CuGenDBv2

Gene ID	Sed0014872
Organism	Sechium edule (Chayote v1)
Description	High mobility group B protein
Genome location	LG14:6452050..6456826
RNA-Seq Expression	Sed0014872
Synteny	Sed0014872
Gene Ontology terms	GO:0006333 - chromatin assembly or disassembly (biological process) GO:0000785 - chromatin (cellular component) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003682 - chromatin binding (molecular function) GO:0030527 - structural constituent of chromatin (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031875.1 high mobility group B protein 1 [Cucumis melo var. makuwa]

1.4e-60

91.45

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGKGTSRV+K ALKPVDDRKVGKR A VKADK  KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKE+KRENPNVKAVSAVGKAGGEKWKSLS A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEE
        EK+PYEAKAAKRK EYEKLM+AYD+KKASAA DEESERSKSEVNDEDEASEE
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEE

XP_008449957.1 PREDICTED: high mobility group B protein 1 [Cucumis melo]

3.1e-60

87.65

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGKGTSRV+K ALKPVDDRKVGKR A VKADK  KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKE+KRENPNVKAVSAVGKAGGEKWKSLS A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEE-EDDDDAEEDEDEEDDD
        EK+PYEAKAAKRK EYEKLM+AYD+KKASAA DEESERSKSEVNDEDEASEEE +++DD E++ED+EDDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEE-EDDDDAEEDEDEEDDD

XP_011653690.1 high mobility group B protein 1 [Cucumis sativus]

5.6e-62

89.35

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGKGTSRV+K ALKPVDDRKVGKR A VKADK IKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKE+KRENPNVKAVSAVGKAGGEKWKSLS A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEEEDDDDAEEDEDEEDDD
        EK+PYEAKAAKRK EYEKLM+AYD+KKASAA DEESERSKSEVNDEDEASEEE  +DD EEDED+E+DD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEEEDDDDAEEDEDEEDDD

XP_022151579.1 high mobility group B protein 1 [Momordica charantia]

1.3e-58

87.13

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGKGTSRV+K ALKPVDDRKVGKR AA+KADK  KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKR+NP+VKAVSAVGKAGGEKWKSLS A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEE--EDDDDAEE-DEDEEDDD
        EK+PYEAKAAK+K EYEKLM+AYD+KKAS  DEESERSKSEVNDEDEASEEE  +DDDDAEE DED+ED+D
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEE--EDDDDAEE-DEDEEDDD

XP_038883904.1 high mobility group B protein 1 [Benincasa hispida]

1.0e-60

87.65

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGKGTSRV+K ALKPVDDRKVGKR AAVKADK + RPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKE+KRENPNVKAVSAVGKAGGEKWKSLS A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEE-EDDDDAEEDEDEEDDD
        EK+PYEA+AAKRK EYEKLMKAYD+KKASAA DEESERSKSEVNDEDEASEEE ++DDD ++DEDE++DD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEE-EDDDDAEEDEDEEDDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L1B2 HMG box domain-containing protein

2.7e-62

89.35

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGKGTSRV+K ALKPVDDRKVGKR A VKADK IKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKE+KRENPNVKAVSAVGKAGGEKWKSLS A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEEEDDDDAEEDEDEEDDD
        EK+PYEAKAAKRK EYEKLM+AYD+KKASAA DEESERSKSEVNDEDEASEEE  +DD EEDED+E+DD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEEEDDDDAEEDEDEEDDD

A0A1S3BML2 high mobility group B protein 1

1.5e-60

87.65

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGKGTSRV+K ALKPVDDRKVGKR A VKADK  KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKE+KRENPNVKAVSAVGKAGGEKWKSLS A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEE-EDDDDAEEDEDEEDDD
        EK+PYEAKAAKRK EYEKLM+AYD+KKASAA DEESERSKSEVNDEDEASEEE +++DD E++ED+EDDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEEE-EDDDDAEEDEDEEDDD

A0A5A7SRU9 High mobility group B protein 1

6.6e-61

91.45

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGKGTSRV+K ALKPVDDRKVGKR A VKADK  KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKE+KRENPNVKAVSAVGKAGGEKWKSLS A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEE
        EK+PYEAKAAKRK EYEKLM+AYD+KKASAA DEESERSKSEVNDEDEASEE
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA-DEESERSKSEVNDEDEASEE

A0A6J1DBK9 high mobility group B protein 1

6.2e-59

87.13

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGKGTSRV+K ALKPVDDRKVGKR AA+KADK  KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKR+NP+VKAVSAVGKAGGEKWKSLS A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEE--EDDDDAEE-DEDEEDDD
        EK+PYEAKAAK+K EYEKLM+AYD+KKAS  DEESERSKSEVNDEDEASEEE  +DDDDAEE DED+ED+D
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEE--EDDDDAEE-DEDEEDDD

