; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014944 (gene) of Chayote v1 genome

Gene IDSed0014944
OrganismSechium edule (Chayote v1)
DescriptionNuclear pore complex protein NUP35
Genome locationLG09:39510656..39515198
RNA-Seq ExpressionSed0014944
SyntenySed0014944
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0051028 - mRNA transport (biological process)
GO:0031965 - nuclear membrane (cellular component)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0044615 - nuclear pore nuclear basket (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005543 - phospholipid binding (molecular function)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR007846 - RNA-recognition motif (RRM) Nup35-type domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR017389 - Nucleoporin, NUP53
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051033.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa]2.5e-14379.03Show/hide
Query:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM
        TVHRTPNSG +SLFYQDLASP+TTRKGKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D S SDFSPE GI  YP+SPE KSDPRTPI   DF SSP 
Subjt:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM

Query:  QRKSNTSTSYTP---------RSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
        + KSN STSYTP          +G+S W TSKGG SE+EDKGK SPVEGVIQPGALITLP PRE+AR E+ERNCLP  KLNEEEW+TVYGFSPADTN+VL
Subjt:  QRKSNTSTSYTP---------RSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCGEILKH+ GPRDANWMHI YQNRSDA KALNKNGIQINGV+IVGVKPVDP H Q LDEKLNNPGFM IPPVSSRTSEL+ATRGP RPY+LQN N
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        ++ R + G  IASP+KSLVSK MDLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

XP_004141656.1 nuclear pore complex protein NUP35 [Cucumis sativus]2.1e-14278.72Show/hide
Query:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM
        TVHRTPNSG +SLFYQDLASP+TTRKGKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D S SDFSPE GI  YP+SPE KSDPRTPI   DF SSP 
Subjt:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM

Query:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
        + KSN STSYTP S         G+S W TSKGG SEQEDKGK SPVEGVIQPGALITLP PRE+AR E++RNCLP  KLNEEEW+TVYGFSPADTN+VL
Subjt:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCGEILKH+ GPRDANWMHI YQNRSDA KALNKNGIQINGV+IVGVKPVDP H Q L+E+LNNPGFM IPPVSSRTSEL+ATRGP RPYNLQN  
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        ++ R + G  IASP+KSLVSK MDLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

XP_008462444.1 PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]1.6e-14278.72Show/hide
Query:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM
        TVHRTPNSG +SLFYQDLASP+TTRKGKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D S SDFSPE GI  YP+SPE KSDPRTPI   DF SSP 
Subjt:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM

Query:  QRKSNTSTSYTP---------RSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
        + KSN STSYTP          +G+S W TSKGG SE+EDKGK SPVEGVIQPGALITLP PRE+AR E+ERNCLP  KLNEEEW+TVYGFSPADTN+VL
Subjt:  QRKSNTSTSYTP---------RSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCGEILKH+ GPRDANWMHI YQNRSDA KALNKNGIQINGV+IVGVKPVDP H Q LDEKLNNPGFM IPPVSSRTSEL+ATRGP  PY+LQN N
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        ++ R + G  IASP+KSLVSK MDLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

XP_022151212.1 nuclear pore complex protein NUP35 [Momordica charantia]1.7e-14479.03Show/hide
Query:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM
        T+HRTPNSGRQS+FYQDLASP+T+RKGKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D   SDFSPE GI  YPLSPE+KSDPRTPI+S DF SSPM
Subjt:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM

Query:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
        + KSN STSYTP S         G+S W TSKGG SEQEDKGK SPVEG +QPGALI LP PRE+AR E++RNC PA KLNEEEW+TVYGFSPADTN+VL
Subjt:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCGEILKHV GPRDANWMHI YQNRSDAHKALNKNG+QINGV+IVGVKPVDP H Q LDEK+NNPGFM IPPV SRT+EL+ATRGP R YNLQN N
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        SN RQ+ G  IASP+KSLVSK MDLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

