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Sed0015087 (gene) of Chayote v1 genome

Gene IDSed0015087
OrganismSechium edule (Chayote v1)
DescriptionMajor viral transcription factor
Genome locationLG01:6212436..6212807
RNA-Seq ExpressionSed0015087
SyntenySed0015087
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061869.1 uncharacterized protein E6C27_scaffold89G001110 [Cucumis melo var. makuwa]3.0e-4173.6Show/hide
Query:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNA--AGGGGGDERGVGFFTPGVWQHPAV
        MEN+ K +LPKPPTRLQK+APA LHLDQ+SSVSM S  +D   KAILPLLSPLPLSP PLPE +G+  SA GNA   GGG GD+RG+GF  PG WQHPAV
Subjt:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNA--AGGGGGDERGVGFFTPGVWQHPAV

Query:  ATTFADPSTLFTFFQSQCVVSSNTP
        A TF DPSTLFTFFQSQC+VSSNTP
Subjt:  ATTFADPSTLFTFFQSQCVVSSNTP

KAG6570684.1 hypothetical protein SDJN03_29599, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3665.32Show/hide
Query:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAA-GGGGGDERGVGFFTPGVWQHPAVA
        M+ND   ++PKPPTRLQK+APAGL+LDQ+SSVSM S G++   K +LPLLSPLP SP P PETEG+   ANGN    GG GD+RG+ F +PG WQHPAVA
Subjt:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAA-GGGGGDERGVGFFTPGVWQHPAVA

Query:  TTFADPSTLFTFFQSQCVVSSNTP
         T+ADPSTLFTFFQS+C+++S+TP
Subjt:  TTFADPSTLFTFFQSQCVVSSNTP

KAG6605440.1 hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia]8.0e-4273.17Show/hide
Query:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAAGGGGGDERGVGFFTPGVWQHPAVAT
        ME +HK++LPKPPTRLQK+APA LHLDQ++SVSM SG +D S KAILPLLSPLP SP P PETEG+  +ANGN   GG GD+RG+ F  PG WQHPAVAT
Subjt:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAAGGGGGDERGVGFFTPGVWQHPAVAT

Query:  TFADPSTLFTFFQSQCVVSSNTP
        TFADPSTLFTFFQSQC+V+S TP
Subjt:  TFADPSTLFTFFQSQCVVSSNTP

XP_011657141.1 uncharacterized protein LOC105435808 [Cucumis sativus]3.6e-4274.4Show/hide
Query:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNA--AGGGGGDERGVGFFTPGVWQHPAV
        MEN++K +LPKPPTRLQK+APA LHLDQ+SSVSM S  +D   KAILPLLSPLPLSP PLPE +G+  SANGNA   GGG GD+RG+GF  PG WQHPAV
Subjt:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNA--AGGGGGDERGVGFFTPGVWQHPAV

Query:  ATTFADPSTLFTFFQSQCVVSSNTP
        A TF DPSTLFTFFQSQC+VSSNTP
Subjt:  ATTFADPSTLFTFFQSQCVVSSNTP

XP_038902307.1 uncharacterized protein LOC120088941 [Benincasa hispida]1.3e-4476.8Show/hide
Query:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAA--GGGGGDERGVGFFTPGVWQHPAV
        MEN+HKA+LPKPPTRLQK+APA LHLDQ+SSVSM SG +D   KAILPLLSPLPLSP PLPE +G+  SANGNAA  GGG GD+RG+GF  PG WQHPAV
Subjt:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAA--GGGGGDERGVGFFTPGVWQHPAV

Query:  ATTFADPSTLFTFFQSQCVVSSNTP
        A TF DPSTLFTFFQSQC+V+SNTP
Subjt:  ATTFADPSTLFTFFQSQCVVSSNTP

TrEMBL top hitse value%identityAlignment
A0A0A0KBQ7 Uncharacterized protein1.7e-4274.4Show/hide
Query:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNA--AGGGGGDERGVGFFTPGVWQHPAV
        MEN++K +LPKPPTRLQK+APA LHLDQ+SSVSM S  +D   KAILPLLSPLPLSP PLPE +G+  SANGNA   GGG GD+RG+GF  PG WQHPAV
Subjt:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNA--AGGGGGDERGVGFFTPGVWQHPAV

Query:  ATTFADPSTLFTFFQSQCVVSSNTP
        A TF DPSTLFTFFQSQC+VSSNTP
Subjt:  ATTFADPSTLFTFFQSQCVVSSNTP

A0A2I4HGI9 uncharacterized protein LOC1090173602.2e-1348.67Show/hide
Query:  KAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAAGGGGGDERGVGFFTPGVWQHPAVATTFADP
        K K+ KPPTRLQK APA L LD+ +     S  S  +PKAI P LSPL LSP PLPET    +  +G+      G+E      +PG WQHPA A   ADP
Subjt:  KAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAAGGGGGDERGVGFFTPGVWQHPAVATTFADP

Query:  STLFTFFQSQCVV
        + L T FQS+C++
Subjt:  STLFTFFQSQCVV

A0A5A7V856 Uncharacterized protein1.5e-4173.6Show/hide
Query:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNA--AGGGGGDERGVGFFTPGVWQHPAV
        MEN+ K +LPKPPTRLQK+APA LHLDQ+SSVSM S  +D   KAILPLLSPLPLSP PLPE +G+  SA GNA   GGG GD+RG+GF  PG WQHPAV
Subjt:  MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNA--AGGGGGDERGVGFFTPGVWQHPAV

Query:  ATTFADPSTLFTFFQSQCVVSSNTP
        A TF DPSTLFTFFQSQC+VSSNTP
Subjt:  ATTFADPSTLFTFFQSQCVVSSNTP

A0A6J1D5B7 uncharacterized protein LOC1110170712.3e-1865.56Show/hide
Query:  MENDHKAK--LPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDG----ASANGNAAGGGGGDERG
        ME +HKAK  +PKPPTRLQK+APA LHLDQ+SS SM  GG++ S KAILPLLSPLPLSP P PETE +     ++AN NA   GGGD+RG
Subjt:  MENDHKAK--LPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDG----ASANGNAAGGGGGDERG

A0A6P3ZH11 uncharacterized protein LOC1074110182.2e-1351.28Show/hide
Query:  KAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLP---ETEGDGASANGNAAGGGGGDERGVGFFTPG-VWQHPAVATT
        +AK  KPPTRLQK+APA L LDQ+ + S  +   + + KAI PLLSPL LSP PLP   E    G +A+ +       D+R      P   WQHPAV TT
Subjt:  KAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLP---ETEGDGASANGNAAGGGGGDERGVGFFTPG-VWQHPAVATT

Query:  FADPSTLFTFFQSQCVV
        F DPS+LF FFQSQCV+
Subjt:  FADPSTLFTFFQSQCVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07473.1 unknown protein8.3e-0540.32Show/hide
Query:  KAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDG
        K++ P+ PTRLQK+AP  LHL  +         SD      +PLLSPL +SP P      +G
Subjt:  KAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACGATCACAAGGCCAAATTACCTAAGCCTCCGACGAGGTTACAGAAGCGAGCGCCGGCGGGTCTTCACCTCGATCAAATCTCAAGCGTCTCGATGTTTTCCGG
TGGTTCCGATCCTTCTCCCAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTTGTCGCCGTTACCTTTACCTGAAACTGAGGGGGATGGAGCATCGGCGAACGGAAACG
CCGCGGGCGGCGGCGGCGGCGACGAAAGAGGTGTAGGGTTTTTCACTCCTGGTGTCTGGCAACATCCGGCGGTGGCAACGACATTCGCGGATCCTTCAACTCTGTTCACT
TTTTTTCAATCGCAGTGCGTTGTAAGCAGTAACACGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACGATCACAAGGCCAAATTACCTAAGCCTCCGACGAGGTTACAGAAGCGAGCGCCGGCGGGTCTTCACCTCGATCAAATCTCAAGCGTCTCGATGTTTTCCGG
TGGTTCCGATCCTTCTCCCAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTTGTCGCCGTTACCTTTACCTGAAACTGAGGGGGATGGAGCATCGGCGAACGGAAACG
CCGCGGGCGGCGGCGGCGGCGACGAAAGAGGTGTAGGGTTTTTCACTCCTGGTGTCTGGCAACATCCGGCGGTGGCAACGACATTCGCGGATCCTTCAACTCTGTTCACT
TTTTTTCAATCGCAGTGCGTTGTAAGCAGTAACACGCCATGA
Protein sequenceShow/hide protein sequence
MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAAGGGGGDERGVGFFTPGVWQHPAVATTFADPSTLFT
FFQSQCVVSSNTP