A0A6J1HS33 high mobility group B protein 1-like

2.4e-58

84.02

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKGSKGK TS+V+K ALKPVDDRKVGKR AAVKADK IKRPTKKDLKAKKDPNKPKRP SAFFVFLE+FRKE+KRENPNVK+VSAVGKAGG+KWKSLS++
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEE-EDDDDAEEDEDEEDDD
        E++PYEAKAAKRK EYEKLMKAYD K ++A DEESERSKSEVNDEDEASEEE EDDD+ EED+D+E+DD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEE-EDDDDAEEDEDEEDDD

SwissProt top hits

e value

%identity

Alignment

O49595 High mobility group B protein 1

6.0e-43

67.05

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MK +KGK   + TK ALKPVDDRKVGKR A   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  FK+ENPNVKAVSAVGKAGG+KWKS+S+A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEEE--------DDDDAEEDEDEEDDD
        EK+PYE KAAKRK EYEK M AY NK      +ESE+S+SE+NDEDEAS EEE        DD++ EE+ED++DDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEEE--------DDDDAEEDEDEEDDD

O49596 High mobility group B protein 2

6.0e-27

53.42

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKG+K K  +R +K ++     +  G+  AA                  KDPNKPKRP SAFFVF+E+FR+ FK+ENP  K+V+ VGKA G+KWKSLS +
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNK--KASAADEESERSKSEVNDEDEA---SEEEEDDD
        EK+PY AKA KRKVEYEK +KAY+ K  +    DEES++S SEVNDED+A   SEEEEDDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNK--KASAADEESERSKSEVNDEDEA---SEEEEDDD

P26585 HMG1/2-like protein

2.9e-29

58.9

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKG K K  S+   P L       V K+ AA KA    ++P  K  KA KDPNKPKRPPSAFFVF+EEFRK F +E+P  KAVSAVGKA G KWK++S A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA----DEESERSKSEVNDED---EASEEEEDDD
        EK+PY AK+ KRKVEYEK M+AY+ K+A       +EESE+S SEVNDED   E S EEEDDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAA----DEESERSKSEVNDED---EASEEEEDDD

P40620 HMG1/2-like protein

2.3e-26

54.43

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKG K KG S+  +  L       V K+ AA  A K  K+P K   K  KDPNKPKRPPSAFFVF+ +FR+++K+++PN K+V+AVGKA GE+WKSLS+ 
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEE-SERSKSEVNDEDEASEEEEDDDD
        EK+PY  +A K+K EYE  ++AY+ K     DEE S++SKSEVNDEDE  E+EED+DD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEE-SERSKSEVNDEDEASEEEEDDDD

P93047 High mobility group B protein 3

3.2e-28

55.9

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKG+K K  +R TK ++                     K+P K    A KDPNKPKRP SAFFVF+E+FR  +K E+P  K+V+AVGKAGGEKWKSLS +
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNK--KASAADEESERSKSEVNDEDEA---SEEEEDDD
        EK+PY AKA KRKVEYEK MKAY+ K  +    DEES++S SEVNDED+A   SEEEEDDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNK--KASAADEESERSKSEVNDEDEA---SEEEEDDD

Arabidopsis top hits

e value

%identity

Alignment

AT1G20696.1 high mobility group B3

2.3e-29

55.9

Show/hide

Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MKG+K K  +R TK ++                     K+P K    A KDPNKPKRP SAFFVF+E+FR  +K E+P  K+V+AVGKAGGEKWKSLS +
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNK--KASAADEESERSKSEVNDEDEA---SEEEEDDD
        EK+PY AKA KRKVEYEK MKAY+ K  +    DEES++S SEVNDED+A   SEEEEDDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNK--KASAADEESERSKSEVNDEDEA---SEEEEDDD

AT3G51880.1 high mobility group B1

4.3e-44

67.05

Show/hide

Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MK +KGK   + TK ALKPVDDRKVGKR A   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  FK+ENPNVKAVSAVGKAGG+KWKS+S+A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEEE--------DDDDAEEDEDEEDDD
        EK+PYE KAAKRK EYEK M AY NK      +ESE+S+SE+NDEDEAS EEE        DD++ EE+ED++DDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEEE--------DDDDAEEDEDEEDDD

AT3G51880.2 high mobility group B1

3.1e-42

64.64

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MK +KGK   + TK ALKPVDDRKVGKR A   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  FK+ENPNVKAVSAVGKAGG+KWKS+S+A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEAS-------------EEEEDDDDAEEDEDEEDDD
        EK+PYE KAAKRK EYEK M AY NK      +ESE+S+SE+NDEDEAS             E+E   DD EE+E+E+DDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEAS-------------EEEEDDDDAEEDEDEEDDD

AT3G51880.3 high mobility group B1

4.3e-44

67.05

Show/hide

Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MK +KGK   + TK ALKPVDDRKVGKR A   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  FK+ENPNVKAVSAVGKAGG+KWKS+S+A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEEE--------DDDDAEEDEDEEDDD
        EK+PYE KAAKRK EYEK M AY NK      +ESE+S+SE+NDEDEAS EEE        DD++ EE+ED++DDD
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEEE--------DDDDAEEDEDEEDDD