XP_038900103.1 nuclear pore complex protein NUP35 [Benincasa hispida]4.4e-14881.4Show/hide
Query:  VHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPMQ
        VHRTPNSGRQSLFYQDLASP+TTRKGKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D SGSDFSPE GIA YP+SPE+KSDPRTPI+S DF SSP++
Subjt:  VHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPMQ

Query:  RKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLR
         KSN STSYTP S         G+S W TSKGG SEQEDKGK SPVEGVIQPGALITLP PRE+AR E++RNCLPA KLNEEEW+TVYGFSPADTN+VLR
Subjt:  RKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLR

Query:  EFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCNS
        EFEKCGEILKHV GPRDANWMHI YQNRSDAH+ALNKNGIQINGV+IVGVKPVDP H Q LDEKLN+PGFM  PPVSSRTSEL+ATRG  RPYNLQN NS
Subjt:  EFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCNS

Query:  NPRQAEGINIASPTKSLVSKAMDLMFGV
        + RQ+ G  IASP+KSLVSK MDLMFGV
Subjt:  NPRQAEGINIASPTKSLVSKAMDLMFGV

TrEMBL top hitse value%identityAlignment
A0A0A0K7B2 Nuclear pore complex protein NUP351.0e-14278.72Show/hide
Query:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM
        TVHRTPNSG +SLFYQDLASP+TTRKGKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D S SDFSPE GI  YP+SPE KSDPRTPI   DF SSP 
Subjt:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM

Query:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
        + KSN STSYTP S         G+S W TSKGG SEQEDKGK SPVEGVIQPGALITLP PRE+AR E++RNCLP  KLNEEEW+TVYGFSPADTN+VL
Subjt:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCGEILKH+ GPRDANWMHI YQNRSDA KALNKNGIQINGV+IVGVKPVDP H Q L+E+LNNPGFM IPPVSSRTSEL+ATRGP RPYNLQN  
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        ++ R + G  IASP+KSLVSK MDLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

A0A1S3CH09 Nuclear pore complex protein NUP357.8e-14378.72Show/hide
Query:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM
        TVHRTPNSG +SLFYQDLASP+TTRKGKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D S SDFSPE GI  YP+SPE KSDPRTPI   DF SSP 
Subjt:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM

Query:  QRKSNTSTSYTP---------RSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
        + KSN STSYTP          +G+S W TSKGG SE+EDKGK SPVEGVIQPGALITLP PRE+AR E+ERNCLP  KLNEEEW+TVYGFSPADTN+VL
Subjt:  QRKSNTSTSYTP---------RSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCGEILKH+ GPRDANWMHI YQNRSDA KALNKNGIQINGV+IVGVKPVDP H Q LDEKLNNPGFM IPPVSSRTSEL+ATRGP  PY+LQN N
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        ++ R + G  IASP+KSLVSK MDLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

A0A5A7U592 Nuclear pore complex protein NUP351.2e-14379.03Show/hide
Query:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM
        TVHRTPNSG +SLFYQDLASP+TTRKGKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D S SDFSPE GI  YP+SPE KSDPRTPI   DF SSP 
Subjt:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM

Query:  QRKSNTSTSYTP---------RSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
        + KSN STSYTP          +G+S W TSKGG SE+EDKGK SPVEGVIQPGALITLP PRE+AR E+ERNCLP  KLNEEEW+TVYGFSPADTN+VL
Subjt:  QRKSNTSTSYTP---------RSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCGEILKH+ GPRDANWMHI YQNRSDA KALNKNGIQINGV+IVGVKPVDP H Q LDEKLNNPGFM IPPVSSRTSEL+ATRGP RPY+LQN N
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        ++ R + G  IASP+KSLVSK MDLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

A0A6J1DCV4 Nuclear pore complex protein NUP358.3e-14579.03Show/hide
Query:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM
        T+HRTPNSGRQS+FYQDLASP+T+RKGKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D   SDFSPE GI  YPLSPE+KSDPRTPI+S DF SSPM
Subjt:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM

Query:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
        + KSN STSYTP S         G+S W TSKGG SEQEDKGK SPVEG +QPGALI LP PRE+AR E++RNC PA KLNEEEW+TVYGFSPADTN+VL
Subjt:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCGEILKHV GPRDANWMHI YQNRSDAHKALNKNG+QINGV+IVGVKPVDP H Q LDEK+NNPGFM IPPV SRT+EL+ATRGP R YNLQN N
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        SN RQ+ G  IASP+KSLVSK MDLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

A0A6J1GRZ8 Nuclear pore complex protein NUP353.9e-14277.81Show/hide
Query:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM
        TVHRT NSGRQSLFYQDLASP++TR+GKFST GQAAAVSALW+ENFGNSDLPPPPVFTL+D SGSDFSPE GI  YP+SPE+KSDP TPI+S DF SSPM
Subjt:  TVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM

Query:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
        + KSNTSTS+TP S         G+S W T KGG SEQEDKGK SPVEGVIQPGALITL  PRE+AR E++RNCLPA KLNEEEW+TVYGFSPADTN+VL
Subjt:  QRKSNTSTSYTPRS---------GYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCGEILKHV GPRDANWMHI Y+NRS AHKAL+KNGIQING++IVGVKPVDP   QTLDEKLNNPGFM +PPVSSRT+EL    GP RPYN QN N
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        S  RQ+ G  IASP+KSLVSK MDLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

SwissProt top hitse value%identityAlignment
O04326 Nuclear pore complex protein NUP351.3e-10762.01Show/hide
Query:  HRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESR---------
        HRTP SGRQSL +QDLASP++ R+GKFS+ GQAAAVSALW+ENFG SDLPPPP++TLDD   SDFSPE GIA Y  SP+ KSD RTP +S          
Subjt:  HRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESR---------

Query:  -DFSSSPMQRKSNTSTSYTPRSGYSLWLTSKGGSS-EQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
            +SP     N   S       S W  SK GSS EQ+DKGKGSPVEGV+QPGAL+TLP PRE+AR E++R  +P   L+EEEW+TVYGFSP DTN+VL
Subjt:  -DFSSSPMQRKSNTSTSYTPRSGYSLWLTSKGGSS-EQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCG +LKHV GPR+ANWMHI YQNRSDAHKALNK G+ INGV+IVGVKPVDP   Q L+E+LNN GFM +PP SS  +     R  +RP  LQN +
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        +   Q  G  +ASP+KS+VSK  DLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV

Q66IJ0 Nucleoporin NUP353.4e-1827.27Show/hide
Query:  PNSGRQSL---FYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPMQR
        P++G Q L      D+ +P+T ++        +  V  +          P P V T  D SG+   P   I     SP L S P  P ++  F       
Subjt:  PNSGRQSL---FYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPMQR

Query:  KSNTSTSYTPRSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGAL----ITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLREFEKCG
            S  +TP SG    +       +     +  P   V  P  +     T  +P ++     + + L +    ++ W+TV+GF  A  + +L +F + G
Subjt:  KSNTSTSYTPRSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGAL----ITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLREFEKCG

Query:  EILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAI--PPVSS--RTSELVATRGPARPYNLQNCNSNP
         I+KHV    + NWMHI YQ++  A KAL+K+G      I++GVKP   +      EK++ P   ++  PPV +    ++ V T   A    L      P
Subjt:  EILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAI--PPVSS--RTSELVATRGPARPYNLQNCNSNP

Query:  RQAEGINIA---SPTK--SLVSKAMDLMFG
          A+   +A   +P K  S+VSKAM+ MFG
Subjt:  RQAEGINIA---SPTK--SLVSKAMDLMFG

Q68FY1 Nucleoporin NUP354.1e-1627.48Show/hide
Query:  DLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPMQRKSNTSTSYTPRSGY
        DL +P+T +    S +G +  V  +          P P V    D SG+   P   I     SP L S P            P +R++N S   +P  G 
Subjt:  DLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPMQRKSNTSTSYTPRSGY

Query:  SLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLREFEKCGEILKHVTGPRDANWMHIF
        +  +T   G S       G P +         T  +P ++     + + L +    ++ W+TV+GF  A  + +L +F + G ILKHV      NWMHI 
Subjt:  SLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLREFEKCGEILKHVTGPRDANWMHIF

Query:  YQNRSDAHKALNKNGIQINGVIIVGVKP-VDPRHWQTLDE-KLNNPGFMAIPPVSS--------RTSELVATRGPARPYNLQNCNSNPRQAEGINIASPT
        YQ++  A KAL+K+G      I++GVKP +D    +  D   L++P     PP+ +         T  +   R  A  Y      S+ +           
Subjt:  YQNRSDAHKALNKNGIQINGVIIVGVKP-VDPRHWQTLDE-KLNNPGFMAIPPVSS--------RTSELVATRGPARPYNLQNCNSNPRQAEGINIASPT

Query:  KSLVSKAMDLMFG
        +SLVS+AM+ MFG
Subjt:  KSLVSKAMDLMFG

Q6P6X9 Nucleoporin NUP351.1e-1628.92Show/hide
Query:  TPNSGRQSL---FYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM-
        +P  G Q L      DL +P+T +   F  TG A   S L          P P V T  D SG              +P ++S     +       SP+ 
Subjt:  TPNSGRQSL---FYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPM-

Query:  QRKSNTSTSYTPRSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLREFEKCGEI
         RK   +  +TP SG             Q   G  S     +      TL +P ++     + + L +    ++ WITV+GF PA  + +L +F + G I
Subjt:  QRKSNTSTSYTPRSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLREFEKCGEI

Query:  LKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKP-VDPRHWQTLDEKLNNPGFMAIPPVS---SRTSELVATRGPARPYNLQNCNSNPRQ
        LKHV      NWMH+ YQ++  A KAL+K+G      I++GVKP +D    ++LD K +    +  PPV    + +  L   R   RP +     S+   
Subjt:  LKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKP-VDPRHWQTLDEKLNNPGFMAIPPVS---SRTSELVATRGPARPYNLQNCNSNPRQ

Query:  AEGINIASPTK--SLVSKAMDLMFG
            +  +P K  S VSKAM+ MFG
Subjt:  AEGINIASPTK--SLVSKAMDLMFG

Q8NFH5 Nucleoporin NUP358.3e-1726.84Show/hide
Query:  DLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPMQRKSNTSTSYTPRSGY
        DL +P+T +    S +G +  V  +          P P V    D SG+   P   I     SP L S   TP+ SR   +  + +      + TP +G 
Subjt:  DLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPMQRKSNTSTSYTPRSGY

Query:  SLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLREFEKCGEILKHVTGPRDANWMHIF
        S++  +  G   +                   T  +P ++     + + L +    ++ W+TV+GF  A  + +L +F + G ILKHV      NWMHI 
Subjt:  SLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLREFEKCGEILKHVTGPRDANWMHIF

Query:  YQNRSDAHKALNKNGIQINGVIIVGVKP-VDPRHWQTLDE-KLNNPGFMAIPPVSS--------RTSELVATRGPARPYNLQNCNSNPRQAEGINIASPT
        YQ++  A KAL+K+G      I++GVKP +D    ++ D   L++P     PP+ +         T  +   R  A  Y      S+ +           
Subjt:  YQNRSDAHKALNKNGIQINGVIIVGVKP-VDPRHWQTLDE-KLNNPGFMAIPPVSS--------RTSELVATRGPARPYNLQNCNSNPRQAEGINIASPT

