; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014938 (gene) of Chayote v1 genome

Gene IDSed0014938
OrganismSechium edule (Chayote v1)
DescriptionTranslation initiation factor IF-3
Genome locationLG11:4403225..4410643
RNA-Seq ExpressionSed0014938
SyntenySed0014938
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]4.5e-11276.92Show/hide
Query:  MAGVTSS--FNPLLSHSAAAATTSSAA------VSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVF----TSPIRSTVSARFGGAPRFPRPAD
        MAG++ S  F  LLS S+AAATT+S++       SSS+  PFRTS     I  S+SNAFKFR+HKS SLR +F    +SPIR++V AR GGAPR   P D
Subjt:  MAGVTSS--FNPLLSHSAAAATTSSAA------VSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVF----TSPIRSTVSARFGGAPRFPRPAD

Query:  SKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNI
        SKRS+D++ LD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAE+AELDLVV+SPDADPPVV+IMDYNKYRYE+QKKKR QQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV
        DQHDYSVRLKAAKKFLKDGD+VKVIVNLKGRENEFRN+AIE+IRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQ+PPKK+DKP VN VSASV
Subjt:  DQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]1.2e-11279.12Show/hide
Query:  MAGVTSS--FNPLLSHSAAAATTSS---AAVSSSAAIPFRTSISPFHIPFS-DSNAFKFRIHKSKSLRFVF----TSPIRSTVSARFGGAPRFPRPADSK
        MAG++ S  F  LLS S+AA+TT+S   A  SSS+  PFRTS     I  S +SNAFK R+HKS SLR VF    +SPIR++V AR GGAPR   P DSK
Subjt:  MAGVTSS--FNPLLSHSAAAATTSS---AAVSSSAAIPFRTSISPFHIPFS-DSNAFKFRIHKSKSLRFVF----TSPIRSTVSARFGGAPRFPRPADSK

Query:  RSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQ
        RS+D+  LDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAE+AELDLVVLSPDADPPVV+IMDYNKYRYE+QKKKR QQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV
        HDYSVRLKAAKKFLKDGD+VKVIVNLKGRENEFRN+AIE+IRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQ+PPKK+DKP VNEVSA V
Subjt:  HDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]1.6e-11781.91Show/hide
Query:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSS----AAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDD
        MAG+TS   F PLLS S  +ATTSSAA SSS    AA PFRTSISP  +  S+SNAF FR+H S SLR + +SPIR +V ARFGGAPR   PADSKRSDD
Subjt:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSS----AAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDD

Query:  DLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYS
        D  LDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAE+AELDLVVLSPDADPPVV+IMDYNKYRYE+QKKKR QQKKSAATRMDLKELKMGYNIDQHDYS
Subjt:  DLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYS

Query:  VRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV
        VRLKAA++FLKDGD+VKVIVNLKGRENEFRN+AIE+IRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQ+PPKK+D P +NEVSA V
Subjt:  VRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV

XP_023536766.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.0e-10877.24Show/hide
Query:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSSA-AIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDDDLS
        MAG+T    F PLLSHS+A  TTS++A SSSA A P RTS+SP  +  S SNAF+FR+H S SL  VFT+  RSTV A++GG  R   PADSKR DD L 
Subjt:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSSA-AIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDDDLS

Query:  LDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRL
        +D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA++AELDLVVLSPDADPPVV+IMDY+KYRYE QKKKR QQKKSAATRMDLKELKMGYNIDQHDYSVRL
Subjt:  LDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRL

Query:  KAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV
        KAA+KFLKDGD+VKVIVNLKGREN F+N+AIE+IRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQ+PPK +D   VNEVSASV
Subjt:  KAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]8.2e-11480Show/hide
Query:  MAGVTS--SFNPLLSHSAAAATTS-SAAVSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLR----FVFTSPIRSTVSARFGGAPRFPRPADSKRSD
        MAG++    F PLLS S  A TTS +AA SSS+A PFRTSI P  +  S +NAFKFR+ KS SLR    F  +SPIR++V +R+GGAPR   PADSKRSD
Subjt:  MAGVTS--SFNPLLSHSAAAATTS-SAAVSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLR----FVFTSPIRSTVSARFGGAPRFPRPADSKRSD

Query:  DDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDY
        D+  LDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAE+AELDLVVLSPDADPPVV+IMDYNKYRYE+QKKKR QQKKSAATRMDLKELKMGYNIDQHDY
Subjt:  DDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQD-PPKKRDKPEVNEVSASV
        SVRL+AA+KFLKDGD+VKVIVNLKGRENEFRN+AIE+IRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQ+ PPKK+DKP VNEVSA V
Subjt:  SVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQD-PPKKRDKPEVNEVSASV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-32.2e-11276.92Show/hide
Query:  MAGVTSS--FNPLLSHSAAAATTSSAA------VSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVF----TSPIRSTVSARFGGAPRFPRPAD
        MAG++ S  F  LLS S+AAATT+S++       SSS+  PFRTS     I  S+SNAFKFR+HKS SLR +F    +SPIR++V AR GGAPR   P D
Subjt:  MAGVTSS--FNPLLSHSAAAATTSSAA------VSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVF----TSPIRSTVSARFGGAPRFPRPAD

Query:  SKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNI
        SKRS+D++ LD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAE+AELDLVV+SPDADPPVV+IMDYNKYRYE+QKKKR QQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV
        DQHDYSVRLKAAKKFLKDGD+VKVIVNLKGRENEFRN+AIE+IRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQ+PPKK+DKP VN VSASV
Subjt:  DQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV

A0A1S3BV82 Translation initiation factor IF-35.7e-11379.12Show/hide
Query:  MAGVTSS--FNPLLSHSAAAATTSS---AAVSSSAAIPFRTSISPFHIPFS-DSNAFKFRIHKSKSLRFVF----TSPIRSTVSARFGGAPRFPRPADSK
        MAG++ S  F  LLS S+AA+TT+S   A  SSS+  PFRTS     I  S +SNAFK R+HKS SLR VF    +SPIR++V AR GGAPR   P DSK
Subjt:  MAGVTSS--FNPLLSHSAAAATTSS---AAVSSSAAIPFRTSISPFHIPFS-DSNAFKFRIHKSKSLRFVF----TSPIRSTVSARFGGAPRFPRPADSK

Query:  RSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQ
        RS+D+  LDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAE+AELDLVVLSPDADPPVV+IMDYNKYRYE+QKKKR QQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV
        HDYSVRLKAAKKFLKDGD+VKVIVNLKGRENEFRN+AIE+IRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQ+PPKK+DKP VNEVSA V
Subjt:  HDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV

A0A6J1DYM5 Translation initiation factor IF-37.7e-11881.91Show/hide
Query:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSS----AAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDD
        MAG+TS   F PLLS S  +ATTSSAA SSS    AA PFRTSISP  +  S+SNAF FR+H S SLR + +SPIR +V ARFGGAPR   PADSKRSDD
Subjt:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSS----AAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDD

Query:  DLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYS
        D  LDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAE+AELDLVVLSPDADPPVV+IMDYNKYRYE+QKKKR QQKKSAATRMDLKELKMGYNIDQHDYS
Subjt:  DLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYS

Query:  VRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV
        VRLKAA++FLKDGD+VKVIVNLKGRENEFRN+AIE+IRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQ+PPKK+D P +NEVSA V
Subjt:  VRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV

A0A6J1FCR3 Translation initiation factor IF-33.3e-10877.32Show/hide
Query:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSSA-AIPFRTSISPFHIPFSD-SNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDDDL
        MAG+T+   F PLLSHS+A+ TTS+AA SSSA A P RTSISP  +  S  SNAF+FR+H S SL  +FT+  RSTV A++GG  R   PADSKR DD L
Subjt:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSSA-AIPFRTSISPFHIPFSD-SNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDDDL

Query:  SLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVR
         +D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA++AELDLVVLSPDADPPVV+IMDY+KYRYE QKKKR QQKKSAATRMDLKELKMGYNIDQHDYSVR
Subjt:  SLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVR

Query:  LKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV
        LKAA+KFLKDGD+VKVIVNLKGREN F+N+AIE+IRRFQEEIGELATEEAKN RDRN+FIVL PNKAVLQKAQ+PPK +D   VNEVSASV
Subjt:  LKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV

A0A6J1G3Y5 Translation initiation factor IF-34.2e-10875.17Show/hide
Query:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDDDLSL
        MAG++    F  + S S+A AT ++   SSS+A PFRTSI P  +P S SNAF+FR+H S SLR V +SPIR++V AR+GGAPR   PA SKRS+D L+L
Subjt:  MAGVTS--SFNPLLSHSAAAATTSSAAVSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDDDLSL

Query:  DVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLK
        DVS+IRSNNVRLID QQNMVGIV K+QAIQMAE+AELDLVVLSPDADPPVV+IMDY+KYRY++QKKKREQQKKSAATRMDLKELKMGY IDQHDYSVRL+
Subjt:  DVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLK

Query:  AAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKP-EVNEVSASV
        AAKKFL+DGD+VKVIVNLKGRENEFR +AIE+++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+Q+PPKK+DKP  VNEVSA V
Subjt:  AAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKP-EVNEVSASV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-38.1e-3242.61Show/hide
Query:  DSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYN
        D +R+  DL      IR   +R+ID+  + +GI++ A+A+++AEE ELDLV++S  A PPV +IMDY KY++E +KK RE +KK      D+KE+KM Y 
Subjt:  DSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A++FLK GD+VK  +  +GRE +  NLA E++ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic1.7e-7459.71Show/hide
Query:  ATTSSAAVSSSAAIPFRTSISPFHIPFS-DSNAFKFRIHKSK-SLRFVFTSPIRS-TVSARFGGAP---RFP---RPADSKRSDDDLSLDVSAIRSNNVR
        A  +S+ V  +A     T     H  FS DS     R+ K++ S   +  SP R+  V+ RFGG     RF    R    K ++ D +LD+S+IRS  VR
Subjt:  ATTSSAAVSSSAAIPFRTSISPFHIPFS-DSNAFKFRIHKSK-SLRFVFTSPIRS-TVSARFGGAP---RFP---RPADSKRSDDDLSLDVSAIRSNNVR

Query:  LIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDR
        LID QQNM+G+VSK +A++MA++AELDLV+LSPDADPPVVK+MDY+KYRYE QK+K++QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGD+
Subjt:  LIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDR

Query:  VKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPP-KKRDKPEVNEVSAS
        VKVIV++KGRENEFRN+AIE++RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K Q+PP +K+ K   NE SAS
Subjt:  VKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPP-KKRDKPEVNEVSAS

Q8R9C2 Translation initiation factor IF-33.1e-3144.72Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK
        IR   VRLID     +GI+S  +A ++A+E  LDLV + P+A+PPV K+MD+ KYRYE+ K+++E +KK     +++KE++M  NI+ HD+ V+LK+A K
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK

Query:  FLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK
        FLKDGD+VKV +  +GRE    +LA ++++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  FLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELA-TEEAKNFRDRNIFIVLVPNK

Q8YNE3 Translation initiation factor IF-36.9e-3143.33Show/hide
Query:  PADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMG
        P   K+   DL      IR   +R+ID   + +GI++  +A+Q+AEE ELDLV+LS  ADPPV +IMDY KY++E +KK RE +KK      D+KE+KM 
Subjt:  PADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMG

Query:  YNIDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK
        Y I++HDY+VR+K A++FLKDGD+VK  V  +GRE +  +LA ++++R     E  GE+  ++A     RN+ +++ P K
Subjt:  YNIDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQ---EEIGELATEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic3.4e-7872.17Show/hide
Query:  GGAPRFP--RPADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAAT
        GG  RFP  R    K S+DD SLD+SAIRS  VRLID QQNM+G+VSK +A++ AE+AELDLV+LSPDADPPVV++MDY+KYRYE QK+K+EQQKK+  T
Subjt:  GGAPRFP--RPADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAAT

Query:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQD-PPKK
        RMDLKELKMGYNIDQHDYSVR++AA+KFL+DGD+VKVIVN+KGRENEFRN+AIE++RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K Q+ PPKK
Subjt:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQD-PPKK

Query:  RDKPEVNEVSAS
        + KP  ++VSA+
Subjt:  RDKPEVNEVSAS

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein1.7e-0828.68Show/hide
Query:  TSSAAVSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGI
        T     SS+  +   T +S F IP SD                + T P     + RF       R  +++   D   L+   I  + VRL+  + + V  
Subjt:  TSSAAVSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGI

Query:  VSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQK--KKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDRVKVI-VNLK
        VS  +A++ A+E + DLV +  DA PPV KI+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A K ++ G RVK + V  K
Subjt:  VSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQK--KKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDRVKVI-VNLK

Query:  GRENEFR-NLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKK
         +  E      +E++ RF   IG+ A  E+    DR   +V+V +         PPKK
Subjt:  GRENEFR-NLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKK

AT2G24060.1 Translation initiation factor 3 protein1.2e-7559.71Show/hide
Query:  ATTSSAAVSSSAAIPFRTSISPFHIPFS-DSNAFKFRIHKSK-SLRFVFTSPIRS-TVSARFGGAP---RFP---RPADSKRSDDDLSLDVSAIRSNNVR
        A  +S+ V  +A     T     H  FS DS     R+ K++ S   +  SP R+  V+ RFGG     RF    R    K ++ D +LD+S+IRS  VR
Subjt:  ATTSSAAVSSSAAIPFRTSISPFHIPFS-DSNAFKFRIHKSK-SLRFVFTSPIRS-TVSARFGGAP---RFP---RPADSKRSDDDLSLDVSAIRSNNVR

Query:  LIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDR
        LID QQNM+G+VSK +A++MA++AELDLV+LSPDADPPVVK+MDY+KYRYE QK+K++QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGD+
Subjt:  LIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDR

Query:  VKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPP-KKRDKPEVNEVSAS
        VKVIV++KGRENEFRN+AIE++RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K Q+PP +K+ K   NE SAS
Subjt:  VKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPP-KKRDKPEVNEVSAS

AT4G30690.1 Translation initiation factor 3 protein2.4e-7972.17Show/hide
Query:  GGAPRFP--RPADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAAT
        GG  RFP  R    K S+DD SLD+SAIRS  VRLID QQNM+G+VSK +A++ AE+AELDLV+LSPDADPPVV++MDY+KYRYE QK+K+EQQKK+  T
Subjt:  GGAPRFP--RPADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAAT

Query:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQD-PPKK
        RMDLKELKMGYNIDQHDYSVR++AA+KFL+DGD+VKVIVN+KGRENEFRN+AIE++RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K Q+ PPKK
Subjt:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQD-PPKK

Query:  RDKPEVNEVSAS
        + KP  ++VSA+
Subjt:  RDKPEVNEVSAS

AT4G30690.2 Translation initiation factor 3 protein7.0e-6360.85Show/hide
Query:  GGAPRFP--RPADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAAT
        GG  RFP  R    K S+DD SLD+SAIRS  VRLID QQNM+G+VSK +A++ AE+AELDLV+LSPDADPPVV++MDY+                    
Subjt:  GGAPRFP--RPADSKRSDDDLSLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAAT

Query:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQD-PPKK
                  YNIDQHDYSVR++AA+KFL+DGD+VKVIVN+KGRENEFRN+AIE++RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K Q+ PPKK
Subjt:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRENEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQD-PPKK

