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Sed0014985 (gene) of Chayote v1 genome

Gene IDSed0014985
OrganismSechium edule (Chayote v1)
DescriptionMyelin transcription factor 1-like protein
Genome locationLG08:398683..399298
RNA-Seq ExpressionSed0014985
SyntenySed0014985
Gene Ontology termsGO:0070125 - mitochondrial translational elongation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057816.1 hypothetical protein E6C27_scaffold274G001000 [Cucumis melo var. makuwa]2.8e-3572.52Show/hide
Query:  RAMSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLV
        R M TP  ATA  T+AIF+L+SGLC VVFN D +MGRW+PI+GL+ V GVA+  AARATMV WITVLVLLAFAGNRRRVLVK GR+IT DVAMYLA+V+V
Subjt:  RAMSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLV

Query:  KERGFLAVAFAAVFSLIAVVRSSEIDPFSVF
        KERG LAVAFAA+FS +AV RS+EID  S F
Subjt:  KERGFLAVAFAAVFSLIAVVRSSEIDPFSVF

KAG7021425.1 hypothetical protein SDJN02_15150, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-3476.92Show/hide
Query:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE
        MSTP    A   + IFLL+SG CIVV N DL MGRWVPIVGL+VV GVAV  AARATMV WITVLVLLAFAGNRRRVLVKQGRQIT DVAMYL AVLVKE
Subjt:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE

Query:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV
        RG +AVAFAAV S  AVVRS EID  SV V
Subjt:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV

XP_022933693.1 uncharacterized protein LOC111441029 [Cucurbita moschata]1.4e-3476.92Show/hide
Query:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE
        MSTP    A   + IFLL+SG CIVV N DL MGRWVPIVGL+VV GVAV  AARATMV WITVLVLLAFAGNRRRVLVKQGRQIT DVAMYL AVLVKE
Subjt:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE

Query:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV
        RG +AV FAAV SL+AVVRS EID  SV V
Subjt:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV

XP_023004957.1 uncharacterized protein LOC111498104 [Cucurbita maxima]3.7e-3577.69Show/hide
Query:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE
        MSTPA   A   + IFLL+SG CIVV N DL MGRWVPIVGL+VV GVAV  AARATMV WITVLVLLAFAGNRRRVLVKQGRQIT DVAMYL+AVLVKE
Subjt:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE

Query:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV
        RG +AVAFAAV S +AVVRS EID  SV V
Subjt:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV

XP_023530771.1 uncharacterized protein LOC111793221 [Cucurbita pepo subsp. pepo]1.4e-3476.92Show/hide
Query:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE
        MSTP    A   + IFLL+SG CIVV N DL MGRWVPIVGL+VV GVAV  AARATMV WITVLVLLAFAGNRRRVLVKQGRQIT DVAMYL AVLVKE
Subjt:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE

Query:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV
        RG +AVAFAAV S +AVVRS EID  SV V
Subjt:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV

TrEMBL top hitse value%identityAlignment
A0A0A0LNT4 Uncharacterized protein4.9e-3371.9Show/hide
Query:  AATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLAVAF
        A  T+AIF+L+SGLC +VFN D +MGRW+PI+GL + V V V  AARATMV WITVLVLLAFAGNRRRVLVK GR+IT DVAMYLA+V+VKERG LAVAF
Subjt:  AATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLAVAF

Query:  AAVFSLIAVVRSSEIDPFSVF
        AA+FS +AV+RS+EID  S F
Subjt:  AAVFSLIAVVRSSEIDPFSVF

A0A0A0LRZ2 Uncharacterized protein3.7e-3370.97Show/hide
Query:  PATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLA
        P TA  T+AIF+L+SGLC +VFN D +MGRW+PI+GL+ V  VA+  AARATMV WITVLVLLAFAGNRRRVLVK GR+IT DVAMYLA+V+VKERG LA
Subjt:  PATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLA

Query:  VAFAAVFSLIAVVRSSEIDPFSVF
        VAFAA+FS +AV+RS+EI   S F
Subjt:  VAFAAVFSLIAVVRSSEIDPFSVF

A0A5D3BFC5 Uncharacterized protein1.4e-3572.52Show/hide
Query:  RAMSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLV
        R M TP  ATA  T+AIF+L+SGLC VVFN D +MGRW+PI+GL+ V GVA+  AARATMV WITVLVLLAFAGNRRRVLVK GR+IT DVAMYLA+V+V
Subjt:  RAMSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLV

Query:  KERGFLAVAFAAVFSLIAVVRSSEIDPFSVF
        KERG LAVAFAA+FS +AV RS+EID  S F
Subjt:  KERGFLAVAFAAVFSLIAVVRSSEIDPFSVF

A0A6J1F5J3 uncharacterized protein LOC1114410296.8e-3576.92Show/hide
Query:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE
        MSTP    A   + IFLL+SG CIVV N DL MGRWVPIVGL+VV GVAV  AARATMV WITVLVLLAFAGNRRRVLVKQGRQIT DVAMYL AVLVKE
Subjt:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE

Query:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV
        RG +AV FAAV SL+AVVRS EID  SV V
Subjt:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV

A0A6J1KRU7 uncharacterized protein LOC1114981041.8e-3577.69Show/hide
Query:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE
        MSTPA   A   + IFLL+SG CIVV N DL MGRWVPIVGL+VV GVAV  AARATMV WITVLVLLAFAGNRRRVLVKQGRQIT DVAMYL+AVLVKE
Subjt:  MSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE

Query:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV
        RG +AVAFAAV S +AVVRS EID  SV V
Subjt:  RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03730.1 unknown protein2.5e-0546.48Show/hide
Query:  AVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLAVAFAAVFSLIAVVR
        A A A  A MV WI+V+VLLAF G  RRVLV + R+IT +V  ++  VL+KE G    A  AV     ++R
Subjt:  AVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLAVAFAAVFSLIAVVR

AT4G03600.1 unknown protein4.5e-0747.89Show/hide
Query:  AVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLAVAFAAVFSLIAVVR
        A+  A  A MV WI+V+VLLAF G  RRVLV +GR+IT +V  ++  VL+KE G +  AF AV +   ++R
Subjt:  AVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLAVAFAAVFSLIAVVR

AT4G28330.1 unknown protein4.7e-0438.81Show/hide
Query:  VVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLAVAFA
        V+ +  A+  A  A +V WI+V+V +AFAG  R+ +V +GR++T ++A ++  VL+KE  F+A+  A
Subjt:  VVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKERGFLAVAFA

AT5G50175.1 unknown protein5.2e-1167.92Show/hide
Query:  VAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE
        V + AAARATMV WITVLVLLAF+G RRRVL ++G+ IT DVAM L  VL++E
Subjt:  VAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAAGGCCACATGAAGAACAGAGCAATGTCGACACCGGCGCCGGCGACGGCGGCGACAACGGCGGCGATATTTCTGTTGGTTTCAGGTTTGTGTATTGTGGTTTT
CAATTGTGATTTGATGATGGGGCGATGGGTGCCGATTGTGGGGTTGGTGGTGGTCGTCGGAGTGGCGGTGGCGGCGGCGGCAAGAGCCACCATGGTGACGTGGATCACGG
TGTTGGTGCTGTTGGCGTTCGCCGGAAACCGGCGGCGGGTTTTGGTGAAACAGGGGAGACAGATCACCGGCGATGTAGCTATGTATTTGGCCGCCGTGTTGGTTAAAGAA
AGAGGGTTTCTTGCTGTTGCTTTCGCCGCCGTCTTCAGCCTCATCGCCGTCGTTCGCTCGTCGGAGATCGATCCATTCTCTGTTTTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
AAACAAATTAATGAATTGGAAAGTTGCATAAAAAGCACATATACTCTGACCACATTGTTCTGTAATGCAAAAAGGCCACATGAAGAACAGAGCAATGTCGACACCGGCGC
CGGCGACGGCGGCGACAACGGCGGCGATATTTCTGTTGGTTTCAGGTTTGTGTATTGTGGTTTTCAATTGTGATTTGATGATGGGGCGATGGGTGCCGATTGTGGGGTTG
GTGGTGGTCGTCGGAGTGGCGGTGGCGGCGGCGGCAAGAGCCACCATGGTGACGTGGATCACGGTGTTGGTGCTGTTGGCGTTCGCCGGAAACCGGCGGCGGGTTTTGGT
GAAACAGGGGAGACAGATCACCGGCGATGTAGCTATGTATTTGGCCGCCGTGTTGGTTAAAGAAAGAGGGTTTCTTGCTGTTGCTTTCGCCGCCGTCTTCAGCCTCATCG
CCGTCGTTCGCTCGTCGGAGATCGATCCATTCTCTGTTTTTGTTTAATTTTATTCATTTGTCAAAAAGGGATTGTTTTTCATTCTGGGTTTTGAGCTTTTTGGATATATA
TATAATAATAATAATAAAAAAAAAATTTCCAACCCAATTTTACAGGCTTGGTGAAGGAAGAAAATG
Protein sequenceShow/hide protein sequence
MQKGHMKNRAMSTPAPATAATTAAIFLLVSGLCIVVFNCDLMMGRWVPIVGLVVVVGVAVAAAARATMVTWITVLVLLAFAGNRRRVLVKQGRQITGDVAMYLAAVLVKE
RGFLAVAFAAVFSLIAVVRSSEIDPFSVFV