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Sed0014859 (gene) of Chayote v1 genome

Gene IDSed0014859
OrganismSechium edule (Chayote v1)
DescriptionLipoteichoic acid synthase
Genome locationLG01:18026387..18028831
RNA-Seq ExpressionSed0014859
SyntenySed0014859
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267529.1 unnamed protein product [Prunus armeniaca]6.7e-0970.83Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK
        M LM+GEPLV K+AV AKY+VLPGAM AAL+YSPPDY   KND K  K
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK

KAF4352412.1 hypothetical protein G4B88_018844 [Cannabis sativa]1.5e-0865.38Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNKPGPS
        M  +KGEPL+RK+A+ +KY VLPGAM AALVYSPPD+VYY N    N P PS
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNKPGPS

KAG7024085.1 hypothetical protein SDJN02_12898, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-1568.57Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRN-KPGPSGYAGLHLQSCIPLVLIM
        M LM+GEPLVRK+AVFAKY VLP AMAAAL+YSPPDY ++ +D   N    PS + GLHLQSCIPL+LIM
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRN-KPGPSGYAGLHLQSCIPLVLIM

KAG7037970.1 hypothetical protein SDJN02_01603, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-1288.64Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDD
        M LMKGEPLVRK+AVFAKY+VLPGAMAAALVYSPPDY Y+KNDD
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDD

KGN55532.1 hypothetical protein Csa_011995 [Cucumis sativus]1.6e-1072.92Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK
        M LMKGEPL+RK+AVFA Y+VLPGAMAAAL+YSPPDY+Y K ++K +K
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK

TrEMBL top hitse value%identityAlignment
A0A0A0L4N8 Uncharacterized protein7.7e-1172.92Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK
        M LMKGEPL+RK+AVFA Y+VLPGAMAAAL+YSPPDY+Y K ++K +K
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK

A0A2R6PZ99 DNA helicase2.1e-0871.11Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDK
        MT M+GEPLV K+AV AKY VLPGAM AAL+YSPPDY Y K  D+
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDK

A0A6J5TUT5 Uncharacterized protein3.2e-0970.83Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK
        M LM+GEPLV K+AV AKY+VLPGAM AAL+YSPPDY   KND K  K
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK

A0A7J6E203 Uncharacterized protein7.2e-0965.38Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNKPGPS
        M  +KGEPL+RK+A+ +KY VLPGAM AALVYSPPD+VYY N    N P PS
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNKPGPS

A0A7N2M7F2 Uncharacterized protein2.3e-0764.58Show/hide
Query:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK
        M  M+GEPLV K+AV AKY+VLPGAMAAA++YSPP Y  Y N  K  K
Subjt:  MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTGATGAAGGGAGAGCCGCTGGTGAGGAAGGTCGCCGTGTTTGCCAAGTACCTTGTTCTTCCGGGAGCCATGGCCGCCGCTCTCGTTTACTCTCCTCCCGATTA
CGTCTACTACAAGAATGACGACAAACGGAATAAACCAGGGCCTTCTGGTTATGCAGGCTTGCACTTGCAGAGTTGTATCCCTCTTGTGTTGATAATGGTTTCATGTGGGA
AGAGAAGTTTATCTAAAACTCTTGCAACTCCAGCAATTTTAGAATCCAAACGTGATTTTGATGGCCCCATCCCGTACTTGTTTTATTTTGTCATTACTCTTGCTGTGATG
TGGAGTAGATGTCTGTTGTCTGATACATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTTGATGAAGGGAGAGCCGCTGGTGAGGAAGGTCGCCGTGTTTGCCAAGTACCTTGTTCTTCCGGGAGCCATGGCCGCCGCTCTCGTTTACTCTCCTCCCGATTA
CGTCTACTACAAGAATGACGACAAACGGAATAAACCAGGGCCTTCTGGTTATGCAGGCTTGCACTTGCAGAGTTGTATCCCTCTTGTGTTGATAATGGTTTCATGTGGGA
AGAGAAGTTTATCTAAAACTCTTGCAACTCCAGCAATTTTAGAATCCAAACGTGATTTTGATGGCCCCATCCCGTACTTGTTTTATTTTGTCATTACTCTTGCTGTGATG
TGGAGTAGATGTCTGTTGTCTGATACATACTAA
Protein sequenceShow/hide protein sequence
MTLMKGEPLVRKVAVFAKYLVLPGAMAAALVYSPPDYVYYKNDDKRNKPGPSGYAGLHLQSCIPLVLIMVSCGKRSLSKTLATPAILESKRDFDGPIPYLFYFVITLAVM
WSRCLLSDTY