CuGenDBv2

Gene ID	Sed0014998
Organism	Sechium edule (Chayote v1)
Description	Dynein beta chain, ciliary protein
Genome location	LG09:1845853..1850021
RNA-Seq Expression	Sed0014998
Synteny	Sed0014998
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7013632.1 hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-76

82.8

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Query:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI
        MGQAFRRAAGRIKPASS+DS+ASS+KME+VVDRK PPRAA    ESG  DSG V G+N  NVLEERD QFDAML QM GRI+SKPGGKLEMGEASVVER 
Subjt:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI

Query:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK
        DRPMP+LRNTDLKSSKYEDRPAP GTLNVAQMR IILLHEGKA+DHDGPM V+QIAERYNV VAQI+TI QFLSLPPEDSL++KKK
Subjt:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK

XP_011657169.1 uncharacterized protein LOC101223121 [Cucumis sativus]

2.4e-74

80.85

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Query:  MGQAFRRAAGRIKPASSVDS-AASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS  ASS+KME++VDRK PPR A    ESG  DSG V  ++ GN+LEERD QFDAML QMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDS-AASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVER

Query:  IDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKKD
          RPMPKLR+T++ SSKYEDRPAP GTLNVAQMRQIILLHEGKADDHDGPM +HQIAERYNVSVAQIQTI QFLSLPPEDSL++K KD
Subjt:  IDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKKD

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]

4.3e-76

82.26

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Query:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI
        MGQAFRRAAGRIKPASS+DS+ASS+KME+VVDRK PPRAA    ESG  DSG V G+N  NVLEERD QFDAML QM GRI+SKPGGKLEMGEASVVER 
Subjt:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI

Query:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK
        DRPMP+LRNTDLKSSKYEDRPAP GTLNVAQMR I+LLHEGKA+DHDGPM V+QIAERYNV VAQI+TI QFLSLPPEDSL++KKK
Subjt:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]

3.0e-77

83.33

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Query:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI
        MGQAFRRAAGRIKPASS+DS+ASS+KME+VVDRK PPRAA    ESG  DSG V G+N GNVLEERD QFDAML QM GRI+SKPGGKLEMGEASVVER 
Subjt:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI

Query:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK
        +RPMPKLRNTDLKSSKYEDRPAP GTLNVAQMR IILLHEGKADDHDGPM V+QIAERYNV V+QI+TI QFLSLPPEDSL++KKK
Subjt:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK

XP_023547640.1 uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo]

3.7e-75

81.72

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Query:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI
        MGQAFRRAAGRIKPASS+DS+ASS+KME+VVDRK PPRA     ESG  DSG   G+N  NVLEERD QFDAML QM GRI+SKPGGKLEMGEASVVER 
Subjt:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI

Query:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK
        DRPMP+LRNTDLKSSKYEDRPAP GTLNVAQMR IILLHEGKA+DHDGPM V+QIAERYNV VAQI+TI QFLSLPPEDSL++KKK
Subjt:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCC5 Uncharacterized protein

1.2e-74

80.85

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Query:  MGQAFRRAAGRIKPASSVDS-AASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS  ASS+KME++VDRK PPR A    ESG  DSG V  ++ GN+LEERD QFDAML QMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDS-AASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVER

Query:  IDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKKD
          RPMPKLR+T++ SSKYEDRPAP GTLNVAQMRQIILLHEGKADDHDGPM +HQIAERYNVSVAQIQTI QFLSLPPEDSL++K KD
Subjt:  IDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKKD

A0A1S3C957 uncharacterized protein LOC103497865 isoform X1

4.4e-74

81.38

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Query:  MGQAFRRAAGRIKPASSVDS-AASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSVDS  ASS+KME++VDRK PPR A    ESG  DSG V+ ++ GN LEERD QFDAML QMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSVDS-AASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVER

Query:  IDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKKD
          RPMPKLR+T++KSSKYEDRPAP GTLNVAQMRQIILLHEGKADDHDGPM  HQIAERYNVSVAQIQTI QFLSLPPEDSL++K  D
Subjt:  IDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKKD

A0A6J1C9H1 uncharacterized protein LOC111009550

2.4e-72

76.04

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Query:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRA---------AESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEAS
        MGQAFRRAAGRIKPASS+DS ASS+KME+VVDR+ PPRA          ESG  DSGG+ G+N  NV EERD QFDAMLGQMVGRIKSKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRA---------AESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEAS

Query:  VVERIDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKKD
        VVER +RPMPKLRNTD+KSS+YEDRPAP GTLNVAQMR +I LHEGKA+DH+G MAV QIA+RYNVSV QI TI QFLSLPPED+L+ K KD
Subjt:  VVERIDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKKD

A0A6J1H4J6 uncharacterized protein LOC111459975

2.1e-76

82.26

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Query:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI
        MGQAFRRAAGRIKPASS+DS+ASS+KME+VVDRK PPRAA    ESG  DSG V G+N  NVLEERD QFDAML QM GRI+SKPGGKLEMGEASVVER 
Subjt:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI

Query:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK
        DRPMP+LRNTDLKSSKYEDRPAP GTLNVAQMR I+LLHEGKA+DHDGPM V+QIAERYNV VAQI+TI QFLSLPPEDSL++KKK
Subjt:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK

A0A6J1L288 uncharacterized protein LOC111499180

1.5e-77

83.33

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Query:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI
        MGQAFRRAAGRIKPASS+DS+ASS+KME+VVDRK PPRAA    ESG  DSG V G+N GNVLEERD QFDAML QM GRI+SKPGGKLEMGEASVVER 
Subjt:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAA----ESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERI

Query:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK
        +RPMPKLRNTDLKSSKYEDRPAP GTLNVAQMR IILLHEGKADDHDGPM V+QIAERYNV V+QI+TI QFLSLPPEDSL++KKK
Subjt:  DRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G21400.1 unknown protein

4.2e-45

51.6

Show/hide

Query:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKV------PPRAAESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVE
        MGQ  RRA G+IK       +  S+   ++   ++      P  AA  G  D G  +  +  NVLEERD ++D ML QMVGRIK+KPGGK EMGEASVVE
Subjt:  MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKV------PPRAAESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVE

Query:  RIDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK
           RP+PKLRNT  +S++YE+ P P+GTLNVAQ+R I+LL +GK+ DH GPM V++IAE+Y + V+Q+Q I QFLSLP E + K+KK+
Subjt:  RIDRPMPKLRNTDLKSSKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAGCCGGCTTCCAGCGTGGATTCCGCCGCCTCTTCGGTGAAAATGGAGACCGTCGTTGATCGGAAGGTTCCGCC
GCGTGCGGCGGAGAGCGGCGGTTTTGATTCTGGTGGTGTCTCGGGAAATAACTTCGGAAATGTGCTTGAAGAACGAGATTCACAATTTGACGCCATGCTTGGTCAAATGG
TGGGTCGAATTAAGTCAAAGCCGGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGGATCGACAGACCAATGCCAAAGCTAAGAAACACGGATCTAAAATCG
AGCAAATACGAGGATCGCCCAGCCCCACGAGGAACTTTAAACGTAGCACAAATGCGCCAAATAATTCTCCTACACGAAGGAAAGGCCGATGATCACGACGGGCCAATGGC
AGTTCATCAAATTGCTGAAAGGTACAACGTGAGTGTTGCTCAAATACAGACCATTTTCCAGTTTCTGTCTTTGCCTCCAGAGGACAGTCTTAAAGAGAAAAAGAAGGATT
ATTAA

mRNA sequence

Show/hide mRNA sequence

AGTTTCTAACTCAGTAAAAAACCGACTCACCGATCCGTCAAATTTCATCTCCATTTTCACCTGAAAATTTGTCCATAAACCCTCCCACAATTCGTAGGGTTCTTGAATCT
CGATCCATTTCGCTGGTTCTGTGACGAATTTCGTATGAATCTGAATCTCCGATTCCAGTTTGTTCTCTGAGATCGTTGATCGTTTGGAATTCAACGGAAGCGATGGGACA
GGCATTTCGTCGAGCGGCTGGAAGAATCAAGCCGGCTTCCAGCGTGGATTCCGCCGCCTCTTCGGTGAAAATGGAGACCGTCGTTGATCGGAAGGTTCCGCCGCGTGCGG
CGGAGAGCGGCGGTTTTGATTCTGGTGGTGTCTCGGGAAATAACTTCGGAAATGTGCTTGAAGAACGAGATTCACAATTTGACGCCATGCTTGGTCAAATGGTGGGTCGA
ATTAAGTCAAAGCCGGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGGATCGACAGACCAATGCCAAAGCTAAGAAACACGGATCTAAAATCGAGCAAATA
CGAGGATCGCCCAGCCCCACGAGGAACTTTAAACGTAGCACAAATGCGCCAAATAATTCTCCTACACGAAGGAAAGGCCGATGATCACGACGGGCCAATGGCAGTTCATC
AAATTGCTGAAAGGTACAACGTGAGTGTTGCTCAAATACAGACCATTTTCCAGTTTCTGTCTTTGCCTCCAGAGGACAGTCTTAAAGAGAAAAAGAAGGATTATTAATCA
TTTTTTTTGGGACTGACCATTAGATTGGGGTTTTTGTGTACTAAAATTTGAATGTTGTTTTTTTTTTAACATGTTGAAACTACTTTCAGGAATGGAGCCAAGAAATCAAA
AGAAGGGCAGTTGCCCTAAGATGAATCAAAATAAAGGTTTTAAAAATTTTCTGC

Protein sequence

Show/hide protein sequence

MGQAFRRAAGRIKPASSVDSAASSVKMETVVDRKVPPRAAESGGFDSGGVSGNNFGNVLEERDSQFDAMLGQMVGRIKSKPGGKLEMGEASVVERIDRPMPKLRNTDLKS
SKYEDRPAPRGTLNVAQMRQIILLHEGKADDHDGPMAVHQIAERYNVSVAQIQTIFQFLSLPPEDSLKEKKKDY

Sed0014998 (gene) of Chayote v1 genome