; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014831 (gene) of Chayote v1 genome

Gene IDSed0014831
OrganismSechium edule (Chayote v1)
Descriptiondouble-stranded RNA-binding protein 1-like
Genome locationLG04:1462828..1466764
RNA-Seq ExpressionSed0014831
SyntenySed0014831
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0009735 - response to cytokinin (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0010305 - leaf vascular tissue pattern formation (biological process)
GO:0010589 - leaf proximal/distal pattern formation (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0031054 - pre-miRNA processing (biological process)
GO:0035279 - mRNA cleavage involved in gene silencing by miRNA (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0010445 - nuclear dicing body (cellular component)
GO:0042802 - identical protein binding (molecular function)
GO:0035198 - miRNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
InterPro domainsIPR044450 - AtDRB-like, first double-stranded RNA binding domain, plant
IPR031147 - Double-stranded RNA-binding protein
IPR014720 - Double-stranded RNA-binding domain
IPR011907 - Ribonuclease III


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065099.1 double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa]5.1e-12371.88Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVS PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS
        LCKN+LQEYAQKMN+AIPLYQ +K DGPG+G LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLS KSV++ QLTVIP CKR +  DCS
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS

Query:  LKPKTTAKALKTKRGRFKRD-SRKRGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--
        + PK+TA A + K+GRFKR   RKRG  N       N   NID   +EP  TE V +P      +L +DT+ N E RTT+ SSS++D LVSN+QS+ P  
Subjt:  LKPKTTAKALKTKRGRFKRD-SRKRGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--

Query:  ----LGNF---DLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ
             GN     L SNQ+NCA S+ MSFPL+DVQPTC E  N+  GVT ELQ
Subjt:  ----LGNF---DLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ

KAG7029667.1 Double-stranded RNA-binding protein 1 [Cucurbita argyrosperma subsp. argyrosperma]5.2e-12071.23Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHVS+PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRND-VDCSL
        LCKN+LQEYAQKMN+AIPLYQ KK D  G+  LFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL + SV++ QLTVIPCKR +  DCS+
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRND-VDCSL

Query:  KPKTTAKALKTKRGRFKR-DSRKRGLVNEEHRFTSNLELNIDGLNMEPL-ATEVVPMP----SAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESPL-
        KPK TA A + K+GRFK+  S+K+G  N       NLE N D  + EPL  T V P+P    S EL +DT+ N E +TT+ SSS +D LVSNIQS++P  
Subjt:  KPKTTAKALKTKRGRFKR-DSRKRGLVNEEHRFTSNLELNIDGLNMEPL-ATEVVPMP----SAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESPL-

Query:  --GNF------DLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEEL
          GNF         SNQINC+ SD MSFPL DVQ TC E  N+  GVT EL
Subjt:  --GNF------DLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEEL

XP_008444916.1 PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo]4.7e-12171.59Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRY+SLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVS PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS
        LCKN+LQEYAQKMN+AIPLYQ +K DGPG+G LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLS KS++  QLTVIP CKR +  DCS
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS

Query:  LKPKTTAKALKTKRGRFKRD-SRKRGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--
        + PK+TA A + K+GRFKR  SRKRG  N       N   NID   +EP  TE V +P      +L +DT+ N E RTT+ SSS++D LVSN+QS+ P  
Subjt:  LKPKTTAKALKTKRGRFKRD-SRKRGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--

Query:  ----LGN---FDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ
             GN     L SNQ+NCA S+ MSFPL+DVQPTC E  N+  GVT ELQ
Subjt:  ----LGN---FDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ

XP_011649689.1 double-stranded RNA-binding protein 1 isoform X1 [Cucumis sativus]1.9e-12269.94Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVS PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS
        LCKN+LQEYAQKMN+AIPLYQ +K DGPG+G LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLS+KSV++ QLTVIP CKR +  DCS
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS

Query:  LKPKTTAKALKTKRGRFKRDSRKRGLVNEEHRFTSNLEL---NIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP
        +KPK+TA   + K+GRFKR   KRG++         + L   N D   +EP  T VV +P      +L +DT+ N ECRTT+ SS+++D LVSN+QS+ P
Subjt:  LKPKTTAKALKTKRGRFKRDSRKRGLVNEEHRFTSNLEL---NIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP

Query:  L-----------GNFDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ
        L           G F+  SNQ+NCA S+ MS PL+DVQPTC E  N+  GVT ELQ
Subjt:  L-----------GNFDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ

XP_022962385.1 double-stranded RNA-binding protein 1-like [Cucurbita moschata]4.0e-12071.23Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHVS+PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRND-VDCSL
        LCKN+LQEYAQKMN+AIPLYQ KK D  G+  LFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL + SV++ QLTVIPCKR +  DCS+
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRND-VDCSL

Query:  KPKTTAKALKTKRGRFKR-DSRKRGLVNEEHRFTSNLELNIDGLNMEPLATE-VVPMP----SAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESPL-
        KPK TA A + K+GRFK+  S+K+G  N       NLE N D  + EPL T  V P+P    S EL +DT+ N E +TT+ SSS +D LVSNIQS++P  
Subjt:  KPKTTAKALKTKRGRFKR-DSRKRGLVNEEHRFTSNLELNIDGLNMEPLATE-VVPMP----SAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESPL-

Query:  --GNFD------LCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEEL
          GNF         SNQINC+ SD MSFPL DVQ TC E  N+  GVT EL
Subjt:  --GNFD------LCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEEL

TrEMBL top hitse value%identityAlignment
A0A0A0LRU8 Uncharacterized protein9.3e-12369.94Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVS PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS
        LCKN+LQEYAQKMN+AIPLYQ +K DGPG+G LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLS+KSV++ QLTVIP CKR +  DCS
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS

Query:  LKPKTTAKALKTKRGRFKRDSRKRGLVNEEHRFTSNLEL---NIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP
        +KPK+TA   + K+GRFKR   KRG++         + L   N D   +EP  T VV +P      +L +DT+ N ECRTT+ SS+++D LVSN+QS+ P
Subjt:  LKPKTTAKALKTKRGRFKRDSRKRGLVNEEHRFTSNLEL---NIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP

Query:  L-----------GNFDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ
        L           G F+  SNQ+NCA S+ MS PL+DVQPTC E  N+  GVT ELQ
Subjt:  L-----------GNFDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ

A0A1S3BBH0 double-stranded RNA-binding protein 1 isoform X12.3e-12171.59Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRY+SLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVS PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS
        LCKN+LQEYAQKMN+AIPLYQ +K DGPG+G LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLS KS++  QLTVIP CKR +  DCS
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS

Query:  LKPKTTAKALKTKRGRFKRD-SRKRGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--
        + PK+TA A + K+GRFKR  SRKRG  N       N   NID   +EP  TE V +P      +L +DT+ N E RTT+ SSS++D LVSN+QS+ P  
Subjt:  LKPKTTAKALKTKRGRFKRD-SRKRGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--

Query:  ----LGN---FDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ
             GN     L SNQ+NCA S+ MSFPL+DVQPTC E  N+  GVT ELQ
Subjt:  ----LGN---FDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ

A0A5A7VI00 Double-stranded RNA-binding protein 1 isoform X12.4e-12371.88Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVS PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS
        LCKN+LQEYAQKMN+AIPLYQ +K DGPG+G LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLS KSV++ QLTVIP CKR +  DCS
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIP-CKRND-VDCS

Query:  LKPKTTAKALKTKRGRFKRD-SRKRGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--
        + PK+TA A + K+GRFKR   RKRG  N       N   NID   +EP  TE V +P      +L +DT+ N E RTT+ SSS++D LVSN+QS+ P  
Subjt:  LKPKTTAKALKTKRGRFKRD-SRKRGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPS----AELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--

Query:  ----LGNF---DLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ
             GN     L SNQ+NCA S+ MSFPL+DVQPTC E  N+  GVT ELQ
Subjt:  ----LGNF---DLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ

A0A6J1HEW7 double-stranded RNA-binding protein 1-like1.9e-12071.23Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHVS+PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRND-VDCSL
        LCKN+LQEYAQKMN+AIPLYQ KK D  G+  LFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL + SV++ QLTVIPCKR +  DCS+
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRND-VDCSL

Query:  KPKTTAKALKTKRGRFKR-DSRKRGLVNEEHRFTSNLELNIDGLNMEPLATE-VVPMP----SAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESPL-
        KPK TA A + K+GRFK+  S+K+G  N       NLE N D  + EPL T  V P+P    S EL +DT+ N E +TT+ SSS +D LVSNIQS++P  
Subjt:  KPKTTAKALKTKRGRFKR-DSRKRGLVNEEHRFTSNLELNIDGLNMEPLATE-VVPMP----SAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESPL-

