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Sed0014956 (gene) of Chayote v1 genome

Gene IDSed0014956
OrganismSechium edule (Chayote v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationLG10:36204439..36207003
RNA-Seq ExpressionSed0014956
SyntenySed0014956
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148715.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]1.2e-2981.05Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQPPHHQQQKKQ-VGFLEGCLAALCCCFVLDACF
        MSYYNQ PPPPVGVPPPQGYPP GYPKDAYPPPGYPPQ GYPPP  P  G+ PPP Y PAYGQPP  QQQ++Q VGFLEGCLAALCCC +LDACF
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQPPHHQQQKKQ-VGFLEGCLAALCCCFVLDACF

XP_022927665.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]1.7e-2877.89Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF
        MSYYNQ PPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPP   P  G+ PPP Y PAYGQ PP +QQQ+++VGFLEGC+AALCCCFVLDACF
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF

XP_023529875.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]4.9e-2876.84Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF
        MSY+NQ PPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPP   P  G+ PPP Y PAYGQ PP +QQQ+++VGFLEGC+AALCCCFVLDACF
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF

XP_023553865.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]2.2e-2879.17Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQP-PHHQQQKKQVGFLEGCLAALCCCFVLDACF
        MSYYNQ PPPPVGVPPPQGYPP GY PKDAYPPPGYPPQGGYPP   P  G+ PPP Y PAYG P P H  QKK+VGF+EGCLAALCCCFVLD CF
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQP-PHHQQQKKQVGFLEGCLAALCCCFVLDACF

XP_038888465.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]8.1e-3180.21Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF
        MSYY Q PPPPVGVPPPQG+PP GY PKD YPPPGYPPQGGYPP   P  GHPPPP YAPAYG  PPHHQ QKK+VGF+EGCLAALCCCF+LD CF
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0K2W8 Uncharacterized protein5.3e-2877.08Show/hide
Query:  SYYNQPPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ--PPHHQQQKKQVGFLEGCLAALCCCFVLDACF
        SYY Q PPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPP   P  G+PPPP Y PAYG   PP HQ QKK+VGF+EGCLAALCCCF+LD CF
Subjt:  SYYNQPPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ--PPHHQQQKKQVGFLEGCLAALCCCFVLDACF

A0A6J1D3P4 cysteine-rich and transmembrane domain-containing protein WIH2-like5.7e-3081.05Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQPPHHQQQKKQ-VGFLEGCLAALCCCFVLDACF
        MSYYNQ PPPPVGVPPPQGYPP GYPKDAYPPPGYPPQ GYPPP  P  G+ PPP Y PAYGQPP  QQQ++Q VGFLEGCLAALCCC +LDACF
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQPPHHQQQKKQ-VGFLEGCLAALCCCFVLDACF

A0A6J1EPM1 cysteine-rich and transmembrane domain-containing protein WIH2-like8.2e-2977.89Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF
        MSYYNQ PPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPP   P  G+ PPP Y PAYGQ PP +QQQ+++VGFLEGC+AALCCCFVLDACF
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF

A0A6J1I9Y5 cysteine-rich and transmembrane domain-containing protein WIH2-like1.0e-2677.66Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPPPAYGHPPPPVYAPAYGQP-PHHQQQKKQVGFLEGCLAALCCCFVLDACF
        MSYYNQ PPPPVGVPPPQGYPP GY PKDAYPPPGYPPQGGYPP    G+PP     PAYG P P H  QKK+VGF+EGCLAALCCCFVLD CF
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPPPAYGHPPPPVYAPAYGQP-PHHQQQKKQVGFLEGCLAALCCCFVLDACF

A0A6J1JP18 cysteine-rich and transmembrane domain-containing protein WIH2-like8.2e-2977.89Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF
        MSYYNQ PPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPP   P  G+ PPP Y PAYGQ PP +QQQ+++VGFLEGC+AALCCCFVLDACF
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP--PAYGHPPPPVYAPAYGQ-PPHHQQQKKQVGFLEGCLAALCCCFVLDACF

SwissProt top hitse value%identityAlignment
P31356 Rhodopsin7.9e-0556.36Show/hide
Query:  PPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPPPAYGHPPPPVYAPAYGQPP
        PP    PPPQGYPP GYP   YPP GYPPQ         G+PPPP  AP  G PP
Subjt:  PPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPPPAYGHPPPPVYAPAYGQPP

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B7.1e-1457.73Show/hide
Query:  PPPVGVPPPQGYPPAGYPKDAYPPPGYP-PQGGYPPPPAY--------GHPP---PPVYAPAYGQPPHHQQQKK-QVGFLEGCLAALCCCFVLDACF
        PP VGVPP   YP  G PKDAYPPPG P PQ GYPPP  Y        G+PP   P    P  G PP  QQQ+K   G LEGC+AALCC  VLDACF
Subjt:  PPPVGVPPPQGYPPAGYPKDAYPPPGYP-PQGGYPPPPAY--------GHPP---PPVYAPAYGQPPHHQQQKK-QVGFLEGCLAALCCCFVLDACF

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH24.8e-2669.31Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQG----GYPPP--PAYGHPP---PPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDAC
        MS YNQ   PPVGVPPPQGYPP GYPKDAYPP GYPPQG    GYPP   P  G+P    PP YAP Y  PP HQQQ+   GFLEGCLAALCCC +LDAC
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQG----GYPPP--PAYGHPP---PPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDAC

Query:  F
        F
Subjt:  F

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH18.4e-1561.36Show/hide
Query:  PVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP------PAYGHPPPPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDACF
        PVG PPPQGYP    PKD YPP GYPP  GYPPP      PA G+PP     P Y Q P   QQK+  G LEGCLAALCCC +LDACF
Subjt:  PVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP------PAYGHPPPPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDACF

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein3.4e-2769.31Show/hide
Query:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQG----GYPPP--PAYGHPP---PPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDAC
        MS YNQ   PPVGVPPPQGYPP GYPKDAYPP GYPPQG    GYPP   P  G+P    PP YAP Y  PP HQQQ+   GFLEGCLAALCCC +LDAC
Subjt:  MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQG----GYPPP--PAYGHPP---PPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDAC

Query:  F
        F
Subjt:  F

AT3G49845.1 unknown protein1.5e-1451.79Show/hide
Query:  PPPVGVPPPQGYPPAGYPKDA-YPPPGYP----PQGGYPPP--------PAYGHPP-------PPVY------APAYGQ-PPHHQQQKKQV-GFLEGCLA
        PPP G PP +GYPPAGYP  A YPPP YP    P  GYPPP        PA G+PP       PP Y       P YGQ PP +++ KK   GF+EGCLA
Subjt:  PPPVGVPPPQGYPPAGYPKDA-YPPPGYP----PQGGYPPP--------PAYGHPP-------PPVY------APAYGQ-PPHHQQQKKQV-GFLEGCLA

Query:  ALCCCFVLDACF
         LCCC +L+ACF
Subjt:  ALCCCFVLDACF

AT5G45350.1 proline-rich family protein1.9e-0642.86Show/hide
Query:  PPVGVPPPQGYPPAGYPKDAYPPP-------GYPP------QGGYPPPPAY-GHPPPPVYA-----------PAYGQPPHHQQQKKQV-GFLEGCLAA
        PP G PPP  YPPAGYP+  YPPP       GYPP       GGYPP P Y G+PP P Y            P  G P HH      + G + G  AA
Subjt:  PPVGVPPPQGYPPAGYPKDAYPPP-------GYPP------QGGYPPPPAY-GHPPPPVYA-----------PAYGQPPHHQQQKKQV-GFLEGCLAA

AT5G45350.2 proline-rich family protein1.9e-0642.86Show/hide
Query:  PPVGVPPPQGYPPAGYPKDAYPPP-------GYPP------QGGYPPPPAY-GHPPPPVYA-----------PAYGQPPHHQQQKKQV-GFLEGCLAA
        PP G PPP  YPPAGYP+  YPPP       GYPP       GGYPP P Y G+PP P Y            P  G P HH      + G + G  AA
Subjt:  PPVGVPPPQGYPPAGYPKDAYPPP-------GYPP------QGGYPPPPAY-GHPPPPVYA-----------PAYGQPPHHQQQKKQV-GFLEGCLAA

AT5G67600.1 unknown protein6.0e-1661.36Show/hide
Query:  PVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP------PAYGHPPPPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDACF
        PVG PPPQGYP    PKD YPP GYPP  GYPPP      PA G+PP     P Y Q P   QQK+  G LEGCLAALCCC +LDACF
Subjt:  PVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPP------PAYGHPPPPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTACAACCAGCCACCGCCGCCTCCCGTCGGCGTTCCTCCGCCTCAAGGTTATCCTCCGGCAGGTTATCCAAAAGACGCCTATCCGCCGCCAGGATATCCACC
GCAGGGCGGTTATCCTCCGCCGCCGGCATATGGTCACCCACCGCCGCCGGTTTATGCTCCGGCGTACGGCCAGCCTCCACATCATCAACAACAAAAGAAACAAGTTGGAT
TCCTGGAAGGCTGTTTGGCTGCTCTTTGCTGTTGCTTCGTCTTGGATGCTTGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGAAATCCGGCCATAAAGTCAATCTTTATTCGTAAAGTTCAATCGTTATAGCTCTGGTCTCTTTGTTTGGGAACTAAGAAAATAAATTTGATCGAACAAATCTGAGA
GAAGGAAAAAATGAGTTACTACAACCAGCCACCGCCGCCTCCCGTCGGCGTTCCTCCGCCTCAAGGTTATCCTCCGGCAGGTTATCCAAAAGACGCCTATCCGCCGCCAG
GATATCCACCGCAGGGCGGTTATCCTCCGCCGCCGGCATATGGTCACCCACCGCCGCCGGTTTATGCTCCGGCGTACGGCCAGCCTCCACATCATCAACAACAAAAGAAA
CAAGTTGGATTCCTGGAAGGCTGTTTGGCTGCTCTTTGCTGTTGCTTCGTCTTGGATGCTTGCTTTTAAGGACACAACATACAACATTTATGATATTGATCATATGGCGT
ATAAAGTTTGTAACTTTATTTTGATTTATATTTGAATTTGATTACGATTTATAATGTCCAATATTTCTTATATCCATATCTTGCCAGTGTGTAACATCCATATATCTTTT
TACTCTCATTAGAATATACTATATTTCTCATTATATTTCCTGAACCTTGC
Protein sequenceShow/hide protein sequence
MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPPPAYGHPPPPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDACF