; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015139 (gene) of Chayote v1 genome

Gene IDSed0015139
OrganismSechium edule (Chayote v1)
DescriptionRING/U-box superfamily protein
Genome locationLG06:190713..194138
RNA-Seq ExpressionSed0015139
SyntenySed0015139
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0000151 - ubiquitin ligase complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031624 - ubiquitin conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR002867 - IBR domain
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR031127 - E3 ubiquitin ligase RBR family
IPR044066 - TRIAD supradomain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144476.2 probable E3 ubiquitin-protein ligase RNF144A [Cucumis sativus]5.2e-7254.77Show/hide
Query:  LDDEELAEQLQLEEAILASMIAMEDN------NSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFL
        L DE  AE+LQL+E I +S+++   N      +S+  + C+IC D KS  +MFT   C+H+FC  CIS+HIAAKLE   AVKCPEP C  VLEP M    
Subjt:  LDDEELAEQLQLEEAILASMIAMEDN------NSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFL

Query:  VSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDD-GEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELG-GGDREDVLTLKLAGSNKW
        V K VLE W DAL EAM++K KR+ CPF++C   ++D+ GEE     EC SCWR+FCA C VGWH +MEC EF++LRKE G  GD++D +T+KLA + KW
Subjt:  VSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDD-GEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELG-GGDREDVLTLKLAGSNKW

Query:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC
        +RC  C IYV+K  GC HI C CGS+FCYSCG+KW  GHAC
Subjt:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC

XP_022956145.1 probable E3 ubiquitin-protein ligase ARI10 [Cucurbita moschata]4.9e-7857.74Show/hide
Query:  HDDAWSFDDDASSLL---------DDEELAEQLQLEEAILASMI---------AMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAK
        H  + S DD   S+L          DE  AE+LQL+E+I +S+          +    +S  T  CTIC DTKS  EMFT  GCSH+FCADCIS HIAAK
Subjt:  HDDAWSFDDDASSLL---------DDEELAEQLQLEEAILASMI---------AMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAK

Query:  LEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEK
        LED  AVKCPEPKC  VLEP M +  V KEVLE WGDALL+AML+K K +YCPF++CS  MVD  EE     ECP CWRMFCA+C VGWH DM C EF++
Subjt:  LEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEK

Query:  LRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC
        L K  GG DRE+ +T+KLA   KWKRC  C I V+KIEGC HITC CGSEFCY CG+KW   HAC
Subjt:  LRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC

XP_022980686.1 probable E3 ubiquitin-protein ligase ARI5 [Cucurbita maxima]2.0e-7660.17Show/hide
Query:  LDDEELAEQLQLEEAILASMIAMEDNN--------SSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWE
        + DE  AE+LQL+E+I +S  +   +N        S     CTIC DTKS  EMFT  GCSH+FCADCIS HIAAKL D  AVKCPEPKC  VL+P M +
Subjt:  LDDEELAEQLQLEEAILASMIAMEDNN--------SSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWE

Query:  FLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKW
          V KEVLE WGDALL+AML+K K +YCPF++CS  MVD  EE     ECP CWRMFCA+C VGWH DM C EF++L K  GG DRE+ +T+KLA   KW
Subjt:  FLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKW

Query:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC
        KRC  C I V+KI GC HITC CGSEFCYSCG KW   HAC
Subjt:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC

XP_023527456.1 probable E3 ubiquitin-protein ligase rbrA [Cucurbita pepo subsp. pepo]3.0e-7565.07Show/hide
Query:  DNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEE
        +++ SET+ CTIC  TKS  EMFT  GCSH+FCADCIS HIAA+LED  AVKCPEPKC  VLEP M +  V KEVLE WGDALL+AML+K K +YCPF++
Subjt:  DNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEE

Query:  CSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCG
        C   MVD  +E     ECP CWRMFCA+C VGWH DM C EF++L K  GG DRE+V+T+KLA   KWKRC  C I V+KIEGC HITC CGSEFCYSCG
Subjt:  CSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCG

Query:  SKWTSGHAC
        +KW   HAC
Subjt:  SKWTSGHAC

XP_038889081.1 probable E3 ubiquitin-protein ligase RNF144A-A [Benincasa hispida]5.2e-7256.02Show/hide
Query:  LDDEELAEQLQLEEAILASMIA----MEDNNSS---ETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEF
        L DE  A +LQL+EAI +S+ +    + +NNSS   +   CTIC D K   EMFT   CSH+FC DCIS +IAAKLED  AVKCP+PKC  +LEP M   
Subjt:  LDDEELAEQLQLEEAILASMIA----MEDNNSS---ETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEF

