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Sed0014955 (gene) of Chayote v1 genome

Gene IDSed0014955
OrganismSechium edule (Chayote v1)
DescriptionGAG1At protein
Genome locationLG07:5479144..5481105
RNA-Seq ExpressionSed0014955
SyntenySed0014955
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3450986.1 hypothetical protein FNV43_RR07075 [Rhamnella rubrinervis]3.6e-2784.42Show/hide
Query:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        GG GGGGGGGFR+RMEHYIYSGDKKHV AGIAVIS++FGIPWVLM RG+KH+SHQDY+EKADKAR QRLSSG  SAK
Subjt:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

PON89323.1 GAG1At protein [Trema orientale]3.6e-2783.33Show/hide
Query:  SGGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        S G GGGGG GFR RMEHY+YSG+KKHV AGIA+IS++FGIPWVLMNRG+KHRSHQDY+EKADKARSQRLSS SSSAK
Subjt:  SGGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

XP_004135879.1 uncharacterized protein LOC101214375 [Cucumis sativus]4.7e-2784.62Show/hide
Query:  SGGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        SGGA  GG GGFRSRMEHY+YSGDKKHVAAGI +  ++FGIPW LMNRGSKHRSHQDYME+ADKARSQRLSSGSSSAK
Subjt:  SGGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

XP_010094051.1 uncharacterized protein LOC21401046 [Morus notabilis]5.5e-2883.12Show/hide
Query:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        GG G GGGGGFR+R++HY+YSG+KKHVAAGIA+I+++FGIPWVLMNRGSKH+SHQDY+EKADKARSQRLSSGSSSAK
Subjt:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

XP_022150938.1 uncharacterized protein LOC111018966 [Momordica charantia]1.1e-2887.01Show/hide
Query:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        GG GGGGG GFRSRMEH++YSGDKKHVAAGIAVIS++FGIPWVLM+RGSKH+SHQDYME+ADKARSQRLSSGSS AK
Subjt:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

TrEMBL top hitse value%identityAlignment
A0A2P5EUV7 GAG1At protein1.7e-2783.33Show/hide
Query:  SGGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        S G GGGGG GFR RMEHY+YSG+KKHV AGIA+IS++FGIPWVLMNRG+KHRSHQDY+EKADKARSQRLSS SSSAK
Subjt:  SGGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

A0A6A1WDR3 Uncharacterized protein2.3e-2782.05Show/hide
Query:  SGGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        +G   GGGGGGFRSR+EHY+YSGDKKHV AGIA+ISV+FG+PW LM+RGSKH+SHQDYMEKADKARSQRLSSG+SSAK
Subjt:  SGGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

A0A6J1DAT5 uncharacterized protein LOC1110189665.4e-2987.01Show/hide
Query:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        GG GGGGG GFRSRMEH++YSGDKKHVAAGIAVIS++FGIPWVLM+RGSKH+SHQDYME+ADKARSQRLSSGSS AK
Subjt:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

A0A6J1JZC0 uncharacterized protein LOC1114888023.8e-2783.13Show/hide
Query:  MSGGA--GG--GGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        MSG A  GG  GGGGGFRSRMEHY+YSG+KKHVAAGI VI ++FGIPW LMNRGSKH+SHQDYME+ADKARSQRLSSGSSSAK
Subjt:  MSGGA--GG--GGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

W9QVG6 Uncharacterized protein2.7e-2883.12Show/hide
Query:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        GG G GGGGGFR+R++HY+YSG+KKHVAAGIA+I+++FGIPWVLMNRGSKH+SHQDY+EKADKARSQRLSSGSSSAK
Subjt:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16000.1 unknown protein3.9e-2464.94Show/hide
Query:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        G A   GGGGFR++MEHY+YSG+KKHV  GI +++++FG+PW LM +GSKH+SHQDYM+KADKAR  RLSS SS+ K
Subjt:  GGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

AT1G80890.1 unknown protein8.5e-2776.06Show/hide
Query:  GGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        GGGG R++MEHY+YSG+KKHV AGI +IS++FGIPW LMN+GSKHRSHQDY+EKADKAR  RLSS SSS K
Subjt:  GGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGCGGCGCAGGCGGCGGCGGAGGAGGCGGTTTCAGATCGAGAATGGAGCACTATATTTACAGCGGCGACAAAAAGCACGTCGCGGCTGGCATCGCCGTCATTAG
CGTCCTTTTTGGCATCCCTTGGGTGCTCATGAACCGAGGATCAAAACATCGGTCTCATCAAGATTACATGGAAAAAGCCGACAAAGCCCGAAGTCAGAGACTCTCTTCAG
GTTCATCATCAGCTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATAAAATATAAATACACTGAATTTAGTCTTAAGTTTAGAACACCAAAAACACCATAACCAAACGCTCCCTAAAGCTTGACGGAGCATTAAGCGAAACTGGAAGTGGAGGA
TCGGCGGACAAAATGAGCGGCGGCGCAGGCGGCGGCGGAGGAGGCGGTTTCAGATCGAGAATGGAGCACTATATTTACAGCGGCGACAAAAAGCACGTCGCGGCTGGCAT
CGCCGTCATTAGCGTCCTTTTTGGCATCCCTTGGGTGCTCATGAACCGAGGATCAAAACATCGGTCTCATCAAGATTACATGGAAAAAGCCGACAAAGCCCGAAGTCAGA
GACTCTCTTCAGGTTCATCATCAGCTAAATAATTTTATTTTTGGCTTTCTTCTTTAGATGATGTTCTTCGGGGCACTTGGTTGGCATAAATTTTTTGTACTAGATCCTAT
ATTTTGCATTTTCCCCCTCCCTCGGCTGACACTAATGAAGACAAGTAAGTTGTACTCACCAAGGTGCACTTATGGATGTCAAATAAAGGATGGATTTTTTGTTCCTTTTT
GTACTATTTAGTCCCATTTACTACTGTCTATCCTAGTTTTAGTGTTAATACTTCTTAAATTGAGAGTCGCTGGAACGTGAATGATATTCAGGGAATTATTCAGTTAGAGT
AGTCAACCGGGTCCGGAAATTCTCTGATCCTGCTATTTTTTCCAGCCACTGAATATTTATAGTTCAGAATCAACATCTTTGATGAATGTATATAGCTGAAAGACA
Protein sequenceShow/hide protein sequence
MSGGAGGGGGGGFRSRMEHYIYSGDKKHVAAGIAVISVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK