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Sed0015018 (gene) of Chayote v1 genome

Gene IDSed0015018
OrganismSechium edule (Chayote v1)
DescriptionNodulin-like / Major Facilitator Superfamily protein
Genome locationLG10:8679342..8686923
RNA-Seq ExpressionSed0015018
SyntenySed0015018
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsIPR010658 - Nodulin-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587515.1 Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3075.26Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        IGATAG LAGLLYSAVVS   P RPWIVL+VGA++  LGY+FI A VS   P    + MC FMFLAVHAQVFFNTANVVTGVHNFQLYGGTI+GILK
Subjt:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK

KAG7021495.1 Protein NUCLEAR FUSION DEFECTIVE 4 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3075.26Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        IGATAG LAGLLYSAVVS   P RPWIVL+VGA++  LGY+FI A VS   P    + MC FMFLAVHAQVFFNTANVVTGVHNFQLYGGTI+GILK
Subjt:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK

XP_022933362.1 uncharacterized protein LOC111440723 [Cucurbita moschata]2.4e-3177.32Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        IGATAG LAGLLYSAVVS   PRRPWIVL+VGA++  LGY+FI A VS   P    +AMC FMFLAVHAQVFFNTANVVTGVHNFQLYGGTI+GILK
Subjt:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK

XP_022973033.1 uncharacterized protein LOC111471542 [Cucurbita maxima]6.6e-2975.26Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        IGATAG LAGLL SAVVS   PR PWIVL+VGA++  LGY+FI A VS   P     AMC FMFLAVHAQVFFNTANVVTGVHNFQLYGGTI+GILK
Subjt:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK

XP_023530984.1 uncharacterized protein LOC111793373 [Cucurbita pepo subsp. pepo]7.0e-3176.29Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        IGA+AG LAGLLYSAVVS   PRRPWIVL+VGA++  LGY+FI A VS   P    +AMC FMFLAVHAQVFFNTANVVTGVHNFQLYGGTI+GILK
Subjt:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK

TrEMBL top hitse value%identityAlignment
A0A1S3BWC2 protein NUCLEAR FUSION DEFECTIVE 46.4e-2261.39Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRR----PWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGIL
        IGA AG ++G LYSA V+P +PRR    PW+V A GA++  LGY+FI A VS         AMCFFMFLA HAQ FFNTANVVTGVHNF  Y GTI+GI+
Subjt:  IGATAGTLAGLLYSAVVSPAHPRR----PWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGIL

Query:  K
        K
Subjt:  K

A0A5A7UT75 Protein NUCLEAR FUSION DEFECTIVE 46.4e-2261.39Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRR----PWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGIL
        IGA AG ++G LYSA V+P +PRR    PW+V A GA++  LGY+FI A VS         AMCFFMFLA HAQ FFNTANVVTGVHNF  Y GTI+GI+
Subjt:  IGATAGTLAGLLYSAVVSPAHPRR----PWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGIL

Query:  K
        K
Subjt:  K

A0A6J1BYJ5 LOW QUALITY PROTEIN: uncharacterized protein LOC1110069082.5e-2669.07Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        +GATAG LA LLYSAV S   PRR WI+  VGA++   GY+FI A VS   P     AMCFFMFLAVHAQVFFNTANVVTGVHNFQLY  TI+GILK
Subjt:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK

A0A6J1EZJ6 uncharacterized protein LOC1114407231.2e-3177.32Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        IGATAG LAGLLYSAVVS   PRRPWIVL+VGA++  LGY+FI A VS   P    +AMC FMFLAVHAQVFFNTANVVTGVHNFQLYGGTI+GILK
Subjt:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK

A0A6J1IBV3 uncharacterized protein LOC1114715423.2e-2975.26Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        IGATAG LAGLL SAVVS   PR PWIVL+VGA++  LGY+FI A VS   P     AMC FMFLAVHAQVFFNTANVVTGVHNFQLYGGTI+GILK
Subjt:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18940.1 Nodulin-like / Major Facilitator Superfamily protein1.1e-1338.46Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPR-------RPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTIL
        IG   G L+GL+Y+A       R        PW+V+ +GA+ +  GY  + A V+          MC FMF+A  +  F NTANVV+ + NF  YGGT +
Subjt:  IGATAGTLAGLLYSAVVSPAHPR-------RPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTIL

Query:  GILK
        GI+K
Subjt:  GILK

AT1G74780.1 Nodulin-like / Major Facilitator Superfamily protein2.8e-1747.17Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRR---------PWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGT
        IGA AG  +GLLY+   S     R         PW+VLAVGA++   GY  I A V+          MC FMFLA  +Q FFNTANVV+ V NF  YGGT
Subjt:  IGATAGTLAGLLYSAVVSPAHPRR---------PWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGT

Query:  ILGILK
         +GI+K
Subjt:  ILGILK

AT2G34350.1 Nodulin-like / Major Facilitator Superfamily protein1.4e-1648.04Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPR-----RPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGI
        IGA  G L+GL Y+AV S           PW+V+ VG ++  +GY FI    S   P    A MC FMF A H Q FFNTA VVT V NF  YGGT +GI
Subjt:  IGATAGTLAGLLYSAVVSPAHPR-----RPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGI

Query:  LK
        +K
Subjt:  LK

AT2G34355.1 Major facilitator superfamily protein2.0e-1544.9Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHP-RRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        IG T G ++G LY+A+ S +     PW+V+ VG V+  +G+ FI A V           MC F+FLA H+  FFNTANVVT   NF  YGGT +GI++
Subjt:  IGATAGTLAGLLYSAVVSPAHP-RRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK

AT3G01930.2 Major facilitator superfamily protein2.6e-0735.05Show/hide
Query:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK
        +G + G LAG L  + + P      W  L VG+V++ +GY ++   V+   P     AMC  +F+  + + +FNTA +V+GV NF    G ++GILK
Subjt:  IGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACATCGGCGCCACCGCCGGAACCCTCGCCGGACTCCTCTACTCCGCCGTCGTCTCCCCCGCCCACCCCCGCCGCCCCTGGATCGTCCTCGCCGTCGGGGCGGTTCG
ATCTTGCCTCGGTTACCTCTTCATCCGGGCGCGCGTCTCTCGGCCTGATCCCGACGGCCGCGGTGCGGCGATGTGCTTCTTCATGTTCTTGGCCGTTCATGCCCAAGTCT
TCTTCAACACCGCCAATGTCGTCACCGGCGTCCATAATTTCCAGCTATACGGCGGCACCATCCTCGGCATTCTTAAGAAAAAGGAAAAAGAAGATGTCGAAATGGGTCCA
ATCGTTATGTTCAAAGAAGCCCGCTGTAAGAATGGCATATGGATAAATGACGCTGCGAGAGAAGCTCTCGCAAAAATGGTAGAGATGTTGCATGCACCAACTTCTGAAGG
ATGTATACCCCTAACACAGATTGAGATTTGTGCAATTGTGTTAGGGCGACACACAGATGGGATTCAAGGCACATGTTATATGCCAGCTAGTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTACATCGGCGCCACCGCCGGAACCCTCGCCGGACTCCTCTACTCCGCCGTCGTCTCCCCCGCCCACCCCCGCCGCCCCTGGATCGTCCTCGCCGTCGGGGCGGTTCG
ATCTTGCCTCGGTTACCTCTTCATCCGGGCGCGCGTCTCTCGGCCTGATCCCGACGGCCGCGGTGCGGCGATGTGCTTCTTCATGTTCTTGGCCGTTCATGCCCAAGTCT
TCTTCAACACCGCCAATGTCGTCACCGGCGTCCATAATTTCCAGCTATACGGCGGCACCATCCTCGGCATTCTTAAGAAAAAGGAAAAAGAAGATGTCGAAATGGGTCCA
ATCGTTATGTTCAAAGAAGCCCGCTGTAAGAATGGCATATGGATAAATGACGCTGCGAGAGAAGCTCTCGCAAAAATGGTAGAGATGTTGCATGCACCAACTTCTGAAGG
ATGTATACCCCTAACACAGATTGAGATTTGTGCAATTGTGTTAGGGCGACACACAGATGGGATTCAAGGCACATGTTATATGCCAGCTAGTAAATAG
Protein sequenceShow/hide protein sequence
MYIGATAGTLAGLLYSAVVSPAHPRRPWIVLAVGAVRSCLGYLFIRARVSRPDPDGRGAAMCFFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILKKKEKEDVEMGP
IVMFKEARCKNGIWINDAAREALAKMVEMLHAPTSEGCIPLTQIEICAIVLGRHTDGIQGTCYMPASK