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Sed0015188 (gene) of Chayote v1 genome

Gene IDSed0015188
OrganismSechium edule (Chayote v1)
Descriptionubiquitin-conjugating enzyme 28
Genome locationLG12:790756..793262
RNA-Seq ExpressionSed0015188
SyntenySed0015188
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
GO:0005524 - ATP binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7845205.1 ubiquitin-conjugating enzyme E2 28 [Senna tora]2.1e-1867.11Show/hide
Query:  MASKRILKELNRAFGVLPSLC----------CSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+ C          C+ +  CPVAEDMFHWQATIMGP DSPYAGGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLC----------CSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

KGN56498.2 hypothetical protein Csa_009859 [Cucumis sativus]1.9e-1967.06Show/hide
Query:  VPLIYLRLSHQFSRSLLPSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        VP   + L   F   LLPSMASKRILKEL       P+ C +     PVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDYPF
Subjt:  VPLIYLRLSHQFSRSLLPSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

KJB39134.1 hypothetical protein B456_007G025200, partial [Gossypium raimondii]2.1e-1867.9Show/hide
Query:  LSHQFSRSLLP---SMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        LS  FS  + P   +MASKRILKEL       P+ C +     PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
Subjt:  LSHQFSRSLLP---SMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

NP_001154445.1 ubiquitin-conjugating enzyme 28 [Arabidopsis thaliana]1.1e-1973.24Show/hide
Query:  MASKRILKELNRAFGVLPSLCCS-----CYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+ C +     CY TCPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCS-----CYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

RYR41682.1 hypothetical protein Ahy_A08g038094 isoform A [Arachis hypogaea]1.6e-1872.22Show/hide
Query:  RSLLPSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        R L+ +MASKRILKEL       P+ C +     PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
Subjt:  RSLLPSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

TrEMBL top hitse value%identityAlignment
A0A1D1YNL0 Ubiquitin-conjugating enzyme E2 28 (Fragment)7.8e-1975Show/hide
Query:  PSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        P+MASKRILKEL       P+ C +     PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
Subjt:  PSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

A0A1D1Z9Q0 Ubiquitin-conjugating enzyme E2 28 (Fragment)7.8e-1975Show/hide
Query:  PSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        P+MASKRILKEL       P+ C +     PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
Subjt:  PSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

A0A445BSR3 UBC core domain-containing protein7.8e-1972.22Show/hide
Query:  RSLLPSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        R L+ +MASKRILKEL       P+ C +     PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
Subjt:  RSLLPSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

A0A7C9DR62 E2 ubiquitin-conjugating enzyme2.7e-1965.48Show/hide
Query:  PLIYLRLSHQFSRSLLPSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        P  +L L+  +  SL P MASKRILKEL       P+ C +     PVAEDMFHWQATIMGP DSPYAGGVFLVTIHFPPDYPF
Subjt:  PLIYLRLSHQFSRSLLPSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

F4I5C0 Ubiquitin-conjugating enzyme 285.4e-2073.24Show/hide
Query:  MASKRILKELNRAFGVLPSLCCS-----CYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+ C +     CY TCPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCS-----CYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

SwissProt top hitse value%identityAlignment
P35132 SUMO-conjugating enzyme UBC93.4e-1972.73Show/hide
Query:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+ C +     PVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

P35133 Ubiquitin-conjugating enzyme E2 104.4e-1972.73Show/hide
Query:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+ C +     PVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

P35134 Ubiquitin-conjugating enzyme E2 118.9e-2074.24Show/hide
Query:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       PS C +     PVAEDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

Q8S919 Ubiquitin-conjugating enzyme E2 5B2.6e-1972.73Show/hide
Query:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+ C +     PVAEDMFHWQAT+MGP DSPYAGGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

Q94F47 Ubiquitin-conjugating enzyme E2 283.4e-1972.73Show/hide
Query:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+ C +     PVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

Arabidopsis top hitse value%identityAlignment
AT1G64230.1 ubiquitin-conjugating enzyme 282.4e-2072.73Show/hide
Query:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+ C +     PVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

AT1G64230.3 ubiquitin-conjugating enzyme 281.0e-2373.24Show/hide
Query:  MASKRILKELNRAFGVLPSLCCS-----CYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+ C +     CY TCPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCS-----CYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

AT3G08690.1 ubiquitin-conjugating enzyme 116.3e-2174.24Show/hide
Query:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       PS C +     PVAEDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

AT3G08690.2 ubiquitin-conjugating enzyme 116.3e-2174.24Show/hide
Query:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       PS C +     PVAEDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF

AT5G41700.4 ubiquitin conjugating enzyme 81.4e-2072.73Show/hide
Query:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF
        MASKRILKEL       P+   SC    PVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDYPF
Subjt:  MASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGATGGTTTTTTTTTTTGTCATCCTTCAAAATGTCCTATATTAATAGTTTTCTTCCTTCTTCTTTTTTTTGGAAATAGCATTGTCCCTCTTATATATCTCAGACT
TTCCCATCAATTTAGCCGTTCCTTGTTACCATCCATGGCGTCGAAGCGGATCCTGAAGGAGCTCAATCGCGCGTTCGGTGTTCTTCCTTCACTATGTTGTTCTTGTTATG
TAACATGTCCTGTAGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGCCCTCCAGACAGTCCTTATGCAGGAGGGGTGTTTTTAGTTACTATTCACTTTCCTCCC
GATTATCCTTTTTGGCACCGAATCTTACATATCTGGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGATGGTTTTTTTTTTTGTCATCCTTCAAAATGTCCTATATTAATAGTTTTCTTCCTTCTTCTTTTTTTTGGAAATAGCATTGTCCCTCTTATATATCTCAGACT
TTCCCATCAATTTAGCCGTTCCTTGTTACCATCCATGGCGTCGAAGCGGATCCTGAAGGAGCTCAATCGCGCGTTCGGTGTTCTTCCTTCACTATGTTGTTCTTGTTATG
TAACATGTCCTGTAGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGCCCTCCAGACAGTCCTTATGCAGGAGGGGTGTTTTTAGTTACTATTCACTTTCCTCCC
GATTATCCTTTTTGGCACCGAATCTTACATATCTGGCTATAG
Protein sequenceShow/hide protein sequence
MGDGFFFCHPSKCPILIVFFLLLFFGNSIVPLIYLRLSHQFSRSLLPSMASKRILKELNRAFGVLPSLCCSCYVTCPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP
DYPFWHRILHIWL