; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014875 (gene) of Chayote v1 genome

Gene IDSed0014875
OrganismSechium edule (Chayote v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationLG06:32914198..32924258
RNA-Seq ExpressionSed0014875
SyntenySed0014875
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039579.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.2e-0423.5Show/hide
Query:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI
        M L  V  +F   W E   Y +Y+   + +   ++  +  + I   L       ++ + LY       K   + +D+DV  I      S + D  +L V+
Subjt:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI

Query:  EPI----------------QTELYRSNT----------PASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGWKVLSTTL
        + +                +TE  R+ T          P +++ I+VG  F  K  +KKA+  LAL+ SF+  T   N+  + IRC    C W + ++ L
Subjt:  EPI----------------QTELYRSNT----------PASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGWKVLSTTL

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.1e-0524Show/hide
Query:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI
        M L  V  +F D W E   Y +Y+   + +   ++  +  + I   L       ++ + LY       K   +++D+DV  I      S + D  +L V+
Subjt:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI

Query:  --------------------------EPIQTELYRSNTPASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGWKVLSTTL
                                  E I  +L    +P +L+ I+VG  F  K  +KKA+  LAL+ SF+  T + N+  + IRC    C W + +  L
Subjt:  --------------------------EPIQTELYRSNTPASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGWKVLSTTL

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]2.7e-0422.28Show/hide
Query:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI
        M L  V  +F   W E   Y +Y+   + +   ++  + ++ I   L       +  + LY       K   +++D+DV  I      S   D  +L V+
Subjt:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI

Query:  EP--------------------------IQTELYRSNTPASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW
        +                           +  +L    +P +++ I+VG  F  K  +KKA+  LAL+ SF+  T + N+  + IRC   +C W
Subjt:  EP--------------------------IQTELYRSNTPASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]2.4e-0525.7Show/hide
Query:  WDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYT------SMYTDC--CILAVIE--PI
        W++RD Y  YK + + +    +  +L+  I   L    SS    IF      +  K   + +D+DVH ++N  +       S+  DC  C+  V++  PI
Subjt:  WDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYT------SMYTDC--CILAVIE--PI

Query:  QTELYRSNTPASL---------------VVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW
         T     N   S+                 I+V   F  K  ++ AL ++A+  +FQFRT K N+    +R   + C W
Subjt:  QTELYRSNTPASL---------------VVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW

XP_038887125.1 uncharacterized protein LOC120077310 [Benincasa hispida]1.4e-0823.35Show/hide
Query:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCIL---
        M L  V ++F+  WDE   Y +++     +   ++  Q ++ I   L       ++ + +Y  G       +++ED+ +  +      S   D C++   
Subjt:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCIL---

Query:  --AVIEPIQTELYRSNTPASL-------------------------VVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW
          +V +  Q  LY +N   ++                         + I+VGL F+SK  +KKA+  LAL  SF+  T + NK  ++I C   +CGW
Subjt:  --AVIEPIQTELYRSNTPASL-------------------------VVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW

TrEMBL top hitse value%identityAlignment
A0A5A7TEC9 Protein FAR1-RELATED SEQUENCE 2-like5.8e-0523.5Show/hide
Query:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI
        M L  V  +F   W E   Y +Y+   + +   ++  +  + I   L       ++ + LY       K   + +D+DV  I      S + D  +L V+
Subjt:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI

Query:  EPI----------------QTELYRSNT----------PASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGWKVLSTTL
        + +                +TE  R+ T          P +++ I+VG  F  K  +KKA+  LAL+ SF+  T   N+  + IRC    C W + ++ L
Subjt:  EPI----------------QTELYRSNT----------PASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGWKVLSTTL

A0A5A7VAU3 MuDRA-like transposase5.2e-0624Show/hide
Query:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI
        M L  V  +F D W E   Y +Y+   + +   ++  +  + I   L       ++ + LY       K   +++D+DV  I      S + D  +L V+
Subjt:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI

Query:  --------------------------EPIQTELYRSNTPASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGWKVLSTTL
                                  E I  +L    +P +L+ I+VG  F  K  +KKA+  LAL+ SF+  T + N+  + IRC    C W + +  L
Subjt:  --------------------------EPIQTELYRSNTPASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGWKVLSTTL

