; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014994 (gene) of Chayote v1 genome

Gene IDSed0014994
OrganismSechium edule (Chayote v1)
DescriptionLOB domain-containing protein
Genome locationLG05:45612942..45614528
RNA-Seq ExpressionSed0014994
SyntenySed0014994
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605396.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia]7.9e-5066.45Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP+DPYKFA+VHK FG+SN++KMLQ LP DQR DA NSMVYEA+ARM+DPVYGCVG I+FL+N + RLEMQLAAAQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT
        AE+LSFQ QQQA   +FP+ QM+Q  Q+LV  SN D+  S+    EVED    W+
Subjt:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT

XP_008463841.1 PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]4.6e-5065.61Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP DP KFA+VHK FG+SN++KMLQ +P DQRADA +SMVYEA+ARMQDPVYGCVG I+FL+N + RLE+QL AAQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQATEVTFP--VAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT
        AE+L+ Q +QQ T  TFP    QMDQD Q+L+ FSN D+S S+  FQ  ED Y  WT
Subjt:  AEMLSFQRQQQATEVTFP--VAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT

XP_022947802.1 LOB domain-containing protein 12-like [Cucurbita moschata]5.1e-4965.81Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP DP+KFA+VHK FG+SN++KMLQ LP DQR DA NSMVYEA+ARM+DPVYGCVG I+FL+N + RLEMQLAAAQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT
        AE+LSFQ QQQA   +FP+ QM+Q  Q+LV  SN D+  S+    EVED    W+
Subjt:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT

XP_023006803.1 LOB domain-containing protein 12-like [Cucurbita maxima]1.0e-4966.45Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP DPYKFA+VHK FG+SN++KMLQ LP DQR DA NSMVYEA+ARM+DPVYGCVG I+FL+N + RLEMQLAAAQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT
        AE+LSFQ QQQA   +FP+ QM+Q  Q+LV  SN D+  S+    EVED    W+
Subjt:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT

XP_023533075.1 LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo]1.3e-4966.45Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP DPYKFA+VHK FG+SN++KMLQ LP DQR DA NSMVYEA+ARM+DPVYGCVG I+FL+N + RLEMQLAAAQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT
        AE+LSFQ QQQA   +FP+ QM+Q  Q+LV  SN D+  S+    EVED    W+
Subjt:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT

TrEMBL top hitse value%identityAlignment
A0A0A0KBK5 LOB domain-containing protein2.3e-4763.92Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPPHDP KFA+VHK FG+SN++KMLQ +P DQRADA +SMVYEA+ARMQDPVYGCVG I FL+N + +LE+QL AA+
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQ-RQQQATEVTFPV--AQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT
        AE+L  Q RQQQ   +TFP+   QMDQD Q+L+  SN D+S S   FQ  +D Y  WT
Subjt:  AEMLSFQ-RQQQATEVTFPV--AQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT

A0A1S3CKM4 LOB domain-containing protein 12-like2.2e-5065.61Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP DP KFA+VHK FG+SN++KMLQ +P DQRADA +SMVYEA+ARMQDPVYGCVG I+FL+N + RLE+QL AAQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQATEVTFP--VAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT
        AE+L+ Q +QQ T  TFP    QMDQD Q+L+ FSN D+S S+  FQ  ED Y  WT
Subjt:  AEMLSFQRQQQATEVTFP--VAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT

A0A6J1FX16 LOB domain-containing protein 12-like isoform X13.5e-4369.35Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRCT+ C+ APYFPP+DP KFA+VHK FG+SN++KMLQ +  DQRAD  +S+VYEANARM+DPVYGCVGIISFL+N + +LEMQLA   
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQATEVTFPVAQMDQ
        AE+LSFQ QQ    +TFP  QMDQ
Subjt:  AEMLSFQRQQQATEVTFPVAQMDQ

A0A6J1G7F7 LOB domain-containing protein 12-like2.5e-4965.81Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP DP+KFA+VHK FG+SN++KMLQ LP DQR DA NSMVYEA+ARM+DPVYGCVG I+FL+N + RLEMQLAAAQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT
        AE+LSFQ QQQA   +FP+ QM+Q  Q+LV  SN D+  S+    EVED    W+
Subjt:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT

A0A6J1L5Y7 LOB domain-containing protein 12-like5.0e-5066.45Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP DPYKFA+VHK FG+SN++KMLQ LP DQR DA NSMVYEA+ARM+DPVYGCVG I+FL+N + RLEMQLAAAQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT
        AE+LSFQ QQQA   +FP+ QM+Q  Q+LV  SN D+  S+    EVED    W+
Subjt:  AEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSN-DNSKSISSFQEVEDCYFQWT

SwissProt top hitse value%identityAlignment
Q8L5T5 LOB domain-containing protein 152.8e-3454.31Show/hide
Query:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE
        PCA+CKLLRRRC + C  +PYF PH+P+KFA VHK FG+SN++KML  +PE QRADAANS+VYEAN R++DPVYGC+G IS L+  +  L+ +L A ++E
Subjt:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE

Query:  MLSFQRQQQATEVTFP
        +L +++++    +  P
Subjt:  MLSFQRQQQATEVTFP

Q8LBW3 LOB domain-containing protein 128.2e-4260.29Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP DP+KFA+VHK FG+SN++KMLQ LP  QRADA NS+V+EANAR++DPVYGCVG IS+L+N + +L+MQLA AQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQAT-EVTFPVAQMDQDYQDLVSFSND
        AE+L  Q Q + T +    V ++DQD++ L+  +N+
Subjt:  AEMLSFQRQQQAT-EVTFPVAQMDQDYQDLVSFSND

Q9LQR0 LOB domain-containing protein 13.9e-3657.04Show/hide
Query:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE
        PCA+CK+LRRRC E CVLAPYFPP DP KF + H+ FG+SNI K LQ LPE QR DA NSMVYEA AR++DPVYGC G I  L+  +  L+ QLA AQ E
Subjt:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE

Query:  MLSFQRQQ-QATEVTFPVAQMDQDYQDLVSF-SND
        M++ Q Q+    E+ + + Q  +  QD +SF SND
Subjt:  MLSFQRQQ-QATEVTFPVAQMDQDYQDLVSF-SND

Q9SA51 LOB domain-containing protein 31.4e-3357.14Show/hide
Query:  PCASCKLLRRRCT-ETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQA
        PCA CKLLRR+C  ++CV APYFP  +PYKFA+VHK FG+SN+ KMLQ L E+ R+DA +SMVYEANAR+QDPVYGCVG IS L   +  L+ QLA AQA
Subjt:  PCASCKLLRRRCT-ETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQA

Query:  EMLSFQRQQQ---------ATEVTFP
        E++  +   +         A+ VTFP
Subjt:  EMLSFQRQQQ---------ATEVTFP

Q9SK08 LOB domain-containing protein 114.8e-3460Show/hide
Query:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE
        PCA+CK+LRRRC + CVLAPYFPP DP KF + H+ FG+SNI K LQ LPE QR DA NSMVYEA ARM+DPVYGC G I  L+  +  L+ QLA  Q E
Subjt:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE

Query:  MLSFQRQQQA
        ++  Q Q+ +
Subjt:  MLSFQRQQQA

Arabidopsis top hitse value%identityAlignment
AT1G07900.1 LOB domain-containing protein 12.8e-3757.04Show/hide
Query:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE
        PCA+CK+LRRRC E CVLAPYFPP DP KF + H+ FG+SNI K LQ LPE QR DA NSMVYEA AR++DPVYGC G I  L+  +  L+ QLA AQ E
Subjt:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE

Query:  MLSFQRQQ-QATEVTFPVAQMDQDYQDLVSF-SND
        M++ Q Q+    E+ + + Q  +  QD +SF SND
Subjt:  MLSFQRQQ-QATEVTFPVAQMDQDYQDLVSF-SND

AT1G16530.1 ASYMMETRIC LEAVES 2-like 91.0e-3457.14Show/hide
Query:  PCASCKLLRRRCT-ETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQA
        PCA CKLLRR+C  ++CV APYFP  +PYKFA+VHK FG+SN+ KMLQ L E+ R+DA +SMVYEANAR+QDPVYGCVG IS L   +  L+ QLA AQA
Subjt:  PCASCKLLRRRCT-ETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQA

Query:  EMLSFQRQQQ---------ATEVTFP
        E++  +   +         A+ VTFP
Subjt:  EMLSFQRQQQ---------ATEVTFP

AT2G28500.1 LOB domain-containing protein 113.4e-3560Show/hide
Query:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE
        PCA+CK+LRRRC + CVLAPYFPP DP KF + H+ FG+SNI K LQ LPE QR DA NSMVYEA ARM+DPVYGC G I  L+  +  L+ QLA  Q E
Subjt:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE

Query:  MLSFQRQQQA
        ++  Q Q+ +
Subjt:  MLSFQRQQQA

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein5.8e-4360.29Show/hide
Query:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ
        S PCASCKLLRRRC + C+ APYFPP DP+KFA+VHK FG+SN++KMLQ LP  QRADA NS+V+EANAR++DPVYGCVG IS+L+N + +L+MQLA AQ
Subjt:  SWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQ

Query:  AEMLSFQRQQQAT-EVTFPVAQMDQDYQDLVSFSND
        AE+L  Q Q + T +    V ++DQD++ L+  +N+
Subjt:  AEMLSFQRQQQAT-EVTFPVAQMDQDYQDLVSFSND

AT2G40470.1 LOB domain-containing protein 152.0e-3554.31Show/hide
Query:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE
        PCA+CKLLRRRC + C  +PYF PH+P+KFA VHK FG+SN++KML  +PE QRADAANS+VYEAN R++DPVYGC+G IS L+  +  L+ +L A ++E
Subjt:  PCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAE

Query:  MLSFQRQQQATEVTFP
        +L +++++    +  P
Subjt:  MLSFQRQQQATEVTFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGTGGTTGGTCATGGCCATGTGCGTCGTGCAAATTGCTGCGGCGGCGGTGCACAGAGACGTGCGTTTTGGCTCCTTATTTTCCTCCCCATGACCCTTACAAGTT
CGCCGTTGTTCACAAGTTCTTTGGCTCTAGCAATATCACCAAAATGTTACAGGCGCTTCCCGAAGATCAAAGAGCGGATGCAGCAAACAGTATGGTATATGAAGCGAATG
CGAGAATGCAAGATCCAGTGTATGGTTGCGTCGGTATAATCTCGTTCCTACGCAACCATATTTTCCGATTAGAAATGCAGTTGGCAGCAGCACAAGCAGAGATGTTAAGC
TTTCAAAGGCAGCAACAAGCAACTGAAGTAACATTTCCAGTGGCACAAATGGACCAAGATTATCAAGATCTTGTTTCTTTCTCAAATGACAATTCTAAGTCCATCAGTAG
TTTCCAAGAAGTGGAAGATTGTTACTTTCAATGGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGTGGTTGGTCATGGCCATGTGCGTCGTGCAAATTGCTGCGGCGGCGGTGCACAGAGACGTGCGTTTTGGCTCCTTATTTTCCTCCCCATGACCCTTACAAGTT
CGCCGTTGTTCACAAGTTCTTTGGCTCTAGCAATATCACCAAAATGTTACAGGCGCTTCCCGAAGATCAAAGAGCGGATGCAGCAAACAGTATGGTATATGAAGCGAATG
CGAGAATGCAAGATCCAGTGTATGGTTGCGTCGGTATAATCTCGTTCCTACGCAACCATATTTTCCGATTAGAAATGCAGTTGGCAGCAGCACAAGCAGAGATGTTAAGC
TTTCAAAGGCAGCAACAAGCAACTGAAGTAACATTTCCAGTGGCACAAATGGACCAAGATTATCAAGATCTTGTTTCTTTCTCAAATGACAATTCTAAGTCCATCAGTAG
TTTCCAAGAAGTGGAAGATTGTTACTTTCAATGGACTTAA
Protein sequenceShow/hide protein sequence
MRSGWSWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAEMLS
FQRQQQATEVTFPVAQMDQDYQDLVSFSNDNSKSISSFQEVEDCYFQWT