Query:  LVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREA-ECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKW
         + KEVLE WGDAL EAM++K KR+ CPF++CS  M+ +G+E    A EC +CWR+FCA+C+VGWH DMEC EFEK+RKE    + ED++T+KLA   KW
Subjt:  LVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREA-ECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKW

Query:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC
        K+C  C +YV+K  GC HI C CG++FCYSCG+KW  GHAC
Subjt:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC

TrEMBL top hitse value%identityAlignment
A0A0A0L952 Uncharacterized protein2.5e-7254.77Show/hide
Query:  LDDEELAEQLQLEEAILASMIAMEDN------NSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFL
        L DE  AE+LQL+E I +S+++   N      +S+  + C+IC D KS  +MFT   C+H+FC  CIS+HIAAKLE   AVKCPEP C  VLEP M    
Subjt:  LDDEELAEQLQLEEAILASMIAMEDN------NSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFL

Query:  VSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDD-GEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELG-GGDREDVLTLKLAGSNKW
        V K VLE W DAL EAM++K KR+ CPF++C   ++D+ GEE     EC SCWR+FCA C VGWH +MEC EF++LRKE G  GD++D +T+KLA + KW
Subjt:  VSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDD-GEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELG-GGDREDVLTLKLAGSNKW

Query:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC
        +RC  C IYV+K  GC HI C CGS+FCYSCG+KW  GHAC
Subjt:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC

A0A1S3CDI0 E3 ubiquitin-protein ligase RNF144B-like9.6e-7253.88Show/hide
Query:  LDDEELAEQLQLEEAILASMI----------AMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGM
        L DE  AE+LQL+E I +S++          +   ++S+  + C+IC D KS  +MFT   C+H+FC DCIS HIAAKLE   AVKCPEP C  VLEP M
Subjt:  LDDEELAEQLQLEEAILASMI----------AMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGM

Query:  WEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDG-EEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELG-GGDREDVLTLKLAG
            V K VLE W DAL EAM++K+KR+ CPF++C   M+D+G EE     EC SCWR+FCA C VGWH +M+C EF++LRKE G  GD++D +T+KLA 
Subjt:  WEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDG-EEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELG-GGDREDVLTLKLAG

Query:  SNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC
        + KW+RC  C IYV+K  GC HI C CGSEFCYSCG KW   HAC
Subjt:  SNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC

A0A5A7UED3 E3 ubiquitin-protein ligase RNF144B-like protein9.6e-7253.88Show/hide
Query:  LDDEELAEQLQLEEAILASMI----------AMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGM
        L DE  AE+LQL+E I +S++          +   ++S+  + C+IC D KS  +MFT   C+H+FC DCIS HIAAKLE   AVKCPEP C  VLEP M
Subjt:  LDDEELAEQLQLEEAILASMI----------AMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGM

Query:  WEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDG-EEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELG-GGDREDVLTLKLAG
            V K VLE W DAL EAM++K+KR+ CPF++C   M+D+G EE     EC SCWR+FCA C VGWH +M+C EF++LRKE G  GD++D +T+KLA 
Subjt:  WEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDG-EEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELG-GGDREDVLTLKLAG

Query:  SNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC
        + KW+RC  C IYV+K  GC HI C CGSEFCYSCG KW   HAC
Subjt:  SNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC

A0A6J1GX07 probable E3 ubiquitin-protein ligase ARI102.4e-7857.74Show/hide
Query:  HDDAWSFDDDASSLL---------DDEELAEQLQLEEAILASMI---------AMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAK
        H  + S DD   S+L          DE  AE+LQL+E+I +S+          +    +S  T  CTIC DTKS  EMFT  GCSH+FCADCIS HIAAK
Subjt:  HDDAWSFDDDASSLL---------DDEELAEQLQLEEAILASMI---------AMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAK

Query:  LEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEK
        LED  AVKCPEPKC  VLEP M +  V KEVLE WGDALL+AML+K K +YCPF++CS  MVD  EE     ECP CWRMFCA+C VGWH DM C EF++
Subjt:  LEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEK

Query:  LRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC
        L K  GG DRE+ +T+KLA   KWKRC  C I V+KIEGC HITC CGSEFCY CG+KW   HAC
Subjt:  LRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC

A0A6J1IU95 probable E3 ubiquitin-protein ligase ARI59.9e-7760.17Show/hide
Query:  LDDEELAEQLQLEEAILASMIAMEDNN--------SSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWE
        + DE  AE+LQL+E+I +S  +   +N        S     CTIC DTKS  EMFT  GCSH+FCADCIS HIAAKL D  AVKCPEPKC  VL+P M +
Subjt:  LDDEELAEQLQLEEAILASMIAMEDNN--------SSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWE

Query:  FLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKW
          V KEVLE WGDALL+AML+K K +YCPF++CS  MVD  EE     ECP CWRMFCA+C VGWH DM C EF++L K  GG DRE+ +T+KLA   KW
Subjt:  FLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKW

Query:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC
        KRC  C I V+KI GC HITC CGSEFCYSCG KW   HAC
Subjt:  KRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWTSGHAC

SwissProt top hitse value%identityAlignment
D3YYI7 Probable E3 ubiquitin-protein ligase RNF2175.5e-1623.79Show/hide
Query:  MCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLE-DHAAVKCPEPKCTVVLEPGMWEF-LVSKEVLEWWGDALLEAMLVKTKRIYCP-------F
        + C +C++ K +     +  C  + C +C+  +++++++     +KCP  +C   LE     + L  ++ +++     LE   + +    CP       F
Subjt:  MCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLE-DHAAVKCPEPKCTVVLEPGMWEF-LVSKEVLEWWGDALLEAMLVKTKRIYCP-------F

Query:  EECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITC-MCGSEFCY
        ++   +      E+  + +CP+C  ++C +C   WHE + C+E++K  K L     E        G    ++C +C I++ + EGC H+TC  C + FCY
Subjt:  EECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITC-MCGSEFCY

Query:  SCGSKW
         CG ++
Subjt:  SCGSKW

F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic2.2e-1726.34Show/hide
Query:  CTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAA--VKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKT--KRIYCPFEECSGV-
        C IC+    VD+ +++EGCSH FC  C+     A + +  A  + C    C   +       L+S+E L+    A L + +  +  K  +C   +C  V 
Subjt:  CTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAA--VKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKT--KRIYCPFEECSGV-

Query:  MVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWT
         V   +E+     C +C    C RC + +H  + CE ++K +      +  D+     A     K C  C   ++K +GC+H+ C CG   C++C   +T
Subjt:  MVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWT

Query:  SGHAC
            C
Subjt:  SGHAC

P0CE10 ATP-dependent RNA helicase DEAH11, chloroplastic1.0e-1726.34Show/hide
Query:  CTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAA--VKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKT--KRIYCPFEECSGV-
        C IC+    VD+ +++EGCSH FC  C+     A + +  A  + C    C   +       L+S+E L+    A L A +  +  K  +C   +C  + 
Subjt:  CTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAA--VKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKT--KRIYCPFEECSGV-

Query:  MVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWT
         V   +E+     C +C    C RC + +H  + CE ++K +      +  D+     A     K C  C   ++K +GC+H+ C CG   C++C   +T
Subjt:  MVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWT

Query:  SGHAC
            C
Subjt:  SGHAC

Q4KLT0 Probable E3 ubiquitin-protein ligase RNF2171.9e-1625Show/hide
Query:  MCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLE-DHAAVKCPEPKCTVVL-EPGMWEFLVSKEVLEWWGDALLEAMLVKTK-----RIYCPFEE
        M C +C++ +S+     +  C    C +C+  +++++++   A ++CP  +C   L E  +   L   +++++     L  M   TK     + +  F+ 
Subjt:  MCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLE-DHAAVKCPEPKCTVVL-EPGMWEFLVSKEVLEWWGDALLEAMLVKTK-----RIYCPFEE

Query:  CSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITC-MCGSEFCYSC
         + +      E   + +CPSC  ++C RC   WHE + C E++K  K L     E        G    ++C +C +++ + EGC H+TC  C + FCY C
Subjt:  CSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITC-MCGSEFCYSC