Query:  --GNFD------LCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEEL
          GNF         SNQINC+ SD MSFPL DVQ TC E  N+  GVT EL
Subjt:  --GNFD------LCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEEL

A0A6J1K8Y3 double-stranded RNA-binding protein 1-like1.2e-11770.09Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        MPAK+ FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHVS PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRND-VDCSL
        LCKN+LQEYAQKMN+AIPLYQ KK D  G+  LFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL + SV++ QLTVIPCKR +  D S+
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRND-VDCSL

Query:  KPKTTAKALKTKRGRFKRDSRKRGLVNEEHRFTSNLELNID-GLNMEPL-ATEVVPMP----SAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--
        KPKTT  A + K+GRFK+   K+    +      NLE N D   + EPL  T V P+P    S EL +DT+ N E +TT+ SSS +D LVSNIQS++P  
Subjt:  KPKTTAKALKTKRGRFKRDSRKRGLVNEEHRFTSNLELNID-GLNMEPL-ATEVVPMP----SAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESP--

Query:  ----LGNFDL---CSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEEL
            +GN  L    SNQINC+ SD MSFPLSDVQ TC E  N+  G+T EL
Subjt:  ----LGNFDL---CSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEEL

SwissProt top hitse value%identityAlignment
O04492 Double-stranded RNA-binding protein 11.1e-6761.99Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        M + +   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI+  VRY+SLPGF NRKAAEQSAAEVAL EL+KSS+L+  VS PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRNDVDCSLK
        LCKN+LQEYAQKMNYAIPLYQ +K +  G+   F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   + +  +    QLTV+PC++  +  ++ 
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRNDVDCSLK

Query:  PKTTAKALKTKRGRFKRDSRK
         K T K LK ++ +FK+ ++K
Subjt:  PKTTAKALKTKRGRFKRDSRK

Q0DJA3 Double-stranded RNA-binding protein 38.3e-6060.73Show/hide
Query:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEY
        V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++ +  Y SLPGFSNRKAAEQSAAEVALME+ KS   N ++   V ETGLCKN+LQEY
Subjt:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEY

Query:  AQKMNYAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRA-QLTVIPCKRNDVDCSLKPKTTAKALK
        AQKMNYAIP Y   K   G    F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ      S+ S + A +  V+P KR   +   +P  T K LK
Subjt:  AQKMNYAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRA-QLTVIPCKRNDVDCSLKPKTTAKALK

Query:  TKRGRFKRDSRKRGLVNEE
         K+G FK+   KR  + ++
Subjt:  TKRGRFKRDSRKRGLVNEE

Q0DKP4 Double-stranded RNA-binding protein 22.1e-2338.85Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN
        ++K++LQE AQ+     P Y  I+EGP H P F +TV      ++S    S  + AE +AAEVAL ELSK    +   +  + ETG+ KN+LQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN

Query:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP
          +P+Y   + GPG   +F+CTVE+ G+ + G   KTKK+A+  AA  A   ++  P
Subjt:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP

Q0IQN6 Double-stranded RNA-binding protein 82.8e-6060.73Show/hide
Query:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEY
        V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++ +  YDSLPGF NRKAAEQSAAEVALME+ KS   N ++   V ETGLCKN+LQEY
Subjt:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEY

Query:  AQKMNYAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRA-QLTVIPCKRNDVDCSLKPKTTAKALK
        AQKMNYAIP Y   K   G    F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ      S+ S + A +  V+P KR   +   +P  T K LK
Subjt:  AQKMNYAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRA-QLTVIPCKRNDVDCSLKPKTTAKALK

Query:  TKRGRFKRDSRKRGLVNEE
         K+G FK+   KR  + ++
Subjt:  TKRGRFKRDSRKRGLVNEE

Q0IV63 Double-stranded RNA-binding protein 78.3e-6060.73Show/hide
Query:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEY
        V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++ +  YDSLPGF NRKAAEQSAAEVALME+ KS   N ++   V ETGLCKN+LQEY
Subjt:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEY

Query:  AQKMNYAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRA-QLTVIPCKRNDVDCSLKPKTTAKALK
        AQKMNYAIP Y   K   G    F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ      S+ S + A +  V+P KR   +    P  T K LK
Subjt:  AQKMNYAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRA-QLTVIPCKRNDVDCSLKPKTTAKALK

