CuGenDBv2

Gene ID	Sed0014962
Organism	Sechium edule (Chayote v1)
Description	Actin cytoskeleton-regulatory complex protein
Genome location	LG13:5339381..5340313
RNA-Seq Expression	Sed0014962
Synteny	Sed0014962
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004148978.1 uncharacterized protein LOC101205531 [Cucumis sativus]

1.6e-43

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAFVRG+ TMNSMF KPIGRKGFH+KSSSPDMMRERVETESKELKSN++HVGG+ TPW+LD RTGIYYPKGHEKVL SIPDGGGAAVN  VNWFN+EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

XP_008451903.1 PREDICTED: uncharacterized protein LOC103493056 [Cucumis melo]

2.7e-43

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAFVRG+ TMNSMF KPIGRKGFH+KSSSPDMMRERVETESKELKSN++HVGG+ATPW+LD RTGIYYPKGHEKVL+ IPDGGGA VN  VNWFN+EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

XP_022136654.1 uncharacterized protein LOC111008306 [Momordica charantia]

2.0e-43

87.13

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAFVRG+QTMNSMF KPIGRKGFH+KSSSPDMMRERVETESKE+KSNK+HV G+ATPW+LDVRTGIYYPKGHEKVLESIPDGGGAAVN+ VN F++EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

Query:  S
        S
Subjt:  S

XP_022931383.1 uncharacterized protein LOC111437581 [Cucurbita moschata]

2.9e-42

85.15

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAFVRG+QTMNSMF KPIGRKGFH+KSSSPDMMRERVETESKELKSNK+ V G+ TPW+LD RTGIYYPKGHE VLESIP+GGGAAVN  VNWFN+EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

Query:  S
        S
Subjt:  S

XP_038884831.1 uncharacterized protein LOC120075477 [Benincasa hispida]

4.1e-44

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAF RG+QTMNSMF KPIGRKGFH+KSSSPDM+RERVETESKE+KSNK+HVGG+ATPW+LD RTGIYYPKGHEKVLESIPDGGGAAVN  VNWFN+EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KX78 Uncharacterized protein

7.6e-44

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAFVRG+ TMNSMF KPIGRKGFH+KSSSPDMMRERVETESKELKSN++HVGG+ TPW+LD RTGIYYPKGHEKVL SIPDGGGAAVN  VNWFN+EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

A0A1S3BTQ2 uncharacterized protein LOC103493056

1.3e-43

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAFVRG+ TMNSMF KPIGRKGFH+KSSSPDMMRERVETESKELKSN++HVGG+ATPW+LD RTGIYYPKGHEKVL+ IPDGGGA VN  VNWFN+EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

A0A6J1C4X8 uncharacterized protein LOC111008306

9.9e-44

87.13

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAFVRG+QTMNSMF KPIGRKGFH+KSSSPDMMRERVETESKE+KSNK+HV G+ATPW+LDVRTGIYYPKGHEKVLESIPDGGGAAVN+ VN F++EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

Query:  S
        S
Subjt:  S

A0A6J1EYH0 uncharacterized protein LOC111437581

1.4e-42

85.15

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAFVRG+QTMNSMF KPIGRKGFH+KSSSPDMMRERVETESKELKSNK+ V G+ TPW+LD RTGIYYPKGHE VLESIP+GGGAAVN  VNWFN+EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

Query:  S
        S
Subjt:  S

A0A6J1J914 uncharacterized protein LOC111482845

4.1e-42

84.16

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Query:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN
        MATAFVRG+Q+MNSMF KPIGRKGFH+KSSSPDMMRERVETESKELKSNK+ V G+ TPW+LD RTGIYYPKGHE VLESIP+GGGAAVN  VNWFN+EN
Subjt:  MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNEN

Query:  S
        S
Subjt:  S

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G73120.1 unknown protein

1.3e-16

43.56

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Query:  RGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETE----SKELKSNKNHVG-----GDATPWILDVRTGIYYPKGHEKVLESI-PDGGGAAVNIPVNWF
        RG+QTMN+MF+KP+ RK  HKKS+S D++R+ V+TE     +E+K+ +   G       A+ W+    TGIYYPKG EKV++ + P   G+  +  VNWF
Subjt:  RGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETE----SKELKSNKNHVG-----GDATPWILDVRTGIYYPKGHEKVLESI-PDGGGAAVNIPVNWF

Query:  N
        +
Subjt:  N

AT3G19550.1 unknown protein

9.9e-04

26.87

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Query:  GRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGA
        GR G   K++  + M   +    +++  +     G+   W+   RTGI++P G E V+E +P+G  +
Subjt:  GRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGA

Sequences

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CDS sequence

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ATGGCCACTGCATTTGTGAGAGGGTCCCAGACAATGAACTCCATGTTCATCAAACCGATCGGTCGAAAGGGCTTCCACAAGAAAAGCTCTTCCCCGGATATGATGAGGGA
GAGAGTTGAAACAGAAAGCAAGGAACTGAAGAGTAATAAGAACCATGTGGGGGGTGATGCAACTCCATGGATCCTTGATGTGCGAACTGGGATTTATTATCCGAAAGGCC
ATGAGAAGGTCCTCGAGAGCATTCCCGACGGCGGTGGGGCTGCAGTCAACATCCCAGTCAATTGGTTTAACAACGAAAACAGTTAA

mRNA sequence

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Protein sequence

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MATAFVRGSQTMNSMFIKPIGRKGFHKKSSSPDMMRERVETESKELKSNKNHVGGDATPWILDVRTGIYYPKGHEKVLESIPDGGGAAVNIPVNWFNNENS

Sed0014962 (gene) of Chayote v1 genome