Query:  GSKW
        G ++
Subjt:  GSKW

Q8TC41 Probable E3 ubiquitin-protein ligase RNF2174.2e-1624.27Show/hide
Query:  MCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLE-DHAAVKCPEPKCTVVLEPGMWEF-LVSKEVLEWWGDALLEAMLVKTKRIYCP-------F
        + C +C++ K +     +  C  + C +C+  +++A+++     +KCP  +C   LE     + L  ++ +++     LE   + +    CP       F
Subjt:  MCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLE-DHAAVKCPEPKCTVVLEPGMWEF-LVSKEVLEWWGDALLEAMLVKTKRIYCP-------F

Query:  EECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITC-MCGSEFCY
        ++   +      E+  + +CP+C  ++C +C   WHE + C+E++K  K L     E        G    ++C +C I++ + EGC H+TC  C + FCY
Subjt:  EECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITC-MCGSEFCY

Query:  SCGSKW
         CG ++
Subjt:  SCGSKW

Arabidopsis top hitse value%identityAlignment
AT2G26135.1 RING/U-box protein with C6HC-type zinc finger1.9e-3232.31Show/hide
Query:  CTICMDTK-SVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVM--V
        CTIC D   + D MF I+ C H FC++C+  HI   L   + + CP  +C   L  G    +++ +V E W   + E  +  T R+YCP   CS +M   
Subjt:  CTICMDTK-SVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVM--V

Query:  DDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGS
        +  +    +  C  C   FC +C+V WH+++ C+ ++KL       D++     +LA    W++CS+C   ++  +GC  + C CG EFCY CG+
Subjt:  DDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGS

AT3G14250.1 RING/U-box superfamily protein2.1e-5040Show/hide
Query:  CTICMDTKSVDEMFT-IEGCSHSFCADCISHHIAAKLEDHAA-VKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMV-
        C ICMD K   ++F     C+H++C DC   ++A K++++A+ +KCP+ +CT ++EP     L+ K+V + W   L E+++    + YCPF++CS +MV 
Subjt:  CTICMDTKSVDEMFT-IEGCSHSFCADCISHHIAAKLEDHAA-VKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMV-

Query:  -DDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKL-RKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWT
         ++G+    + EC SC R+FC +C+V WH  + C+EF++    +    D +D L +++A + +W+RC  C  YVDK+EGC HI C CG +FCY CGS W+
Subjt:  -DDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKL-RKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSCGSKWT

Query:  SGHAC
        S HAC
Subjt:  SGHAC

AT3G53690.1 RING/U-box superfamily protein6.4e-5243.56Show/hide
Query:  NNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDH-AAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEE
        ++ + T  C IC+D+KS+ E F I GCSH +C DC+S +IAAKL+D+  +++CP   C+  LEP     ++ KEV + WGDAL EA+++++K+ YCP+++
Subjt:  NNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDH-AAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVKTKRIYCPFEE

Query:  CSG-VMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSC
        CS  V +++ E   +++ECP C RM C  C   WH +M CEEF+KL     G  R+D+L   +A   KWKRC  C  Y++K +GC ++ C CG  FCY+C
Subjt:  CSG-VMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGCSHITCMCGSEFCYSC

Query:  GS
        G+
Subjt:  GS

AT5G37560.1 RING/U-box superfamily protein2.7e-3430.94Show/hide
Query:  AILASMIAMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVK
        A+  ++ A+      + + C+IC D    + M   + C H  C  C+   +  KL       C E  C   L       +++ +++E W   + E ++  
Subjt:  AILASMIAMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEAMLVK

Query:  TKRIYCPFEECSGVMVDDGEEAAREAE------CPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGC
         ++IYCP+  CS  M+    E +REAE      C  C  +FC  C+V WH D+ C +++++  E       D++   LA    W++CS+C   ++  EGC
Subjt:  TKRIYCPFEECSGVMVDDGEEAAREAE------CPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYVDKIEGC

Query:  SHITCMCGSEFCYSCGSKWTSGH
        +HITC CG EFCY CG KWT  H
Subjt:  SHITCMCGSEFCYSCGSKWTSGH

AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein2.1e-3432.02Show/hide
Query:  EAILASMIAMEDNNSSETMC---CTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEA
        E+IL+ +   ED   ++ +    C IC +    + MF+++ C H FC  C+  H+  KL    A KCP   C   L       L++ ++ + W   L E 
Subjt:  EAILASMIAMEDNNSSETMC---CTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWEFLVSKEVLEWWGDALLEA

Query:  MLVKTKRIYCPFEECSGVMVDDG-EEAARE----------AECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCN
         +  T+R+YCP+  CS +M      E+A+             C  C  +FC  C+V WH ++ C E++KL  E      +DV    LA +  W++C +C 
Subjt:  MLVKTKRIYCPFEECSGVMVDDG-EEAARE----------AECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCN

Query:  IYVDKIEGCSHITCMCGSEFCYSCGSKW
          ++  +GC+HITC CG EFCY+CG  W
Subjt:  IYVDKIEGCSHITCMCGSEFCYSCGSKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATTTCCATGACGATGCATGGTCCTTTGATGACGACGCATCGTCATTGTTGGATGATGAAGAGTTGGCAGAACAATTACAGCTCGAGGAAGCAATCTTGGCTTC
AATGATTGCAATGGAGGATAACAATTCTTCTGAAACAATGTGCTGCACCATCTGTATGGACACAAAATCTGTAGATGAAATGTTCACAATCGAAGGCTGCTCACATTCGT
TCTGCGCCGACTGCATCTCCCACCACATTGCTGCGAAGCTCGAGGACCACGCGGCGGTGAAGTGTCCGGAGCCGAAGTGCACGGTGGTGCTGGAGCCGGGTATGTGGGAG
TTTTTGGTTTCGAAAGAGGTGTTGGAGTGGTGGGGAGATGCTCTGTTAGAGGCGATGCTTGTGAAGACGAAGAGAATCTACTGTCCGTTTGAGGAGTGCTCGGGGGTGAT
GGTGGACGATGGAGAGGAGGCGGCGAGGGAAGCGGAGTGTCCGAGTTGTTGGAGAATGTTCTGCGCGCGATGTGAAGTTGGATGGCATGAGGATATGGAATGCGAGGAGT
TTGAGAAACTACGGAAGGAGTTGGGAGGAGGAGACAGAGAGGATGTGTTGACGTTGAAGCTGGCTGGTAGCAACAAATGGAAGAGATGCTCTCAATGCAATATTTATGTT
GATAAGATCGAAGGTTGCTCCCATATTACCTGCATGTGTGGATCGGAGTTTTGCTACAGCTGTGGATCCAAGTGGACTAGTGGCCATGCATGTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATTTCCATGACGATGCATGGTCCTTTGATGACGACGCATCGTCATTGTTGGATGATGAAGAGTTGGCAGAACAATTACAGCTCGAGGAAGCAATCTTGGCTTC
AATGATTGCAATGGAGGATAACAATTCTTCTGAAACAATGTGCTGCACCATCTGTATGGACACAAAATCTGTAGATGAAATGTTCACAATCGAAGGCTGCTCACATTCGT
TCTGCGCCGACTGCATCTCCCACCACATTGCTGCGAAGCTCGAGGACCACGCGGCGGTGAAGTGTCCGGAGCCGAAGTGCACGGTGGTGCTGGAGCCGGGTATGTGGGAG
TTTTTGGTTTCGAAAGAGGTGTTGGAGTGGTGGGGAGATGCTCTGTTAGAGGCGATGCTTGTGAAGACGAAGAGAATCTACTGTCCGTTTGAGGAGTGCTCGGGGGTGAT
GGTGGACGATGGAGAGGAGGCGGCGAGGGAAGCGGAGTGTCCGAGTTGTTGGAGAATGTTCTGCGCGCGATGTGAAGTTGGATGGCATGAGGATATGGAATGCGAGGAGT
TTGAGAAACTACGGAAGGAGTTGGGAGGAGGAGACAGAGAGGATGTGTTGACGTTGAAGCTGGCTGGTAGCAACAAATGGAAGAGATGCTCTCAATGCAATATTTATGTT
GATAAGATCGAAGGTTGCTCCCATATTACCTGCATGTGTGGATCGGAGTTTTGCTACAGCTGTGGATCCAAGTGGACTAGTGGCCATGCATGTACCTAA
Protein sequenceShow/hide protein sequence
MEDFHDDAWSFDDDASSLLDDEELAEQLQLEEAILASMIAMEDNNSSETMCCTICMDTKSVDEMFTIEGCSHSFCADCISHHIAAKLEDHAAVKCPEPKCTVVLEPGMWE
FLVSKEVLEWWGDALLEAMLVKTKRIYCPFEECSGVMVDDGEEAAREAECPSCWRMFCARCEVGWHEDMECEEFEKLRKELGGGDREDVLTLKLAGSNKWKRCSQCNIYV
DKIEGCSHITCMCGSEFCYSCGSKWTSGHACT