AT3G51880.4 high mobility group B1

2.3e-45

70.66

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Query:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA
        MK +KGK   + TK ALKPVDDRKVGKR A   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  FK+ENPNVKAVSAVGKAGG+KWKS+S+A
Subjt:  MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKA

Query:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEEEDDDDAEEDEDEEDD
        EK+PYE KAAKRK EYEK M AY NK      +ESE+S+SE+NDEDEAS EEEDDDD   D+DEE+D
Subjt:  EKSPYEAKAAKRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEEEDDDDAEEDEDEEDD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAAGGATCCAAGGGCAAGGGAACGTCAAGGGTCACCAAACCAGCTTTGAAACCAGTGGATGATAGAAAGGTTGGAAAGCGAACGGCTGCTGTCAAAGCTGACAAGGC
TATCAAACGACCAACAAAGAAAGATTTGAAGGCCAAGAAAGATCCCAACAAACCTAAGAGGCCTCCGAGTGCTTTCTTTGTTTTCTTAGAGGAGTTCAGAAAGGAGTTCA
AAAGGGAAAATCCTAATGTGAAGGCAGTGTCTGCAGTTGGAAAAGCTGGAGGAGAGAAATGGAAATCCTTGAGTAAAGCTGAAAAATCACCCTATGAAGCAAAGGCAGCT
AAAAGGAAGGTTGAATATGAAAAGCTTATGAAGGCATATGACAACAAAAAGGCTAGCGCAGCCGATGAAGAATCGGAGAGGTCGAAATCTGAAGTGAACGACGAGGATGA
GGCCAGTGAGGAGGAGGAAGACGACGATGATGCTGAGGAAGATGAAGATGAAGAAGACGATGATTAA

mRNA sequence

Show/hide mRNA sequence

CGGCCATAATCATTTCCACAAAACGCAAAAGAAAAGATAATTCCTTTGCGTTCATATATTCCTCTTTCCATCCCATTTATTCATTTGTAATTAAAGAAAAAAAAAACTAA
AATATCTGTCACTGGCTATAGCCGGTAAGAAGTAACGGCAATAGTCGCAATGGTTAACGGTAGTTCCGGTTGCTCTAATCACTTTACGGGTTCGAATTCAACCCTGGTTC
TTCTTAACTGTTCTTCTCTGTCTTTGAAAATTCTTTGGTATTGATTCTCTGTTTTCTTTCCGATTTCTTTTGGATCGGACGGATTTTTTCTTCGGAGCAGGTATTTGCCT
TGCATAATGAAAGGATCCAAGGGCAAGGGAACGTCAAGGGTCACCAAACCAGCTTTGAAACCAGTGGATGATAGAAAGGTTGGAAAGCGAACGGCTGCTGTCAAAGCTGA
CAAGGCTATCAAACGACCAACAAAGAAAGATTTGAAGGCCAAGAAAGATCCCAACAAACCTAAGAGGCCTCCGAGTGCTTTCTTTGTTTTCTTAGAGGAGTTCAGAAAGG
AGTTCAAAAGGGAAAATCCTAATGTGAAGGCAGTGTCTGCAGTTGGAAAAGCTGGAGGAGAGAAATGGAAATCCTTGAGTAAAGCTGAAAAATCACCCTATGAAGCAAAG
GCAGCTAAAAGGAAGGTTGAATATGAAAAGCTTATGAAGGCATATGACAACAAAAAGGCTAGCGCAGCCGATGAAGAATCGGAGAGGTCGAAATCTGAAGTGAACGACGA
GGATGAGGCCAGTGAGGAGGAGGAAGACGACGATGATGCTGAGGAAGATGAAGATGAAGAAGACGATGATTAAATTGAAAGCAACTTTGTGAAACTCACAATGGCCGACC
CAGATGAAGGGAGGGGGATTAGCTCATGTACGTTTATATCTTTAGAACTTGCGTGCTTTCTGTTCTTTTGTATTTGTGTGCAACGTGAGAAGTGTCCTCTATGGCGGCAC
TTCGGCGCTATCTTCTCTTTTGTCATATACATTGTTAAAATCTCTGGGTATTGATTCTGGCCATTTCATAACTTAGATAAAATTATCAATTATCATCTCCTAAAAGCTGT
AAATTCAAGTTTGCTTTTAGTCACTTGCCTTTTTGCAGTTCAAAGAAAC

Protein sequence

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MKGSKGKGTSRVTKPALKPVDDRKVGKRTAAVKADKAIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRENPNVKAVSAVGKAGGEKWKSLSKAEKSPYEAKAA
KRKVEYEKLMKAYDNKKASAADEESERSKSEVNDEDEASEEEEDDDDAEEDEDEEDDD

Sed0014872 (gene) of Chayote v1 genome