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Sed0014856 (gene) of Chayote v1 genome

Gene IDSed0014856
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:30911943..30914045
RNA-Seq ExpressionSed0014856
SyntenySed0014856
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064469.1 hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa]6.2e-1249.44Show/hide
Query:  NVPFSWEAKPGVPK----------------LKYTAIP-----------------YTPPRCRVESARIGKDYLWLEAYSDEFASSLGFGC
        NVPFSWEAKPGVPK                LK  + P                 Y+PPRCR ESAR+ KD+LWLEAYSD  ASS GFGC
Subjt:  NVPFSWEAKPGVPK----------------LKYTAIP-----------------YTPPRCRVESARIGKDYLWLEAYSDEFASSLGFGC

KAG6608406.1 hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia]7.0e-1645.28Show/hide
Query:  ANSDPIEFDFEILQTKTNVPFSWEAKPGVPKLKYT---------------------------------AIPYTPPRCRVESARIGKDYLWLEAYSDEFAS
        ++S P++FDFE+LQT+TNVPFSWEAKPGVPKL+ +                                 AIP + PR +  SAR+ K++LWL+AYSD+F S
Subjt:  ANSDPIEFDFEILQTKTNVPFSWEAKPGVPKLKYT---------------------------------AIPYTPPRCRVESARIGKDYLWLEAYSDEFAS

Query:  SLGFGC
        S GFGC
Subjt:  SLGFGC

KAG7037747.1 hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-1645.28Show/hide
Query:  ANSDPIEFDFEILQTKTNVPFSWEAKPGVPKLKYT---------------------------------AIPYTPPRCRVESARIGKDYLWLEAYSDEFAS
        ++S P++FDFE+LQT+TNVPFSWEAKPGVPKL+ +                                 AIP + PR +  SAR+ K++LWL+AYSD+F S
Subjt:  ANSDPIEFDFEILQTKTNVPFSWEAKPGVPKLKYT---------------------------------AIPYTPPRCRVESARIGKDYLWLEAYSDEFAS

Query:  SLGFGC
        S GFGC
Subjt:  SLGFGC

XP_004141298.1 uncharacterized protein LOC101203728 [Cucumis sativus]8.9e-1951.38Show/hide
Query:  LANSDPIEFDFEILQTKTNVPFSWEAKPGVPK------------------LKYTAIP-----------------YTPPRCRVESARIGKDYLWLEAYSDE
        +A+S PIE DFE L TKTNVPFSWEAKPGVPK                  LK  + P                 Y+PPRCR ESAR+ KD+LWLEAYSD 
Subjt:  LANSDPIEFDFEILQTKTNVPFSWEAKPGVPK------------------LKYTAIP-----------------YTPPRCRVESARIGKDYLWLEAYSDE

Query:  FASSLGFGC
         ASS GFGC
Subjt:  FASSLGFGC

TrEMBL top hitse value%identityAlignment
A0A0A0KZZ9 Uncharacterized protein4.3e-1951.38Show/hide
Query:  LANSDPIEFDFEILQTKTNVPFSWEAKPGVPK------------------LKYTAIP-----------------YTPPRCRVESARIGKDYLWLEAYSDE
        +A+S PIE DFE L TKTNVPFSWEAKPGVPK                  LK  + P                 Y+PPRCR ESAR+ KD+LWLEAYSD 
Subjt:  LANSDPIEFDFEILQTKTNVPFSWEAKPGVPK------------------LKYTAIP-----------------YTPPRCRVESARIGKDYLWLEAYSDE

Query:  FASSLGFGC
         ASS GFGC
Subjt:  FASSLGFGC

A0A5D3D9E3 Uncharacterized protein3.0e-1249.44Show/hide
Query:  NVPFSWEAKPGVPK----------------LKYTAIP-----------------YTPPRCRVESARIGKDYLWLEAYSDEFASSLGFGC
        NVPFSWEAKPGVPK                LK  + P                 Y+PPRCR ESAR+ KD+LWLEAYSD  ASS GFGC
Subjt:  NVPFSWEAKPGVPK----------------LKYTAIP-----------------YTPPRCRVESARIGKDYLWLEAYSDEFASSLGFGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGCGAATTCAGATCCAATCGAGTTCGATTTCGAAATCCTACAAACGAAGACGAACGTACCTTTCTCTTGGGAGGCCAAGCCGGGCGTTCCGAAGCTGAAATA
CACGGCGATTCCCTACACTCCGCCGCGATGCAGGGTGGAGAGTGCGAGGATCGGTAAGGATTACTTGTGGCTTGAAGCATATTCCGATGAGTTTGCATCGTCTCTAGGGT
TTGGGTGCGTCGTTCTCCACCGCCGGCTCCGCCATGTTCTTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGGCGAATTCAGATCCAATCGAGTTCGATTTCGAAATCCTACAAACGAAGACGAACGTACCTTTCTCTTGGGAGGCCAAGCCGGGCGTTCCGAAGCTGAAATA
CACGGCGATTCCCTACACTCCGCCGCGATGCAGGGTGGAGAGTGCGAGGATCGGTAAGGATTACTTGTGGCTTGAAGCATATTCCGATGAGTTTGCATCGTCTCTAGGGT
TTGGGTGCGTCGTTCTCCACCGCCGGCTCCGCCATGTTCTTCCATGA
Protein sequenceShow/hide protein sequence
MALANSDPIEFDFEILQTKTNVPFSWEAKPGVPKLKYTAIPYTPPRCRVESARIGKDYLWLEAYSDEFASSLGFGCVVLHRRLRHVLP