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Sed0014860 (gene) of Chayote v1 genome

Gene IDSed0014860
OrganismSechium edule (Chayote v1)
Descriptionconserved peptide upstream open reading frame 37
Genome locationLG06:8193560..8193861
RNA-Seq ExpressionSed0014860
SyntenySed0014860
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB57311.1 hypothetical protein L484_011398 [Morus notabilis]9.7e-2196.23Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFR LLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

KAE8645821.1 hypothetical protein Csa_023855, partial [Cucumis sativus]5.7e-2196.23Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQAEYFR LLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

KAG7014898.1 hypothetical protein SDJN02_22529 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2198.11Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAA+QTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

XP_016901746.1 PREDICTED: uncharacterized protein LOC103495379 isoform X2 [Cucumis melo]5.7e-2196.23Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQAEYFR LLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

XP_016902954.1 PREDICTED: uncharacterized protein LOC103501164 isoform X2 [Cucumis melo]5.7e-2196.23Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAA+QTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFRQLLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

TrEMBL top hitse value%identityAlignment
A0A0A0K458 Uncharacterized protein2.8e-2196.23Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQAEYFR LLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

A0A0A0KVT2 Uncharacterized protein2.1e-2196.23Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAA+QTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQA+YFRQLLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

A0A1S4E0J3 uncharacterized protein LOC103495379 isoform X22.8e-2196.23Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAASQTRFRALKHENGIAGKPTIIV+VIACFQPLQNCQAEYFR LLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

A0A1S4E402 uncharacterized protein LOC103501164 isoform X22.8e-2196.23Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAA+QTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFRQLLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

W9R7U4 Uncharacterized protein4.7e-2196.23Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQAEYFR LLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29951.1 conserved peptide upstream open reading frame 355.2e-0478.26Show/hide
Query:  IACFQPLQNCQAEYFRQLLKPVT
        IA +Q +Q CQAEYFRQLLKPVT
Subjt:  IACFQPLQNCQAEYFRQLLKPVT

AT5G09461.1 conserved peptide upstream open reading frame 435.3e-1770.37Show/hide
Query:  MVCQAASQTRFRALKHE-NGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MV Q+A QTRFR  K+E NG + +PTI+VRVIACFQP+ NCQAEYFR +LKPVT
Subjt:  MVCQAASQTRFRALKHE-NGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

AT5G50011.1 conserved peptide upstream open reading frame 372.6e-1981.13Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQ+A QTRFR LKHE+GI G   I+VRVIACFQPLQ+CQAEYFRQLLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT

AT5G64341.1 conserved peptide upstream open reading frame 401.2e-1667.92Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT
        MVCQ+  +TRFR LK+E G A + TI+VRVI C+QP+ NCQAEYFR LLKPVT
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGCCAAGCAGCGAGCCAAACACGATTTCGGGCTTTGAAACATGAAAATGGGATTGCAGGAAAGCCAACAATTATAGTCCGAGTGATTGCATGTTTTCAACCTCT
GCAGAATTGCCAGGCCGAGTACTTTCGTCAATTGCTTAAACCTGTCACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGCCAAGCAGCGAGCCAAACACGATTTCGGGCTTTGAAACATGAAAATGGGATTGCAGGAAAGCCAACAATTATAGTCCGAGTGATTGCATGTTTTCAACCTCT
GCAGAATTGCCAGGCCGAGTACTTTCGTCAATTGCTTAAACCTGTCACGTAG
Protein sequenceShow/hide protein sequence
MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT