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Sed0015143 (gene) of Chayote v1 genome

Gene IDSed0015143
OrganismSechium edule (Chayote v1)
Descriptionamino acid transporter AVT1A-like
Genome locationLG02:45710174..45713081
RNA-Seq ExpressionSed0015143
SyntenySed0015143
Gene Ontology termsGO:0006865 - amino acid transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015293 - symporter activity (molecular function)
InterPro domainsIPR013057 - Amino acid transporter, transmembrane domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443261.1 PREDICTED: amino acid transporter ANT1-like [Cucumis melo]4.3e-3990.57Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLP R SNS WCS+LIRTALVISSLCVALLLPFFGLVMALIGSLL ILIAIIIPASCFLKIMG+EAS IQI+SCKVVIVLGII AILGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQL
        SSFS+L
Subjt:  SSFSQL

XP_022147748.1 amino acid transporter AVT1A-like [Momordica charantia]1.9e-3988.99Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLPAR+SNS  CSILIRTALVISS+CVALLLPFFGLVMALIGSLL ILIAIIIPASCFLKIMGKEA+N QI+SCKVVIVLGIIGAILGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQLISQ
        SSFS++  Q
Subjt:  SSFSQLISQ

XP_022983749.1 amino acid transporter AVT1A-like isoform X1 [Cucurbita maxima]3.3e-3985.85Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLPAR SNS WCSILIRTALV+SSLCVALLLPFFGLV+ALIGSLL ILIAI+IPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQL
        SSFSQ+
Subjt:  SSFSQL

XP_022983750.1 amino acid transporter AVT1A-like isoform X2 [Cucurbita maxima]3.3e-3985.85Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLPAR SNS WCSILIRTALV+SSLCVALLLPFFGLV+ALIGSLL ILIAI+IPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQL
        SSFSQ+
Subjt:  SSFSQL

XP_038905343.1 amino acid transporter AVT1A-like isoform X1 [Benincasa hispida]4.6e-4194.34Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLPAR SNS WCSILIRTALVISSLCVALLLPFFGLVMALIGSLL ILIAIIIPASCFLKIMGKEAS IQI+SCKVVI+LGIIGAILGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQL
        SSFSQL
Subjt:  SSFSQL

TrEMBL top hitse value%identityAlignment
A0A1S3B748 amino acid transporter ANT1-like2.1e-3990.57Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLP R SNS WCS+LIRTALVISSLCVALLLPFFGLVMALIGSLL ILIAIIIPASCFLKIMG+EAS IQI+SCKVVIVLGII AILGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQL
        SSFS+L
Subjt:  SSFSQL

A0A6J1D256 amino acid transporter AVT1A-like9.3e-4088.99Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLPAR+SNS  CSILIRTALVISS+CVALLLPFFGLVMALIGSLL ILIAIIIPASCFLKIMGKEA+N QI+SCKVVIVLGIIGAILGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQLISQ
        SSFS++  Q
Subjt:  SSFSQLISQ

A0A6J1F8E2 amino acid transporter AVT1A-like isoform X15.1e-3884.91Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLPAR SNS WCSILIRTALV+SSL VALLLPFFGLV+ LIGSLL ILIAIIIPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQL
        SSFSQ+
Subjt:  SSFSQL

A0A6J1J6S8 amino acid transporter AVT1A-like isoform X21.6e-3985.85Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLPAR SNS WCSILIRTALV+SSLCVALLLPFFGLV+ALIGSLL ILIAI+IPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQL
        SSFSQ+
Subjt:  SSFSQL

A0A6J1J8D0 amino acid transporter AVT1A-like isoform X11.6e-3985.85Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        MTPLAKSIEERLPAR SNS WCSILIRTALV+SSLCVALLLPFFGLV+ALIGSLL ILIAI+IPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQL
        SSFSQ+
Subjt:  SSFSQL

SwissProt top hitse value%identityAlignment
F4IUW3 Amino acid transporter AVT1C2.3e-1944.04Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        ++P+A S+EE +P+R   S W +I IRT LV S+L V L +PFFGLVM+LIGSLL++L+ +I+P +CFL I+ ++ +  Q++ C ++I++G I +++G+Y
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQLISQ
        S+ S+++ +
Subjt:  SSFSQLISQ

F4JE35 Amino acid transporter AVT1B7.4e-1842.2Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        ++P+A S+EE +P+ +  S + +I IR+AL IS+L V L +PFFGLVM+LIGS L++LI +I+P +CFL I+ K+ +  Q+  C +++ +G + +++GTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQLISQ
        S+ +++I +
Subjt:  SSFSQLISQ

O80668 Amino acid transporter AVT1A3.9e-2757.94Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        M PLA+SIEE LP R S + WC +L+RTALV SS+C A L+PFFGL+MALIGSLLSIL+AII+PA CF+KIMG +A+  Q++   +++ +G++   LGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQLI
        SS +++I
Subjt:  SSFSQLI

Q8GYS4 Amino acid transporter AVT1D2.4e-1646.79Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        +TP+  S+EE +P     S   SIL RT LV S+L VAL +PFF +V ALIGS L++L+A+I P  C+L I+  + SN QI  C  +IV G++    GTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQLISQ
        S+ S+L +Q
Subjt:  SSFSQLISQ

Q8LPF4 Amino acid transporter AVT1E7.7e-1543.24Show/hide
Query:  MTPLAKSIEERLP--ARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILG
        +TP+  S+EE +P  +R   S   S+L RT LV+S+L VAL +PFF  V ALIGS +++LIA+I P  C++ IM    +N QI  C +++++GI+    G
Subjt:  MTPLAKSIEERLP--ARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILG

Query:  TYSSFSQLISQ
        TYS+ ++LI +
Subjt:  TYSSFSQLISQ

Arabidopsis top hitse value%identityAlignment
AT2G39130.1 Transmembrane amino acid transporter family protein1.6e-2044.04Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        ++P+A S+EE +P+R   S W +I IRT LV S+L V L +PFFGLVM+LIGSLL++L+ +I+P +CFL I+ ++ +  Q++ C ++I++G I +++G+Y
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQLISQ
        S+ S+++ +
Subjt:  SSFSQLISQ

AT2G41190.1 Transmembrane amino acid transporter family protein2.8e-2857.94Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        M PLA+SIEE LP R S + WC +L+RTALV SS+C A L+PFFGL+MALIGSLLSIL+AII+PA CF+KIMG +A+  Q++   +++ +G++   LGTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQLI
        SS +++I
Subjt:  SSFSQLI

AT3G09330.1 Transmembrane amino acid transporter family protein5.6e-1340Show/hide
Query:  MTPLAKSIEE-RLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGT
        +TP+   +EE  LP+    S   SI I+T LV+S+L VAL  PFF ++ AL+GS L++L+  I P  C+L I+    S  QI  C  +I+ GI+    GT
Subjt:  MTPLAKSIEE-RLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGT

Query:  YSSFSQLISQ
        YS+  +L+ +
Subjt:  YSSFSQLISQ

AT5G02170.1 Transmembrane amino acid transporter family protein5.4e-1643.24Show/hide
Query:  MTPLAKSIEERLP--ARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILG
        +TP+  S+EE +P  +R   S   S+L RT LV+S+L VAL +PFF  V ALIGS +++LIA+I P  C++ IM    +N QI  C +++++GI+    G
Subjt:  MTPLAKSIEERLP--ARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILG

Query:  TYSSFSQLISQ
        TYS+ ++LI +
Subjt:  TYSSFSQLISQ

AT5G02180.1 Transmembrane amino acid transporter family protein1.7e-1746.79Show/hide
Query:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY
        +TP+  S+EE +P     S   SIL RT LV S+L VAL +PFF +V ALIGS L++L+A+I P  C+L I+  + SN QI  C  +IV G++    GTY
Subjt:  MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTY

Query:  SSFSQLISQ
        S+ S+L +Q
Subjt:  SSFSQLISQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCATTGGCAAAGAGTATAGAGGAGAGATTACCAGCAAGATTTTCAAATAGCTGCTGGTGTTCCATTCTTATAAGAACTGCACTTGTTATCTCTTCTCTTTGTGT
GGCTCTCCTTCTCCCATTTTTTGGTCTAGTGATGGCTTTAATTGGTTCCCTTCTCTCCATACTCATTGCAATTATAATACCAGCCTCTTGCTTTTTGAAAATCATGGGGA
AGGAAGCTTCCAATATACAGATATTATCATGCAAGGTGGTAATTGTTTTGGGCATCATTGGAGCAATCCTTGGAACATACTCTTCATTTTCACAGCTCATCAGCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCATTGGCAAAGAGTATAGAGGAGAGATTACCAGCAAGATTTTCAAATAGCTGCTGGTGTTCCATTCTTATAAGAACTGCACTTGTTATCTCTTCTCTTTGTGT
GGCTCTCCTTCTCCCATTTTTTGGTCTAGTGATGGCTTTAATTGGTTCCCTTCTCTCCATACTCATTGCAATTATAATACCAGCCTCTTGCTTTTTGAAAATCATGGGGA
AGGAAGCTTCCAATATACAGATATTATCATGCAAGGTGGTAATTGTTTTGGGCATCATTGGAGCAATCCTTGGAACATACTCTTCATTTTCACAGCTCATCAGCCAGTGA
Protein sequenceShow/hide protein sequence
MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