Query:  TKRGRFKRDSRKRGLVNEE
         K+G FK+   KR  + ++
Subjt:  TKRGRFKRDSRKRGLVNEE

Arabidopsis top hitse value%identityAlignment
AT1G09700.1 dsRNA-binding domain-like superfamily protein7.6e-6961.99Show/hide
Query:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG
        M + +   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI+  VRY+SLPGF NRKAAEQSAAEVAL EL+KSS+L+  VS PVHETG
Subjt:  MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETG

Query:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRNDVDCSLK
        LCKN+LQEYAQKMNYAIPLYQ +K +  G+   F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   + +  +    QLTV+PC++  +  ++ 
Subjt:  LCKNMLQEYAQKMNYAIPLYQFKK-DGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRNDVDCSLK

Query:  PKTTAKALKTKRGRFKRDSRK
         K T K LK ++ +FK+ ++K
Subjt:  PKTTAKALKTKRGRFKRDSRK

AT2G28380.1 dsRNA-binding protein 24.5e-2135.96Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN
        ++K++LQE AQ+     P Y  I+EGP H P F +TV      ++S    S  + AE SAAEVAL  LS     +   +  + ETG+ KN+LQE AQ++ 
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN

Query:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTA-----LLAIQSCPTSLSKKSVDRAQLTVI
          +P Y   + G G   +F+ TVE+ GI + G  AK KK+AE  AA  A      LA ++  +    +++D  +  +I
Subjt:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTA-----LLAIQSCPTSLSKKSVDRAQLTVI

AT3G26932.1 dsRNA-binding protein 32.8e-2338.85Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN
        ++K++LQE AQ+     P Y   +EGP H P F ++V      ++S    S  + AE SAAEVAL  LS         +  + ETG+ KN+LQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN

Query:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP
          +P+Y   + GPG    FSCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P
Subjt:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP

AT3G26932.2 dsRNA-binding protein 32.8e-2338.85Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN
        ++K++LQE AQ+     P Y   +EGP H P F ++V      ++S    S  + AE SAAEVAL  LS         +  + ETG+ KN+LQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN

Query:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP
          +P+Y   + GPG    FSCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P
Subjt:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP

AT5G41070.1 dsRNA-binding protein 52.5e-1933.33Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN
        ++K++LQE AQ+     P Y  I+EGP H P F ++V      ++S    S  + AE +AAEV+L  LS         +  + ETG+ KN+LQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMN

Query:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRNDVDCSLKPKTTAKALKT---KR
          +P+Y   + G      FSCTVE+ G+ + G  AKTKK+AE  AA  A  +++   +SL  +  ++ Q  V       V    KPK   +   T   +R
Subjt:  YAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRNDVDCSLKPKTTAKALKT---KR