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like1.3e-0422.28Show/hide
Query:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI
        M L  V  +F   W E   Y +Y+   + +   ++  + ++ I   L       +  + LY       K   +++D+DV  I      S   D  +L V+
Subjt:  MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVI

Query:  EP--------------------------IQTELYRSNTPASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW
        +                           +  +L    +P +++ I+VG  F  K  +KKA+  LAL+ SF+  T + N+  + IRC   +C W
Subjt:  EP--------------------------IQTELYRSNTPASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW

A0A6J1DNQ8 uncharacterized protein LOC1110223471.2e-0525.7Show/hide
Query:  WDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYT------SMYTDC--CILAVIE--PI
        W++RD Y  YK + + +    +  +L+  I   L    SS    IF      +  K   + +D+DVH ++N  +       S+  DC  C+  V++  PI
Subjt:  WDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYT------SMYTDC--CILAVIE--PI

Query:  QTELYRSNTPASL---------------VVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW
         T     N   S+                 I+V   F  K  ++ AL ++A+  +FQFRT K N+    +R   + C W
Subjt:  QTELYRSNTPASL---------------VVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTACACCAGTCACCATTATTTTTGACGATGTGTGGGATGAAAGGGACATCTATACAAACTACAAGACTGCATCTATTGAACTAGCATACGGGACCACAATTTG
TCAACTTATTGACTTAATTACAAGTTCACTCAACACTGGTGAAAGTTCGAAAATGGCTGGAATTTTCCTCTACAAAGATGGCCCCGAAAAATGCAAATCAACTGCTCTCA
TTGAAGACAGGGATGTGCACATGATATTCAATGGATTCTACACCAGTATGTATACTGATTGTTGCATACTAGCAGTCATTGAACCAATACAGACAGAGTTGTACAGAAGT
AATACCCCTGCTAGCCTAGTTGTCATAAAAGTTGGTCTTACATTTACCAGCAAGGATGAGATGAAGAAAGCACTAGGCAACCTAGCATTGAGCCGGAGTTTTCAGTTCAG
AACCCCAAAGTTGAATAAGAAACAGTACAAAATTCGATGTATTCATGAGACATGTGGCTGGAAGGTGTTGTCAACAACTCTTGTATTTTGGTTTTACAATAATTACGTTT
ACGGGTTTTCGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTACACCAGTCACCATTATTTTTGACGATGTGTGGGATGAAAGGGACATCTATACAAACTACAAGACTGCATCTATTGAACTAGCATACGGGACCACAATTTG
TCAACTTATTGACTTAATTACAAGTTCACTCAACACTGGTGAAAGTTCGAAAATGGCTGGAATTTTCCTCTACAAAGATGGCCCCGAAAAATGCAAATCAACTGCTCTCA
TTGAAGACAGGGATGTGCACATGATATTCAATGGATTCTACACCAGTATGTATACTGATTGTTGCATACTAGCAGTCATTGAACCAATACAGACAGAGTTGTACAGAAGT
AATACCCCTGCTAGCCTAGTTGTCATAAAAGTTGGTCTTACATTTACCAGCAAGGATGAGATGAAGAAAGCACTAGGCAACCTAGCATTGAGCCGGAGTTTTCAGTTCAG
AACCCCAAAGTTGAATAAGAAACAGTACAAAATTCGATGTATTCATGAGACATGTGGCTGGAAGGTGTTGTCAACAACTCTTGTATTTTGGTTTTACAATAATTACGTTT
ACGGGTTTTCGAGTTAG
Protein sequenceShow/hide protein sequence
MELTPVTIIFDDVWDERDIYTNYKTASIELAYGTTICQLIDLITSSLNTGESSKMAGIFLYKDGPEKCKSTALIEDRDVHMIFNGFYTSMYTDCCILAVIEPIQTELYRS
NTPASLVVIKVGLTFTSKDEMKKALGNLALSRSFQFRTPKLNKKQYKIRCIHETCGWKVLSTTLVFWFYNNYVYGFSS