CuGenDBv2

Gene ID	Sed0015165
Organism	Sechium edule (Chayote v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages;
Genome location	LG04:35429360..35430268
RNA-Seq Expression	Sed0015165
Synteny	Sed0015165
Gene Ontology terms	NA
InterPro domains	IPR014848 - Reduced growth phenotype protein 1

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022964483.1 uncharacterized protein LOC111464493 [Cucurbita moschata]

3.2e-40

73.6

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GSRFSIFGS  A AADKVEKS   DV PGLK+RSDK VY PGDPVVVT++I S  S+  F+ SL I+RL F+IIGL KLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKS
        ER+FMDCSV SIVSN+IISSGATKS
Subjt:  ERVFMDCSVPSIVSNRIISSGATKS

XP_022999897.1 uncharacterized protein LOC111494236 [Cucurbita maxima]

7.1e-40

72.8

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GSRFSIFGS  A AADKV+KS   DV PGLK+RSDK VY PGDPVVVT++I S  S+  F+ SL I+RL F+IIGL KLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKS
        ER+FMDCSV SIVSN+IISSGATKS
Subjt:  ERVFMDCSVPSIVSNRIISSGATKS

XP_023514696.1 uncharacterized protein LOC111778917 [Cucurbita pepo subsp. pepo]

6.4e-41

73.6

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GSRFSIFGS  A+AADKVEKS   DV PGLK+RSDK VY PGDPVVVT++I S  S+ P++ SL I+RL F+IIGL KLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKS
        ER+FMDCSV SIVSN+IISSGATKS
Subjt:  ERVFMDCSVPSIVSNRIISSGATKS

XP_038904898.1 uncharacterized protein LOC120091119 isoform X1 [Benincasa hispida]

5.4e-40

73.6

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GSRFSIFG  T  +ADKVE S   +V PGLK+RSDK VYRPGDPVVVT++ICS  S++ F+ SLLI+RLSF+IIGL KLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKS
        E VFMDCSV SIVSN+IISSGATKS
Subjt:  ERVFMDCSVPSIVSNRIISSGATKS

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]

5.4e-40

73.6

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GSRFSIFG  T  +ADKVE S   +V PGLK+RSDK VYRPGDPVVVT++ICS  S++ F+ SLLI+RLSF+IIGL KLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKS
        E VFMDCSV SIVSN+IISSGATKS
Subjt:  ERVFMDCSVPSIVSNRIISSGATKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVN2 Uncharacterized protein

5.9e-40

66.91

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GSRFSIFG+  A AADKVEKS   +  PGLK+RSDK VYRPGDPVVVT++ICS  S+   + SLLI+RL F+IIGLHKLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKSCECMCTEFLYLCCS
        E +FMDCSV SIVS++IISSGA KSC+ M     + C S
Subjt:  ERVFMDCSVPSIVSNRIISSGATKSCECMCTEFLYLCCS

A0A1S3C1F5 uncharacterized protein LOC103495739 isoform X2

1.4e-38

71.2

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GS+FSIFG  T TAADKVEKS   +  PGLK+RSDK VYRPGDPVVVT++ICS  S+   + SLLI+RL F+IIGL KLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKS
        E +FMDCSV SIVSN+IISSGA KS
Subjt:  ERVFMDCSVPSIVSNRIISSGATKS

A0A1S4E0M0 uncharacterized protein LOC103495739 isoform X1

1.4e-38

71.2

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GS+FSIFG  T TAADKVEKS   +  PGLK+RSDK VYRPGDPVVVT++ICS  S+   + SLLI+RL F+IIGL KLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKS
        E +FMDCSV SIVSN+IISSGA KS
Subjt:  ERVFMDCSVPSIVSNRIISSGATKS

A0A6J1HKY7 uncharacterized protein LOC111464493

1.5e-40

73.6

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GSRFSIFGS  A AADKVEKS   DV PGLK+RSDK VY PGDPVVVT++I S  S+  F+ SL I+RL F+IIGL KLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKS
        ER+FMDCSV SIVSN+IISSGATKS
Subjt:  ERVFMDCSVPSIVSNRIISSGATKS

A0A6J1KC17 uncharacterized protein LOC111494236

3.4e-40

72.8

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        M GSRFSIFGS  A AADKV+KS   DV PGLK+RSDK VY PGDPVVVT++I S  S+  F+ SL I+RL F+IIGL KLDA WFST KP PGSKQR G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGATKS
        ER+FMDCSV SIVSN+IISSGATKS
Subjt:  ERVFMDCSVPSIVSNRIISSGATKS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G50120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

4.0e-25

44.26

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Query:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG
        ML SRFS  G  +++  +         + P L +++DK VYRPGD + VT+++ +S   +    S+L+++LSF++ GL KLD  WFST KP+PGSK R G
Subjt:  MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTG

Query:  ERVFMDCSVPSIVSNRIISSGA
        E +F+D S PS++SN+I+S GA
Subjt:  ERVFMDCSVPSIVSNRIISSGA

Sequences

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CDS sequence

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ATGTTGGGATCTAGGTTTTCGATTTTCGGAAGCGCTACTGCTACAGCAGCTGATAAGGTTGAGAAGTCGCCGATCGGCGATGTACTTCCTGGCCTGAAAATTCGTTCCGA
TAAAGCTGTGTACCGGCCTGGCGATCCGGTTGTTGTTACTCTTCAAATCTGCTCCTCTCTCTCTCTCTCTCCTTTTGAACGTTCCCTTTTGATCAAACGCCTCAGTTTTC
AGATCATTGGCCTCCACAAGCTCGACGCTCTGTGGTTCAGTACTCACAAACCAACCCCTGGATCCAAACAACGCACAGGTGAACGCGTTTTCATGGACTGCTCCGTTCCA
TCCATAGTTTCGAATCGGATCATTTCTTCGGGGGCTACTAAGTCATGTGAGTGTATGTGCACTGAATTTCTGTATCTCTGTTGCTCAGATGCCTCATGCCTTTACTTCAC
TTACAATGTTGCTTGTTTGGTATTTTGCATTCCCTTGTTTCATTCCAAGTACACTGTTCATTACATTTTTGTTATGTACTTCGACATATTGTCAAATGATATGCTGACCT
TGGTGAAACATTGTTGGGCATTGCTATTTGAATTTGTTTCTAATTCCTGA

mRNA sequence

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Protein sequence

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MLGSRFSIFGSATATAADKVEKSPIGDVLPGLKIRSDKAVYRPGDPVVVTLQICSSLSLSPFERSLLIKRLSFQIIGLHKLDALWFSTHKPTPGSKQRTGERVFMDCSVP
SIVSNRIISSGATKSCECMCTEFLYLCCSDASCLYFTYNVACLVFCIPLFHSKYTVHYIFVMYFDILSNDMLTLVKHCWALLFEFVSNS

Sed0015165 (gene) of Chayote v1 genome