; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015021 (gene) of Chayote v1 genome

Gene IDSed0015021
OrganismSechium edule (Chayote v1)
DescriptionDUF4413 domain-containing protein
Genome locationLG10:27722877..27725229
RNA-Seq ExpressionSed0015021
SyntenySed0015021
Gene Ontology termsGO:0006418 - tRNA aminoacylation for protein translation (biological process)
GO:0005622 - intracellular (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44253.1 hypothetical protein Csa_016011 [Cucumis sativus]2.8e-2454.03Show/hide
Query:  KFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRPSERKIDFSNKSTSIDVKV
        ++EKYWSVIHGVLAIAT+LDPRFKMRLIEFYF +IY SHY +EI+RV++LC DL+K YSS S+   E   +    + S    S  K   +NK T +D KV
Subjt:  KFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRPSERKIDFSNKSTSIDVKV

Query:  LETVLQDQDLDDE-----SIDDVR
        LE V  DQD+DD+      +D++R
Subjt:  LETVLQDQDLDDE-----SIDDVR

TYK23151.1 zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa]2.3e-1849.62Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRP-SERKIDFSNKSTSI
        MI+KFEKYWSVIH  LAIAT LDP+FKMRLIEFYFP+IY SHY  EI+RV++LC DL+ +YSS S        ++ E   S+S P S  K D S+  TS+
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRP-SERKIDFSNKSTSI

Query:  DVKVLETVLQDQDLDDESIDDVRYNDCRKVSSK
          +      +D+ L  E       ND   V SK
Subjt:  DVKVLETVLQDQDLDDESIDDVRYNDCRKVSSK

XP_030494740.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cannabis sativa]2.8e-1661.76Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNE
        M+ KFE+YW+ IHG+LAIAT+LDPRFKM+LIE+YFPKIY   Y  E++R++ LC DL+K Y SN   E
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNE

XP_030505226.1 zinc finger BED domain-containing protein RICESLEEPER 2 [Cannabis sativa]2.8e-1661.76Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNE
        M+ KFE+YW+ IHG+LAIAT+LDPRFKM+LIE+YFPKIY   Y  E++R++ LC DL+K Y SN   E
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNE

XP_038884881.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]1.0e-2175.71Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAE
        MIAKFEKYWSVIHGVLAIAT+LDPRFKMRLI+FYFP+IY  H+++EI+RV+DLC DL+K+YSSNS    E
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAE

TrEMBL top hitse value%identityAlignment
A0A0A0K403 DUF4413 domain-containing protein1.4e-2454.03Show/hide
Query:  KFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRPSERKIDFSNKSTSIDVKV
        ++EKYWSVIHGVLAIAT+LDPRFKMRLIEFYF +IY SHY +EI+RV++LC DL+K YSS S+   E   +    + S    S  K   +NK T +D KV
Subjt:  KFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRPSERKIDFSNKSTSIDVKV

Query:  LETVLQDQDLDDE-----SIDDVR
        LE V  DQD+DD+      +D++R
Subjt:  LETVLQDQDLDDE-----SIDDVR

A0A5C7HKE4 Uncharacterized protein4.4e-1551.14Show/hide
Query:  IAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRPSERK
        IAKFEKYW+VI+G++A+AT+LDPRFKM+++EFYFP IY  + S E+++V+ LC  L+K Y  NS    E  C  ++ +CS S  S  K
Subjt:  IAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRPSERK

A0A5D3DHK7 Zinc finger BED domain-containing protein DAYSLEEPER-like1.1e-1849.62Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRP-SERKIDFSNKSTSI
        MI+KFEKYWSVIH  LAIAT LDP+FKMRLIEFYFP+IY SHY  EI+RV++LC DL+ +YSS S        ++ E   S+S P S  K D S+  TS+
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRP-SERKIDFSNKSTSI

Query:  DVKVLETVLQDQDLDDESIDDVRYNDCRKVSSK
          +      +D+ L  E       ND   V SK
Subjt:  DVKVLETVLQDQDLDDESIDDVRYNDCRKVSSK

A0A803PQR9 Uncharacterized protein1.7e-1460.94Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSN
        M+ KFE+YW+ IHG+LAIAT+LD RFKM LIE+YFPKIY   Y  E++R++ LC DL+K Y  N
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSN

A0A803PTU2 Uncharacterized protein8.9e-1658.82Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNE
        M+ KFE+YW+ IHG+LAIAT+LDPRFKM+LIE+YFPK+Y   Y  E++R++ LC DL+K Y  N   E
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNE

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 11.6e-0642.62Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYY
        M  +F+KYW   + VLAIA ++DPRFKM+L+EF + KIY    +  ++ V D   +L   Y
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYY

P03010 Putative AC9 transposase1.9e-0743.08Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNS
        M  KFEKYW V +  LA+A  LDPR+K  LIEFY  K +   Y + +     + + L ++YSS S
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNS

P08770 Putative AC transposase1.9e-0743.08Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNS
        M  KFEKYW V +  LA+A  LDPR+K  LIEFY  K +   Y + +     + + L ++YSS S
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNS

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 42.1e-0644.26Show/hide
Query:  KFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIE-IQRVKDLCKDLIKYYSS
        KF+KYW   + VLAIA  +DPRFKM+++EF + KIY    + + ++ V D   DL K Y++
Subjt:  KFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIE-IQRVKDLCKDLIKYYSS

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 24.3e-0744.26Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYY
        M  +F+KYW   + VLAIA ++DPRFKM+L+EF + KIY    +  ++ V D   +L K Y
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYY

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain1.3e-0642.62Show/hide
Query:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYY
        M  K +KYW     VLA+A ++DPRFKM+L+EF F KI+       I+ V D   +L   Y
Subjt:  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGCTAAGTTCGAAAAATATTGGAGTGTGATACATGGTGTTTTGGCCATAGCAACCATTTTAGATCCTAGGTTTAAGATGAGACTGATTGAATTTTATTTTCCTAA
AATCTACAGATCACATTATAGTATTGAAATTCAACGTGTTAAAGATTTGTGCAAAGATTTGATAAAGTATTATAGTTCAAATTCTAATAATGAAGCAGAATCTTCATGTT
CTTTGATGGAGGTGAATTGTTCGAGTTCGAGACCTAGCGAGAGAAAAATCGATTTCTCGAATAAATCTACTTCAATAGATGTCAAAGTATTGGAGACTGTTCTCCAAGAC
CAGGATTTAGATGATGAGAGTATAGATGATGTGCGATACAATGATTGTAGAAAAGTATCATCTAAAGAGTTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGCTAAGTTCGAAAAATATTGGAGTGTGATACATGGTGTTTTGGCCATAGCAACCATTTTAGATCCTAGGTTTAAGATGAGACTGATTGAATTTTATTTTCCTAA
AATCTACAGATCACATTATAGTATTGAAATTCAACGTGTTAAAGATTTGTGCAAAGATTTGATAAAGTATTATAGTTCAAATTCTAATAATGAAGCAGAATCTTCATGTT
CTTTGATGGAGGTGAATTGTTCGAGTTCGAGACCTAGCGAGAGAAAAATCGATTTCTCGAATAAATCTACTTCAATAGATGTCAAAGTATTGGAGACTGTTCTCCAAGAC
CAGGATTTAGATGATGAGAGTATAGATGATGTGCGATACAATGATTGTAGAAAAGTATCATCTAAAGAGTTTCAATAA
Protein sequenceShow/hide protein sequence
MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRPSERKIDFSNKSTSIDVKVLETVLQD
QDLDDESIDDVRYNDCRKVSSKEFQ