Query:  KSLVSKAMDLMFG
        +SLVSKAM+ MFG
Subjt:  KSLVSKAMDLMFG

Arabidopsis top hitse value%identityAlignment
AT3G16310.1 mitotic phosphoprotein N' end (MPPN) family protein9.5e-10962.01Show/hide
Query:  HRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESR---------
        HRTP SGRQSL +QDLASP++ R+GKFS+ GQAAAVSALW+ENFG SDLPPPP++TLDD   SDFSPE GIA Y  SP+ KSD RTP +S          
Subjt:  HRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESR---------

Query:  -DFSSSPMQRKSNTSTSYTPRSGYSLWLTSKGGSS-EQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL
            +SP     N   S       S W  SK GSS EQ+DKGKGSPVEGV+QPGAL+TLP PRE+AR E++R  +P   L+EEEW+TVYGFSP DTN+VL
Subjt:  -DFSSSPMQRKSNTSTSYTPRSGYSLWLTSKGGSS-EQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVL

Query:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN
        REFEKCG +LKHV GPR+ANWMHI YQNRSDAHKALNK G+ INGV+IVGVKPVDP   Q L+E+LNN GFM +PP SS  +     R  +RP  LQN +
Subjt:  REFEKCGEILKHVTGPRDANWMHIFYQNRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCN

Query:  SNPRQAEGINIASPTKSLVSKAMDLMFGV
        +   Q  G  +ASP+KS+VSK  DLMFGV
Subjt:  SNPRQAEGINIASPTKSLVSKAMDLMFGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACTGTGCATAGAACTCCCAACTCTGGTAGGCAGTCATTGTTCTACCAAGATTTAGCATCACCTATTACGACCCGGAAAGGAAAGTTTTCGACTACAGGCCAAGC
AGCAGCTGTATCCGCCTTATGGCAAGAGAATTTCGGAAACTCGGATCTTCCTCCTCCTCCGGTTTTTACACTGGACGACAGCTCGGGCTCAGATTTTTCTCCTGAGTATG
GGATTGCAGGTTATCCTCTTTCCCCAGAACTTAAATCAGACCCGAGGACCCCTATCGAAAGTCGCGACTTCTCTTCGTCGCCGATGCAAAGGAAGTCTAATACCAGCACT
TCCTACACACCAAGGAGTGGTTACAGTTTGTGGTTGACATCGAAAGGCGGTAGCAGTGAGCAAGAAGATAAGGGAAAAGGTTCACCAGTTGAAGGTGTTATTCAACCTGG
TGCATTGATCACACTTCCTGCCCCAAGGGAAATTGCTAGGCTGGAGTTGGAGAGGAATTGTTTGCCTGCACCAAAACTCAATGAGGAGGAATGGATTACTGTCTATGGAT
TCTCCCCTGCTGATACAAATGTAGTTTTGAGGGAATTCGAAAAATGCGGTGAGATCTTGAAACACGTTACTGGTCCAAGAGATGCTAATTGGATGCACATTTTTTATCAG
AACCGATCTGATGCTCACAAAGCTCTCAACAAAAATGGTATCCAAATCAATGGTGTGATAATTGTTGGCGTGAAGCCAGTAGACCCAAGGCATTGGCAGACATTGGACGA
AAAGCTAAATAATCCAGGATTCATGGCTATCCCACCGGTATCTTCTCGAACCTCGGAACTCGTTGCAACGAGAGGGCCTGCTCGTCCCTACAATCTCCAAAATTGTAACA
GTAATCCACGGCAAGCAGAAGGTATCAACATTGCTTCGCCAACGAAATCATTAGTATCTAAAGCCATGGATTTGATGTTTGGAGTCTAG
mRNA sequenceShow/hide mRNA sequence
GAAAATCAAATTCCCAAATTCTCCATTCCAATCGAGGTTTAGGGTTTGAAATTCCAAGATCTTTTGGTATTTTTGTCCAAAATGGGCGTTTATTCCTAATTACTTCCGGA
GGGAAAAATCAAATTCCCAAATTCTCCATTCCAATCGATCACTTTCTGAAGTTGAAGTACATTTCTCTTATAAGCTATGGACACTGTGCATAGAACTCCCAACTCTGGTA
GGCAGTCATTGTTCTACCAAGATTTAGCATCACCTATTACGACCCGGAAAGGAAAGTTTTCGACTACAGGCCAAGCAGCAGCTGTATCCGCCTTATGGCAAGAGAATTTC
GGAAACTCGGATCTTCCTCCTCCTCCGGTTTTTACACTGGACGACAGCTCGGGCTCAGATTTTTCTCCTGAGTATGGGATTGCAGGTTATCCTCTTTCCCCAGAACTTAA
ATCAGACCCGAGGACCCCTATCGAAAGTCGCGACTTCTCTTCGTCGCCGATGCAAAGGAAGTCTAATACCAGCACTTCCTACACACCAAGGAGTGGTTACAGTTTGTGGT
TGACATCGAAAGGCGGTAGCAGTGAGCAAGAAGATAAGGGAAAAGGTTCACCAGTTGAAGGTGTTATTCAACCTGGTGCATTGATCACACTTCCTGCCCCAAGGGAAATT
GCTAGGCTGGAGTTGGAGAGGAATTGTTTGCCTGCACCAAAACTCAATGAGGAGGAATGGATTACTGTCTATGGATTCTCCCCTGCTGATACAAATGTAGTTTTGAGGGA
ATTCGAAAAATGCGGTGAGATCTTGAAACACGTTACTGGTCCAAGAGATGCTAATTGGATGCACATTTTTTATCAGAACCGATCTGATGCTCACAAAGCTCTCAACAAAA
ATGGTATCCAAATCAATGGTGTGATAATTGTTGGCGTGAAGCCAGTAGACCCAAGGCATTGGCAGACATTGGACGAAAAGCTAAATAATCCAGGATTCATGGCTATCCCA
CCGGTATCTTCTCGAACCTCGGAACTCGTTGCAACGAGAGGGCCTGCTCGTCCCTACAATCTCCAAAATTGTAACAGTAATCCACGGCAAGCAGAAGGTATCAACATTGC
TTCGCCAACGAAATCATTAGTATCTAAAGCCATGGATTTGATGTTTGGAGTCTAGGTTGGCTTCTCGTGGCGAATCGATTTTATGTGGAAAGAAATCGATTTGGTTCGAT
TTGTTAGATTGTTGTAGCTGTGTTCAATGTTCACAGTCCTCCATTTTGATTCTTGTGTTTGTTTTTTCTGATTCTTACTCTTACAAAATGAGATAAGAAAATGAACATGA
TGATGGAGCTGTCTTTAGGCCCTCAAGAACTAATACATGTCGTAGTTCATATGCTATATTGAGTGAGAATAGTCGAGCCGTGCATGTGAATGGAGGGTAGGAATCTGATT
TGTCATTTTGTCAAATTGTCTCATCGCGTGTGAAATCTAAGTAATGCATTTGTGAATATCATGGGG
Protein sequenceShow/hide protein sequence
MDTVHRTPNSGRQSLFYQDLASPITTRKGKFSTTGQAAAVSALWQENFGNSDLPPPPVFTLDDSSGSDFSPEYGIAGYPLSPELKSDPRTPIESRDFSSSPMQRKSNTST
SYTPRSGYSLWLTSKGGSSEQEDKGKGSPVEGVIQPGALITLPAPREIARLELERNCLPAPKLNEEEWITVYGFSPADTNVVLREFEKCGEILKHVTGPRDANWMHIFYQ
NRSDAHKALNKNGIQINGVIIVGVKPVDPRHWQTLDEKLNNPGFMAIPPVSSRTSELVATRGPARPYNLQNCNSNPRQAEGINIASPTKSLVSKAMDLMFGV