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Sed0014970 (gene) of Chayote v1 genome

Gene IDSed0014970
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein-like
Genome locationLG05:43940343..43942612
RNA-Seq ExpressionSed0014970
SyntenySed0014970
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
InterPro domainsIPR030513 - Dehydrin, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045580.1 late embryogenesis abundant protein-like [Cucumis melo var. makuwa]4.5e-1450.4Show/hide
Query:  PVQLTDEFGNPIQVTGVATTGSKPESIMHPTDVSTTGSNLEPR--GADVGQMQLPRE-HEGLPRRSSSSSSVSKTFACRRTTGK------------VTST
        PVQLTDEFGNP+ +TGV   G+ P  +    D +   SNL P   G +V Q Q PRE H+  PRRSSSSSS SK       +GK             T+ 
Subjt:  PVQLTDEFGNPIQVTGVATTGSKPESIMHPTDVSTTGSNLEPR--GADVGQMQLPRE-HEGLPRRSSSSSSVSKTFACRRTTGK------------VTST

Query:  ASVEHQEHGKKGAIGKIKEKLPGHH
         SVEHQE GKKG + KIKEKLPGHH
Subjt:  ASVEHQEHGKKGAIGKIKEKLPGHH
XP_004150075.1 embryogenic cell protein 40 [Cucumis sativus]2.7e-1447.97Show/hide
Query:  PVQLTDEFGNPIQVTG-VATTGSK----PESIMHPTDVSTTGSNLEPRGADVGQMQLPRE-HEGLPRRSSSSSSVSK----TFACRR-------------
        PVQLTDEFGNP+Q+TG V TT S     P S +HPT V+TTG N       V Q Q PRE H+  PRRSSSSSS S         RR             
Subjt:  PVQLTDEFGNPIQVTG-VATTGSK----PESIMHPTDVSTTGSNLEPRGADVGQMQLPRE-HEGLPRRSSSSSSVSK----TFACRR-------------

Query:  ----------TTGK-----VTSTASVEHQEHGKKGAIGKIKEKLPGHH
                  TTG+      T+T SVEH E GKKG + KIKEKLPGHH
Subjt:  ----------TTGK-----VTSTASVEHQEHGKKGAIGKIKEKLPGHH
XP_022944216.1 late embryogenesis abundant protein-like [Cucurbita moschata]1.3e-1338.71Show/hide
Query:  PVQLTDEFGNPIQVTGVATTGSKP--------------------------------------ESIMHPTDVSTTGSNLEPRGAD-VGQMQLPRE-HEGLP
        PVQLTDEFGNP+Q+TGVATTGS+P                                       + MHPT V+TTGS     G D VG+ Q  RE H+   
Subjt:  PVQLTDEFGNPIQVTGVATTGSKP--------------------------------------ESIMHPTDVSTTGSNLEPRGAD-VGQMQLPRE-HEGLP

Query:  RRSSSSSSVSK------------------------------------TFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
         RSSSSSS S                                     T A    +  VTST  VEHQEHGKKG + KIKEKLPGHH
Subjt:  RRSSSSSSVSK------------------------------------TFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
XP_022986610.1 late embryogenesis abundant protein-like [Cucurbita maxima]9.1e-1543.31Show/hide
Query:  PVQLTDEFGNPIQVTGVATTGSKP-----------ESIMHPTDVSTTGSNLEPRGAD-VGQMQLPRE-HEGLPRRSSSSSSVSK----------------
        PVQ+++EFGNP+  TGV+TTGSKP            + MHPT V+TTGS     G D VG+ Q  RE H+    RSSSSSS S                 
Subjt:  PVQLTDEFGNPIQVTGVATTGSKP-----------ESIMHPTDVSTTGSNLEPRGAD-VGQMQLPRE-HEGLPRRSSSSSSVSK----------------

Query:  ------------------TFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
                          T A    +  VTST  VEHQEHGKKG + KIKEKLPGHH
Subjt:  ------------------TFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
XP_023513012.1 late embryogenesis abundant protein-like [Cucurbita pepo subsp. pepo]2.2e-1340Show/hide
Query:  PVQLTDEFGNPIQVTGVATTGSKP-----------ESIMHPTDVSTTGSN---------------LEPRGAD-------------VGQMQLPRE-HEGLP
        PVQLTDEFGNP+Q+TGVATTGS+P            + MHPT VSTTG N               + P G               VG+ Q  RE H+   
Subjt:  PVQLTDEFGNPIQVTGVATTGSKP-----------ESIMHPTDVSTTGSN---------------LEPRGAD-------------VGQMQLPRE-HEGLP

Query:  RRSSSSSSVS----------------------------KTFACRRTTG-------KVTSTASVEHQEHGKKGAIGKIKEKLPGHH
         RSSSSSS S                            K      TTG        VTST  VEH EHGKKG + KIKEKLPGHH
Subjt:  RRSSSSSSVS----------------------------KTFACRRTTG-------KVTSTASVEHQEHGKKGAIGKIKEKLPGHH
TrEMBL top hitse value%identityAlignment
A0A0A0LPB7 Uncharacterized protein1.3e-1447.97Show/hide
Query:  PVQLTDEFGNPIQVTG-VATTGSK----PESIMHPTDVSTTGSNLEPRGADVGQMQLPRE-HEGLPRRSSSSSSVSK----TFACRR-------------
        PVQLTDEFGNP+Q+TG V TT S     P S +HPT V+TTG N       V Q Q PRE H+  PRRSSSSSS S         RR             
Subjt:  PVQLTDEFGNPIQVTG-VATTGSK----PESIMHPTDVSTTGSNLEPRGADVGQMQLPRE-HEGLPRRSSSSSSVSK----TFACRR-------------

Query:  ----------TTGK-----VTSTASVEHQEHGKKGAIGKIKEKLPGHH
                  TTG+      T+T SVEH E GKKG + KIKEKLPGHH
Subjt:  ----------TTGK-----VTSTASVEHQEHGKKGAIGKIKEKLPGHH
A0A1S3CDP4 late embryogenesis abundant protein-like3.5e-1243.36Show/hide
Query:  PVQLTDEFGNPIQVTGVATTGSKPESIMHPTDVSTTGSNLEPR--GADVGQMQLPRE-HEGLPRRSSSSSSVS---------------------------
        PVQLTDEFGNP+ +TGV   G+ P  +    D +   SNL P   G +V Q Q PRE H+  PRRSSSSSS S                           
Subjt:  PVQLTDEFGNPIQVTGVATTGSKPESIMHPTDVSTTGSNLEPR--GADVGQMQLPRE-HEGLPRRSSSSSSVS---------------------------

Query:  ---KTFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
           K      +T   T+  SVEHQE GKKG + KIKEKLPGHH
Subjt:  ---KTFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
A0A5D3DZ78 Late embryogenesis abundant protein-like2.2e-1450.4Show/hide
Query:  PVQLTDEFGNPIQVTGVATTGSKPESIMHPTDVSTTGSNLEPR--GADVGQMQLPRE-HEGLPRRSSSSSSVSKTFACRRTTGK------------VTST
        PVQLTDEFGNP+ +TGV   G+ P  +    D +   SNL P   G +V Q Q PRE H+  PRRSSSSSS SK       +GK             T+ 
Subjt:  PVQLTDEFGNPIQVTGVATTGSKPESIMHPTDVSTTGSNLEPR--GADVGQMQLPRE-HEGLPRRSSSSSSVSKTFACRRTTGK------------VTST

Query:  ASVEHQEHGKKGAIGKIKEKLPGHH
         SVEHQE GKKG + KIKEKLPGHH
Subjt:  ASVEHQEHGKKGAIGKIKEKLPGHH
A0A6J1FTT6 late embryogenesis abundant protein-like6.4e-1438.71Show/hide
Query:  PVQLTDEFGNPIQVTGVATTGSKP--------------------------------------ESIMHPTDVSTTGSNLEPRGAD-VGQMQLPRE-HEGLP
        PVQLTDEFGNP+Q+TGVATTGS+P                                       + MHPT V+TTGS     G D VG+ Q  RE H+   
Subjt:  PVQLTDEFGNPIQVTGVATTGSKP--------------------------------------ESIMHPTDVSTTGSNLEPRGAD-VGQMQLPRE-HEGLP

Query:  RRSSSSSSVSK------------------------------------TFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
         RSSSSSS S                                     T A    +  VTST  VEHQEHGKKG + KIKEKLPGHH
Subjt:  RRSSSSSSVSK------------------------------------TFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
A0A6J1JEI1 late embryogenesis abundant protein-like4.4e-1543.31Show/hide
Query:  PVQLTDEFGNPIQVTGVATTGSKP-----------ESIMHPTDVSTTGSNLEPRGAD-VGQMQLPRE-HEGLPRRSSSSSSVSK----------------
        PVQ+++EFGNP+  TGV+TTGSKP            + MHPT V+TTGS     G D VG+ Q  RE H+    RSSSSSS S                 
Subjt:  PVQLTDEFGNPIQVTGVATTGSKP-----------ESIMHPTDVSTTGSNLEPRGAD-VGQMQLPRE-HEGLPRRSSSSSSVSK----------------

Query:  ------------------TFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
                          T A    +  VTST  VEHQEHGKKG + KIKEKLPGHH
Subjt:  ------------------TFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
SwissProt top hitse value%identityAlignment
P21298 Late embryogenesis abundant protein2.1e-0631.25Show/hide
Query:  PVQLTDEFGNPIQVTGVATTGSKPESIM------HPTDVSTTG-------SNLEPRGADVGQMQLPREHEG-----LPRRSSSSSSVS------------
        PVQL+DEFGNP+ +TGVA++  + +  +      +PT+    G       +     G    +    +EH G     L R  SSSSS S            
Subjt:  PVQLTDEFGNPIQVTGVATTGSKPESIM------HPTDVSTTG-------SNLEPRGADVGQMQLPREHEG-----LPRRSSSSSSVS------------

Query:  -----------------KTFACRRTTG---KVTSTASVEHQEHGKKGAIGKIKEKLPGHH
                         +T     TTG     T+T +   Q H KKG + KIKEKLPGHH
Subjt:  -----------------KTFACRRTTG---KVTSTASVEHQEHGKKGAIGKIKEKLPGHH
Arabidopsis top hitse value%identityAlignment
AT2G21490.1 dehydrin LEA4.5e-0432.52Show/hide
Query:  VQLTDEFGNPIQVTG-VATTGSKPESIM-----HPTD-VSTTGSNLEPRG-------------ADVGQMQLPREHEG-----LPRRSSSSSSVS------
        V LTDE GNP+ +TG V++T    ES       HPT  V  T     P G             A  G     ++H G     L R  SSSSS S      
Subjt:  VQLTDEFGNPIQVTG-VATTGSKPESIM-----HPTD-VSTTGSNLEPRG-------------ADVGQMQLPREHEG-----LPRRSSSSSSVS------

Query:  -----------------------KTFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
                               +T A   TTG  T+      Q H KKG + KIK+KLPGHH
Subjt:  -----------------------KTFACRRTTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
AT4G39130.1 Dehydrin family protein2.4e-0529.32Show/hide
Query:  SNSAPVQLTDEFGNPIQVTGVATT--------GSKPESIMHPTDVSTTGSNLEPRGAD-----------VGQMQLPREHEGLPRRSSSSSSVSKTFACRR
        ++  P QL DEFGN + +TGVATT         + P  I  P   + T  + +P                G        EG+ R+++ +          +
Subjt:  SNSAPVQLTDEFGNPIQVTGVATT--------GSKPESIMHPTDVSTTGSNLEPRGAD-----------VGQMQLPREHEGLPRRSSSSSSVSKTFACRR

Query:  TTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH
         +   T T S     H KKG   KIKEKL GHH
Subjt:  TTGKVTSTASVEHQEHGKKGAIGKIKEKLPGHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAGAACCATCGGCTTCAGTGCCTCGCCAATGGAAACATGGCCGTAAGAAGTTTCGTTCCAATTCAGCTCCTGTTCAGTTGACTGACGAATTCGGCAACCCCAT
TCAAGTAACTGGCGTTGCCACCACCGGGTCCAAGCCCGAGTCGATCATGCACCCCACTGATGTTTCCACGACGGGATCCAATCTCGAGCCGAGGGGTGCTGATGTTGGCC
AGATGCAGCTCCCTCGGGAGCACGAGGGATTGCCTCGTCGATCTAGTAGCTCCAGCTCGGTGAGTAAGACTTTTGCTTGTCGGAGGACGACGGGCAAGGTTACGTCAACA
GCGAGCGTCGAGCATCAAGAACATGGGAAGAAGGGGGCTATTGGGAAGATTAAAGAGAAGCTGCCCGGCCACCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAAGAACCATCGGCTTCAGTGCCTCGCCAATGGAAACATGGCCGTAAGAAGTTTCGTTCCAATTCAGCTCCTGTTCAGTTGACTGACGAATTCGGCAACCCCAT
TCAAGTAACTGGCGTTGCCACCACCGGGTCCAAGCCCGAGTCGATCATGCACCCCACTGATGTTTCCACGACGGGATCCAATCTCGAGCCGAGGGGTGCTGATGTTGGCC
AGATGCAGCTCCCTCGGGAGCACGAGGGATTGCCTCGTCGATCTAGTAGCTCCAGCTCGGTGAGTAAGACTTTTGCTTGTCGGAGGACGACGGGCAAGGTTACGTCAACA
GCGAGCGTCGAGCATCAAGAACATGGGAAGAAGGGGGCTATTGGGAAGATTAAAGAGAAGCTGCCCGGCCACCATTGA
Protein sequenceShow/hide protein sequence
MKQEPSASVPRQWKHGRKKFRSNSAPVQLTDEFGNPIQVTGVATTGSKPESIMHPTDVSTTGSNLEPRGADVGQMQLPREHEGLPRRSSSSSSVSKTFACRRTTGKVTST
ASVEHQEHGKKGAIGKIKEKLPGHH