +TFV+G AP  K  +E +     AE D CKCG+DCKCDPCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAP-QKMSFEVA--EMGAEGDGCKCGADCKCDPCTCK

P43390 Metallothionein-like protein type 21.4e-2670.89Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMG-AEGDGCKCGADCKCDPCTCK
        MSCC GKCGCG  C CGS C GCGMYPDLS+SE T T +T +VG APQK  FE +EMG A  +GCKCG+DCKCDPCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMG-AEGDGCKCGADCKCDPCTCK

Q39459 Metallothionein-like protein 21.6e-2262.5Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEM--GAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CGS C GC MYPD+S++E T T +T V+G A  K  FE AEM  GAE DGCKCG++C C+PCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEM--GAEGDGCKCGADCKCDPCTCK

Q40158 Metallothionein-like protein type 2 B2.7e-2256.25Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMG---AEGDGCKCGADCKCDPCTC
        MSCC G CGCG  C+CG+ C GC MYPD+S++E++ T +T V+G  P+K SF   EMG      +GCKCG+DCKC+PCTC
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMG---AEGDGCKCGADCKCDPCTC

Q41657 Metallothionein-like protein type 21.4e-2361.54Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CGS C GC MY DLS++E+T T +T ++G   +K  +E AEMGAE DGCKCGA+C C+PCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK

Arabidopsis top hitse value%identityAlignment
AT3G09390.1 metallothionein 2A1.9e-2360.49Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAP-QKMSFEVA--EMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC MYPDL FS  T T +TFV+G AP  K  +E +     AE D CKCG+DCKCDPCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAP-QKMSFEVA--EMGAEGDGCKCGADCKCDPCTCK

AT5G02380.1 metallothionein 2B4.2e-1856.79Show/hide
Query:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMS-FEVA--EMGAEGDGCKCGADCKCDPCTCK
        MSCC G CGCG  C+CG+ C GC  YPDL   E TAT +T V+G AP   S +E +     AE D CKCG+DCKC+PCTCK
Subjt:  MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMS-FEVA--EMGAEGDGCKCGADCKCDPCTCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTGCTGTTCTGGCAAATGTGGATGCGGCAAGGACTGCCAATGCGGAAGCAGCTGTAACGGGTGCGGTATGTACCCTGATCTGAGCTTCTCTGAGACCACCGCTAC
GATCCAGACCTTCGTCGTCGGTTTCGCTCCTCAGAAGATGTCGTTCGAGGTTGCAGAGATGGGAGCCGAGGGCGACGGCTGCAAGTGCGGTGCAGACTGCAAATGCGATC
CATGCACCTGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
TTCAAACTCGTTCAATTGCGAGAAGTTTCAGTTTGATTTCGAAAACTAAATTCCCAATCTCTTTCGTTCTTCGCTGTTCATCGTCGAAAATGTCGTGCTGTTCTGGCAAA
TGTGGATGCGGCAAGGACTGCCAATGCGGAAGCAGCTGTAACGGGTGCGGTATGTACCCTGATCTGAGCTTCTCTGAGACCACCGCTACGATCCAGACCTTCGTCGTCGG
TTTCGCTCCTCAGAAGATGTCGTTCGAGGTTGCAGAGATGGGAGCCGAGGGCGACGGCTGCAAGTGCGGTGCAGACTGCAAATGCGATCCATGCACCTGTAAGTGAGGCA
ACGGCTGATCAAATCCTCGCGATCTGAGATGTTCTTCGAGTATGAATAGTATGGGGATCATAATAACAATTATATCGAATCTTAAGTGTTCTTCCTTCTATCGTTGCGTC
GTTAAGAGTCGATTAGCGTTCCTAAATTTTAAATAATAGCAGTTGTGGAGTTGTGGAAAAACTTGTATGCTGTTATGGTTCGCGGATCTTGTTATGGCTTAAGATTTATG
CGTTTAATCTATATATCTGTTTAATTAGCGTTGATTTTCTGTGGTTGGAAATGGTATGTTGTTGTGCTGATATCTGTGGTTGGAAATGAAGAACATAGATAGGATGTCCC
GTAAAATCGGTGATTATCCCTAAGCTGTGTTTGGGCCAATTTATGTAAACGGTCAGAGTTCATTAGAATAATTCAACAGATGTTTGCTCTACGTTTATTATAAATTGTGA
TTATCTAAACTTGAGTGTCAATTTATCTAAACCTACTTGTCGGTTTATCTATACTTTATATATATTATTTTTTGTTACATAA
Protein sequenceShow/hide protein sequence
MSCCSGKCGCGKDCQCGSSCNGCGMYPDLSFSETTATIQTFVVGFAPQKMSFEVAEMGAEGDGCKCGADCKCDPCTCK