Query:  GRFKRDSRKRGLV
           ++DS K  L+
Subjt:  GRFKRDSRKRGLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGCCAAGGAAAGATTCCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCCCAAAAAGTGGGACTTCCTACACCTGTTTACGAAACTAT
CAAAGAAGGTCCATCACATGAGCCAACATTTCATTCTACCGTCATCGTTAAGGATGTTAGATATGATTCTTTACCTGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAG
CTGCTGAAGTAGCTCTTATGGAGCTGTCGAAATCGAGTGATCTTAATCCTCATGTCTCCGTACCTGTGCATGAAACAGGACTGTGCAAAAATATGCTTCAGGAGTATGCA
CAGAAGATGAACTATGCAATTCCACTTTATCAGTTTAAAAAAGATGGACCAGGCAAAGGACACCTTTTCTCATGCACAGTAGAAATTGGAGGGATTCGCTACATAGGTGC
AGTAGCAAAAACAAAGAAAGAGGCAGAAATCAAAGCTGCAAGAACTGCTTTGTTAGCAATTCAGTCTTGCCCGACTTCTTTGTCCAAGAAATCTGTCGATCGAGCTCAGC
TCACCGTGATCCCATGCAAGAGAAATGACGTAGATTGCTCACTTAAACCAAAGACTACTGCTAAAGCACTCAAAACAAAGAGAGGGCGATTTAAAAGGGATTCAAGGAAA
AGAGGCCTAGTTAATGAAGAACACAGATTCACTAGCAATCTGGAGTTAAACATTGATGGATTGAACATGGAACCTTTAGCAACCGAGGTTGTTCCAATGCCATCTGCTGA
ATTAGTCAGGGATACAATGCAAAATTTTGAATGTAGAACGACAAACCAAAGCTCGAGCGACGATGACCATCTGGTCTCTAACATCCAAAGCGAGTCTCCGCTCGGTAATT
TCGATCTCTGTTCCAATCAAATAAACTGTGCAATCTCCGATGCAATGAGTTTTCCTCTCTCTGATGTTCAACCTACATGTGATGAAGCTCGGAATATGACTAATGGAGTA
ACAGAGGAGCTTCAATAA
mRNA sequenceShow/hide mRNA sequence
AAAATAGCAGCTCTTTTTTTTCGCGTCCACGAAGGGGTTTAAGCCAAGCGGCACTGTTCTTGATCCCTCTCTCTTTCTCTATCGCCTTTACTAATTCGATTCTCACTTTT
TTTTCCTTGTTCCATCTTCTTCTCAGAGCTATGCCAGCCAAGGAAAGATTCCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCCCAAAAAGT
GGGACTTCCTACACCTGTTTACGAAACTATCAAAGAAGGTCCATCACATGAGCCAACATTTCATTCTACCGTCATCGTTAAGGATGTTAGATATGATTCTTTACCTGGAT
TTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAGCTGTCGAAATCGAGTGATCTTAATCCTCATGTCTCCGTACCTGTGCATGAAACAGGA
CTGTGCAAAAATATGCTTCAGGAGTATGCACAGAAGATGAACTATGCAATTCCACTTTATCAGTTTAAAAAAGATGGACCAGGCAAAGGACACCTTTTCTCATGCACAGT
AGAAATTGGAGGGATTCGCTACATAGGTGCAGTAGCAAAAACAAAGAAAGAGGCAGAAATCAAAGCTGCAAGAACTGCTTTGTTAGCAATTCAGTCTTGCCCGACTTCTT
TGTCCAAGAAATCTGTCGATCGAGCTCAGCTCACCGTGATCCCATGCAAGAGAAATGACGTAGATTGCTCACTTAAACCAAAGACTACTGCTAAAGCACTCAAAACAAAG
AGAGGGCGATTTAAAAGGGATTCAAGGAAAAGAGGCCTAGTTAATGAAGAACACAGATTCACTAGCAATCTGGAGTTAAACATTGATGGATTGAACATGGAACCTTTAGC
AACCGAGGTTGTTCCAATGCCATCTGCTGAATTAGTCAGGGATACAATGCAAAATTTTGAATGTAGAACGACAAACCAAAGCTCGAGCGACGATGACCATCTGGTCTCTA
ACATCCAAAGCGAGTCTCCGCTCGGTAATTTCGATCTCTGTTCCAATCAAATAAACTGTGCAATCTCCGATGCAATGAGTTTTCCTCTCTCTGATGTTCAACCTACATGT
GATGAAGCTCGGAATATGACTAATGGAGTAACAGAGGAGCTTCAATAATCAGTAATTTCTTTCTCCTTGAGGGGCTCATGTTTAGAGGATTAAACTGTGAAATCTATGGA
TTACAATTTACTTGGTTCTGCCGCCAGAGATAAGTAGTAAATAACGGATTATTAGAGATTAGCTTTATTGAAAAGCATGGAGGTTGAGTTTATTGGAATGAAGATCTGGG
ACCAGCCATTTTAAGTGCCAAAAACAATCCAAGAGAAGTTAGCGTTTATTTACGAAAATGCTAAAAATATTAGTTTGATGAAGAAACATTATTGTATGATCAAGAGAGTT
GTGAGCTTATTAGCTTTTTAGTTGAAGTCAGTGCTTTGATATAGTCTTTTTTTAGGGTTTAGGGTTAAAAAAGTGCTTTGATATTGTCTTGGCTGTACCTGCAGTTTCCT
AATATTTATCCTTATACCTTTTAACACCCTACAGAGTGGTAATTATCTGAAAACTATTTTCTTCAGTGTTTAGGTGAAAATTATTTC
Protein sequenceShow/hide protein sequence
MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYA
QKMNYAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRNDVDCSLKPKTTAKALKTKRGRFKRDSRK
RGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPSAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESPLGNFDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGV
TEELQ