Query:  RDKPEVNEVSAS
        + KP  ++VSA+
Subjt:  RDKPEVNEVSAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGGTCACCAGTAGTTTCAACCCTCTCTTATCTCATTCCGCCGCCGCCGCTACCACCTCTTCCGCCGCCGTCTCCTCCTCCGCCGCCATCCCCTTCCGGACATC
AATTTCCCCTTTCCACATCCCTTTCTCTGATTCCAACGCATTCAAATTCCGCATTCACAAGTCCAAATCTCTGCGTTTCGTCTTCACTTCTCCAATTCGCAGTACTGTAT
CTGCTCGATTCGGCGGCGCTCCTCGATTTCCACGGCCGGCGGATTCCAAGCGCTCCGACGATGATCTCAGCCTCGATGTTTCCGCCATCAGGTCGAATAATGTGAGGCTT
ATCGATGCACAACAAAACATGGTTGGAATTGTGTCGAAGGCACAGGCCATTCAAATGGCTGAAGAAGCTGAACTTGATTTGGTTGTATTATCACCCGATGCCGATCCGCC
GGTCGTCAAAATAATGGATTACAATAAATATAGGTATGAAGTGCAAAAGAAGAAAAGAGAACAGCAGAAGAAAAGTGCTGCTACTCGCATGGATTTGAAAGAGCTTAAAA
TGGGTTACAACATTGACCAACATGATTACTCTGTTCGTTTAAAAGCTGCAAAGAAGTTCTTGAAAGATGGAGACAGGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAG
AATGAGTTCAGGAACTTAGCGATCGAGATCATCAGACGTTTCCAGGAAGAGATTGGAGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATATATTTATTGT
TTTAGTTCCTAACAAAGCTGTTCTACAGAAGGCTCAAGATCCCCCCAAGAAAAGAGACAAGCCTGAAGTTAATGAAGTTTCTGCCAGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
TAAAAAAAAAAAAAAGGGCCAAAACTCCCACCCTCCACTGCCCCATTCCACAGCTCAAAGCTATGGCTGGGGTCACCAGTAGTTTCAACCCTCTCTTATCTCATTCCGCC
GCCGCCGCTACCACCTCTTCCGCCGCCGTCTCCTCCTCCGCCGCCATCCCCTTCCGGACATCAATTTCCCCTTTCCACATCCCTTTCTCTGATTCCAACGCATTCAAATT
CCGCATTCACAAGTCCAAATCTCTGCGTTTCGTCTTCACTTCTCCAATTCGCAGTACTGTATCTGCTCGATTCGGCGGCGCTCCTCGATTTCCACGGCCGGCGGATTCCA
AGCGCTCCGACGATGATCTCAGCCTCGATGTTTCCGCCATCAGGTCGAATAATGTGAGGCTTATCGATGCACAACAAAACATGGTTGGAATTGTGTCGAAGGCACAGGCC
ATTCAAATGGCTGAAGAAGCTGAACTTGATTTGGTTGTATTATCACCCGATGCCGATCCGCCGGTCGTCAAAATAATGGATTACAATAAATATAGGTATGAAGTGCAAAA
GAAGAAAAGAGAACAGCAGAAGAAAAGTGCTGCTACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTACAACATTGACCAACATGATTACTCTGTTCGTTTAAAAGCTG
CAAAGAAGTTCTTGAAAGATGGAGACAGGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAGAATGAGTTCAGGAACTTAGCGATCGAGATCATCAGACGTTTCCAGGAA
GAGATTGGAGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATATATTTATTGTTTTAGTTCCTAACAAAGCTGTTCTACAGAAGGCTCAAGATCCCCCCAA
GAAAAGAGACAAGCCTGAAGTTAATGAAGTTTCTGCCAGTGTTTAAGCTCAATAAGCGTCGAGCTTAAGCGAAAAATAGAACGGTCAGTCGTAACAATCTAAATCTTCTT
CTACCATAGAGAGATTTGAGAGATTAATGTATAATGTTTTTGCTTAATCTATTGTATCATACTCAACTGCTGTTCATTTTTTTTTTAGTGAAATGCTTAGAAATCAGATG
TGTTGTTAGTTCTTTTGTAAAGATAAAATCAAGTAAAATTAGTAGCTGAGCTTAGTTTTTAGTTTA
Protein sequenceShow/hide protein sequence
MAGVTSSFNPLLSHSAAAATTSSAAVSSSAAIPFRTSISPFHIPFSDSNAFKFRIHKSKSLRFVFTSPIRSTVSARFGGAPRFPRPADSKRSDDDLSLDVSAIRSNNVRL
IDAQQNMVGIVSKAQAIQMAEEAELDLVVLSPDADPPVVKIMDYNKYRYEVQKKKREQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDRVKVIVNLKGRE
NEFRNLAIEIIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQDPPKKRDKPEVNEVSASV