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Sed0015002 (gene) of Chayote v1 genome

Gene IDSed0015002
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF1639)
Genome locationLG11:31708076..31709968
RNA-Seq ExpressionSed0015002
SyntenySed0015002
Gene Ontology termsNA
InterPro domainsIPR012438 - Protein of unknown function DUF1639


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8688012.1 Detected protein of unknown function [Hibiscus syriacus]5.0e-0838.78Show/hide
Query:  PWNLRDRNRIYR-------PKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE
        PWNLR R    +          + +    +  + K P  KF+VSLS+ EI +DF+ +TG  PPS+PKKR R +Q+ LD++  G  L+++S+D Y V E
Subjt:  PWNLRDRNRIYR-------PKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE

XP_021723407.1 uncharacterized protein LOC110690834 [Chenopodium quinoa]8.4e-0842.99Show/hide
Query:  PEPVPPPRPSSVPWNLRDRNR----IYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSS
        P   PPP P   PWNLR R         P  + AE   S ++      KF+V LS +EI  DF++MTG  PP KPKKR R +QR LDT+  G  L+++S 
Subjt:  PEPVPPPRPSSVPWNLRDRNR----IYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSS

Query:  DRYHVFE
        + Y V E
Subjt:  DRYHVFE

XP_038875002.1 uncharacterized protein LOC120067524 [Benincasa hispida]2.1e-1137.93Show/hide
Query:  NKEKMKKKSYGDLKTLILKWGNHKHRIPISLDP-----PASSPEPEPVPPPRPSS--------VPWNLRDRNR-----IYRPKKLVA-------------
        NKEK         K L+LKWGNH+HRI I+ D      PAS  E  P+P P+  S        +P  LR R R     +   +K ++             
Subjt:  NKEKMKKKSYGDLKTLILKWGNHKHRIPISLDP-----PASSPEPEPVPPPRPSS--------VPWNLRDRNR-----IYRPKKLVA-------------

Query:  ---ETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHV
             R+  +  KEPMLK AV LS+S+I +DFLKM G  PPS+PKKR R  Q+  D+   G  L ++ +DRY V
Subjt:  ---ETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHV

XP_039018211.1 uncharacterized protein LOC120149520 [Hibiscus syriacus]5.0e-0838.78Show/hide
Query:  PWNLRDRNRIYR-------PKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE
        PWNLR R    +          + +    +  + K P  KF+VSLS+ EI +DF+ +TG  PPS+PKKR R +Q+ LD++  G  L+++S+D Y V E
Subjt:  PWNLRDRNRIYR-------PKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE

XP_039058146.1 uncharacterized protein LOC120201642 [Hibiscus syriacus]1.0e-0840.38Show/hide
Query:  PWNLRDR-------------NRIYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRY
        PWNLR R             N IY     +A + T+  + K P  KF+VSLS+ EI +DF+ +TG  PP +PKKR R +Q+ LD++  G  L+++S D Y
Subjt:  PWNLRDR-------------NRIYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRY

Query:  HVFE
         V E
Subjt:  HVFE

TrEMBL top hitse value%identityAlignment
A0A0L9TIU8 Uncharacterized protein5.3e-0839.81Show/hide
Query:  PSSVPWNLRDRNRIYRP-------KKLVAETRTSTLNTK-EPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYH
        P+S PWNLR R    +          L  E +     TK E   KF+VSL++ E+  DF  + GT PP +PKKR R IQ+NLDT+  G  L++++++ Y 
Subjt:  PSSVPWNLRDRNRIYRP-------KKLVAETRTSTLNTK-EPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYH

Query:  VFE
        V E
Subjt:  VFE

A0A6A2ZAG5 Uncharacterized protein2.4e-0838.78Show/hide
Query:  PWNLRDRNRIYR-------PKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE
        PWNLR R    +          + +    +  + K P  KF+VSLS+ EI +DF+ +TG  PPS+PKKR R +Q+ LD++  G  L+++S+D Y V E
Subjt:  PWNLRDRNRIYR-------PKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE

A0A7C9DKN9 Uncharacterized protein4.0e-1139.52Show/hide
Query:  PASSPEPEPVPPPRPSSV-PWNLRDRNRIYRPKKLVAET---RTSTLNTKEP-----------MLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQ
        P+S P P P PPP P+   PWNLRDR    +   + +++   +T+ +    P             KF+V+LS+ EI  DF+KM G  PP KPKKR R +Q
Subjt:  PASSPEPEPVPPPRPSSV-PWNLRDRNRIYRPKKLVAET---RTSTLNTKEP-----------MLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQ

Query:  RNLDTMNFGHDLADLSSDRYHVFE
        R LDT+  G  L+++++D Y V E
Subjt:  RNLDTMNFGHDLADLSSDRYHVFE

A0A7C9DN95 Uncharacterized protein2.2e-0937.5Show/hide
Query:  SPEPEPVPPPRPSSVPWNLRDRNRIYRPKKLVAET---RTSTLNTKEP-----------MLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLD
        +P   P PPP   + PWNLRDR    +   + +++   +T+ +    P             KF+V+LS+ EI  DF+KM G  PP KPKKR R +QR LD
Subjt:  SPEPEPVPPPRPSSVPWNLRDRNRIYRPKKLVAET---RTSTLNTKEP-----------MLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLD

Query:  TMNFGHDLADLSSDRYHVFE
        T+  G  L+++++D Y V E
Subjt:  TMNFGHDLADLSSDRYHVFE

A0A803MPL6 Uncharacterized protein4.1e-0842.99Show/hide
Query:  PEPVPPPRPSSVPWNLRDRNR----IYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSS
        P   PPP P S PWNLR R         P  +  E   S         KF+V LS +EI  DF++MTG  PP KPKKR R +QR LDT+  G  L+++S 
Subjt:  PEPVPPPRPSSVPWNLRDRNR----IYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSS

Query:  DRYHVFE
        + Y V E
Subjt:  DRYHVFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68340.1 Protein of unknown function (DUF1639)2.0e-0728.71Show/hide
Query:  PWNLRDRNRIYRPKKLVA-----ETRTSTLNTK-------EPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYH
        PWNLR R    +    +      + + S +N         +   +   +LS+ EI +D++ M G  PP +PKKR R +Q+ +D +NF   + +++ D Y+
Subjt:  PWNLRDRNRIYRPKKLVA-----ETRTSTLNTK-------EPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYH

Query:  V
        V
Subjt:  V

AT3G18295.1 Protein of unknown function (DUF1639)2.2e-0640.58Show/hide
Query:  KEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLA-DLSSDRYHVFEPFPT
        K   +KF+VSL   EI +DF  + G  PP +PKKR R +Q+ ++T+  G  LA ++++D Y V E   T
Subjt:  KEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLA-DLSSDRYHVFEPFPT

AT3G60410.1 Protein of unknown function (DUF1639)1.0e-0631.46Show/hide
Query:  NLRDRNRIYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE
        ++R RN +        + + +T   KE   + ++SLS+ EI +D   +TG+ P  +PKKR + +Q+ LD +  G  + ++SS+ Y V E
Subjt:  NLRDRNRIYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE

AT3G60410.2 Protein of unknown function (DUF1639)1.0e-0631.46Show/hide
Query:  NLRDRNRIYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE
        ++R RN +        + + +T   KE   + ++SLS+ EI +D   +TG+ P  +PKKR + +Q+ LD +  G  + ++SS+ Y V E
Subjt:  NLRDRNRIYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE

AT3G60410.3 Protein of unknown function (DUF1639)1.0e-0631.46Show/hide
Query:  NLRDRNRIYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE
        ++R RN +        + + +T   KE   + ++SLS+ EI +D   +TG+ P  +PKKR + +Q+ LD +  G  + ++SS+ Y V E
Subjt:  NLRDRNRIYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLKMTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCAAAAGGATTTAGCCGCAGATCACAACAAAGAGAAGATGAAGAAGAAGAGTTATGGTGATCTGAAGACATTGATTTTGAAGTGGGGAAACCATAAACACCGAAT
CCCTATTAGCCTTGACCCTCCAGCTTCTTCGCCCGAGCCCGAGCCAGTGCCGCCTCCACGTCCTTCATCAGTGCCTTGGAATCTAAGGGATCGAAATAGAATTTATCGTC
CGAAGAAACTAGTGGCGGAAACGAGGACTTCCACACTGAACACGAAGGAGCCGATGCTCAAGTTTGCGGTGTCGTTGTCGGAATCGGAGATCGTGAAAGATTTCTTAAAG
ATGACTGGGACGATGCCCCCATCCAAACCCAAGAAGAGAGTTAGAGCTATTCAGCGAAACCTAGATACTATGAATTTTGGACATGATTTGGCCGACCTTTCAAGTGATAG
ATACCATGTTTTTGAACCATTCCCTACCATAAACAAGGTAATTATTTCAAATATAATCTCATGTTTTCTTAAGTTTTTTTACAAGAATTTTATCATCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGCAAAAGGATTTAGCCGCAGATCACAACAAAGAGAAGATGAAGAAGAAGAGTTATGGTGATCTGAAGACATTGATTTTGAAGTGGGGAAACCATAAACACCGAAT
CCCTATTAGCCTTGACCCTCCAGCTTCTTCGCCCGAGCCCGAGCCAGTGCCGCCTCCACGTCCTTCATCAGTGCCTTGGAATCTAAGGGATCGAAATAGAATTTATCGTC
CGAAGAAACTAGTGGCGGAAACGAGGACTTCCACACTGAACACGAAGGAGCCGATGCTCAAGTTTGCGGTGTCGTTGTCGGAATCGGAGATCGTGAAAGATTTCTTAAAG
ATGACTGGGACGATGCCCCCATCCAAACCCAAGAAGAGAGTTAGAGCTATTCAGCGAAACCTAGATACTATGAATTTTGGACATGATTTGGCCGACCTTTCAAGTGATAG
ATACCATGTTTTTGAACCATTCCCTACCATAAACAAGGTAATTATTTCAAATATAATCTCATGTTTTCTTAAGTTTTTTTACAAGAATTTTATCATCTTTTAA
Protein sequenceShow/hide protein sequence
MTQKDLAADHNKEKMKKKSYGDLKTLILKWGNHKHRIPISLDPPASSPEPEPVPPPRPSSVPWNLRDRNRIYRPKKLVAETRTSTLNTKEPMLKFAVSLSESEIVKDFLK
MTGTMPPSKPKKRVRAIQRNLDTMNFGHDLADLSSDRYHVFEPFPTINKVIISNIISCFLKFFYKNFIIF