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Sed0014997 (gene) of Chayote v1 genome

Gene IDSed0014997
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationLG01:66212114..66216088
RNA-Seq ExpressionSed0014997
SyntenySed0014997
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605657.1 ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3465.55Show/hide
Query:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFG-PSAQHSPVPNDPSAAVRAREE
        MAAAS LII AR R A    PL    LSP +FT R GHW++YEKN EEE+CPT+VPDHM+H LSE+YWAPHPQTGVFG P+ QH+PVP+D S      +E
Subjt:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFG-PSAQHSPVPNDPSAAVRAREE

Query:  GSILDLKVWFRHNGLEDPE
        GS+L+LKVWFRH  LEDPE
Subjt:  GSILDLKVWFRHNGLEDPE
XP_022957877.1 late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]1.7e-3367.24Show/hide
Query:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE
        MAAAS LII AR R A L  PL    LSP +FT R GHW++YEKN EEE+CPT+VPDHMIH LSE+YWAPHPQTGVFGP   QH+PVP+D SA     +E
Subjt:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE

Query:  GSILDLKVWFRHNGLE
        GS+L+LKVWFRH  LE
Subjt:  GSILDLKVWFRHNGLE
XP_022995249.1 late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]4.1e-3566.39Show/hide
Query:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE
        MAAAS LII AR R A L  P+    LSP +FT R GHW++YEKN EEE+CPT+VPDHMIH +SE+YWAPHPQTGVFGP  +QH+PVP+D SA     +E
Subjt:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE

Query:  GSILDLKVWFRHNGLEDPE
        GS+L+LKVWFRH  LEDPE
Subjt:  GSILDLKVWFRHNGLEDPE
XP_023532525.1 late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]2.4e-3567.23Show/hide
Query:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE
        MAAAS LII AR R A L  PL    LSP +FT R GHW++YEKN EEE+CPT+VPDHMIH +SE+YWAPHPQTGVFGP   QH+PVP+D SA     +E
Subjt:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE

Query:  GSILDLKVWFRHNGLEDPE
        GS+L+LKVWFRH  LEDPE
Subjt:  GSILDLKVWFRHNGLEDPE
XP_038875585.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]1.7e-2556.91Show/hide
Query:  AASKLIIIARRRFADLGKP--LPFSSLSP--VFTRRTGHWASYEKNLEEEICPTIVPDHMIHP-LSENYWAPHPQTGVFGPSAQH---SPVPNDPSAAVR
        A+S  IIIA  RF     P  L  S L P   F  R  HW++YEKN EE+I PT+VPDH+IH  +SENYWAPHP+TGVFGP   H   S VPND SA   
Subjt:  AASKLIIIARRRFADLGKP--LPFSSLSP--VFTRRTGHWASYEKNLEEEICPTIVPDHMIHP-LSENYWAPHPQTGVFGPSAQH---SPVPNDPSAAVR

Query:  AREEGSILDLKVWFRHNGLEDPE
          +E S+LD+K WFRHNGLED E
Subjt:  AREEGSILDLKVWFRHNGLEDPE
TrEMBL top hitse value%identityAlignment
A0A0A0KRJ5 Uncharacterized protein1.6e-2452.85Show/hide
Query:  MAAASKLIIIARRRFADLGKPLPFSSLSPV--FTRRTGHWASYEKNLEEEICPTIVPDHMI-HPLSENYWAPHPQTGVFGPSAQH---SPVPNDPSAAVR
        MA +SK+I+ A      L   LP + L P   F  R+ HW++YEKN E++I PT+VP+H+I   LSE+YW PHP+TGVFGP   H   S VPND SA   
Subjt:  MAAASKLIIIARRRFADLGKPLPFSSLSPV--FTRRTGHWASYEKNLEEEICPTIVPDHMI-HPLSENYWAPHPQTGVFGPSAQH---SPVPNDPSAAVR

Query:  AREEGSILDLKVWFRHNGLEDPE
           EGS+L+LK WFRHNGLED E
Subjt:  AREEGSILDLKVWFRHNGLEDPE
A0A5A7UIY1 Uncharacterized protein5.6e-2250Show/hide
Query:  MAAASKLIIIARRRFADLGKPLPFSSLSPVFT-----RRTGHWASYEKNLEEEICPTIVPDHMI-HPLSENYWAPHPQTGVFGPSAQH---SPVPNDPSA
        MA +SK+I++A    A     L  S    +F       R  HW++YEKN E+ I PT+VP+ +I H LS+NYW PHPQTGVFGP   H   S +PND SA
Subjt:  MAAASKLIIIARRRFADLGKPLPFSSLSPVFT-----RRTGHWASYEKNLEEEICPTIVPDHMI-HPLSENYWAPHPQTGVFGPSAQH---SPVPNDPSA

Query:  AVRAREEGSILDLKVWFRHNGLEDPE
             E GS+L+LK WFRHNGLED E
Subjt:  AVRAREEGSILDLKVWFRHNGLEDPE
A0A6J1E0C6 late embryogenesis abundant protein At5g17165-like5.0e-2351.91Show/hide
Query:  MAAASKLIIIARRRFADLGKP-----LPFSSLSPVFT-RRTGHWA----SYEKNLE-EEICPTIVPDHMIH-----PLSENYWAPHPQTGVFGPSAQHSP
        MAAA+   I   RR AD GK       P SSLS   + RR GHW+    +YEKN E +E+CPT+VPDH+I        ++NYWAPHPQTGVFGP A H+ 
Subjt:  MAAASKLIIIARRRFADLGKP-----LPFSSLSPVFT-RRTGHWA----SYEKNLE-EEICPTIVPDHMIH-----PLSENYWAPHPQTGVFGPSAQHSP

Query:  VPNDPSAAVRAREEGSILDLKVWFRHNGLED
           D S +  A +EGS+LDLK WFRH  LED
Subjt:  VPNDPSAAVRAREEGSILDLKVWFRHNGLED
A0A6J1H0D3 late embryogenesis abundant protein At5g17165-like8.3e-3467.24Show/hide
Query:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE
        MAAAS LII AR R A L  PL    LSP +FT R GHW++YEKN EEE+CPT+VPDHMIH LSE+YWAPHPQTGVFGP   QH+PVP+D SA     +E
Subjt:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE

Query:  GSILDLKVWFRHNGLE
        GS+L+LKVWFRH  LE
Subjt:  GSILDLKVWFRHNGLE
A0A6J1K564 late embryogenesis abundant protein At5g17165-like2.0e-3566.39Show/hide
Query:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE
        MAAAS LII AR R A L  P+    LSP +FT R GHW++YEKN EEE+CPT+VPDHMIH +SE+YWAPHPQTGVFGP  +QH+PVP+D SA     +E
Subjt:  MAAASKLIIIARRRFADLGKPLPFSSLSP-VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREE

Query:  GSILDLKVWFRHNGLEDPE
        GS+L+LKVWFRH  LEDPE
Subjt:  GSILDLKVWFRHNGLEDPE
SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171652.8e-1847.67Show/hide
Query:  VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPSAQHSPVPNDPSAAVRAREEGSILDLKVWFRHNGLED
        +FT R  H ++Y+KN+EEE+ P+ VPD MI P S+ YW+PHPQTGVFGPS+  +   ++     R  +E S+++ K WFR   LED
Subjt:  VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPSAQHSPVPNDPSAAVRAREEGSILDLKVWFRHNGLED
Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein5.3e-1743.62Show/hide
Query:  SSLSPVFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREEGSILDLKVWFRHNGLEDPE
        S+L P  +RR+GH ++Y+KN+E+E+  + VPD +I P S+ YW+PHP+TGVFGPS  +HS      + A  A ++ ++L+   WFR   LED +
Subjt:  SSLSPVFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPS-AQHSPVPNDPSAAVRAREEGSILDLKVWFRHNGLEDPE
AT5G17165.1 unknown protein2.0e-1947.67Show/hide
Query:  VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPSAQHSPVPNDPSAAVRAREEGSILDLKVWFRHNGLED
        +FT R  H ++Y+KN+EEE+ P+ VPD MI P S+ YW+PHPQTGVFGPS+  +   ++     R  +E S+++ K WFR   LED
Subjt:  VFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPSAQHSPVPNDPSAAVRAREEGSILDLKVWFRHNGLED

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCTTCCAAGCTCATTATAATTGCTCGACGACGATTCGCCGATTTGGGGAAGCCGCTCCCTTTTTCGTCTCTTTCTCCTGTTTTCACCCGCCGGACAGGTCA
TTGGGCATCATATGAGAAGAATCTAGAGGAGGAAATCTGCCCAACGATAGTACCAGATCATATGATCCACCCTCTATCTGAAAACTATTGGGCTCCACATCCTCAAACTG
GAGTTTTTGGGCCGTCGGCCCAACACAGCCCGGTTCCGAACGACCCTTCGGCTGCTGTTCGTGCTCGTGAAGAGGGCTCAATTTTGGACCTCAAGGTTTGGTTCCGACAC
AACGGCCTCGAGGACCCTGAGATGTGA
mRNA sequenceShow/hide mRNA sequence
CATATTTTCCATTGCATGGCCGCCGCTTCCAAGCTCATTATAATTGCTCGACGACGATTCGCCGATTTGGGGAAGCCGCTCCCTTTTTCGTCTCTTTCTCCTGTTTTCAC
CCGCCGGACAGGTCATTGGGCATCATATGAGAAGAATCTAGAGGAGGAAATCTGCCCAACGATAGTACCAGATCATATGATCCACCCTCTATCTGAAAACTATTGGGCTC
CACATCCTCAAACTGGAGTTTTTGGGCCGTCGGCCCAACACAGCCCGGTTCCGAACGACCCTTCGGCTGCTGTTCGTGCTCGTGAAGAGGGCTCAATTTTGGACCTCAAG
GTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGATGTGAGAAAACCACACTTTATGCTATATCTTCGCGTATGATAATAAGATAAAGAAGTAAAAATCATAATACAT
GTAATAATATAATAAGCTTAACATGCTGAGCATTAAGAAGAACTTTATGTCTATGTTGTATTATGAATATGTTAATGTTGTGTATTTGGATTGAGGGTTGTGCTTTCTAA
TGAATATTCCAAAGTTGTGTGTGAAATTTAGAAATTTGG
Protein sequenceShow/hide protein sequence
MAAASKLIIIARRRFADLGKPLPFSSLSPVFTRRTGHWASYEKNLEEEICPTIVPDHMIHPLSENYWAPHPQTGVFGPSAQHSPVPNDPSAAVRAREEGSILDLKVWFRH
NGLEDPEM