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Sed0015201 (gene) of Chayote v1 genome

Gene IDSed0015201
OrganismSechium edule (Chayote v1)
DescriptionTranslocase subunit seca
Genome locationLG11:31506035..31507128
RNA-Seq ExpressionSed0015201
SyntenySed0015201
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601783.1 hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sororia]2.2e-4459.54Show/hide
Query:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN
        MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ ANDAL+LL  KGGC L++F+S  T+LAS PP+L G+PP RVAN
Subjt:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN

Query:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        PLIQDARF               A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Subjt:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

KAG7032498.1 hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]4.4e-4560.12Show/hide
Query:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN
        MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ ANDAL+LL  KGGC L++F+S ST+LAS PP+L G+PP RVAN
Subjt:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN

Query:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        PLIQDARF               A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Subjt:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

XP_022923501.1 uncharacterized protein LOC111431174 [Cucurbita moschata]1.2e-4560.69Show/hide
Query:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN
        MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ ANDAL+LL FKGGC L++F+S ST+LAS PP+L G+PP RVAN
Subjt:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN

Query:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        PLIQDARF               A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Subjt:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

XP_022971782.1 uncharacterized protein LOC111470460 [Cucurbita maxima]9.8e-4559.54Show/hide
Query:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN
        MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ N T N+NPF  RFDS+ ANDAL+LL FKGGC L++F S ST+LAS PP+L G+PP RVAN
Subjt:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN

Query:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        PLIQDARF               A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Subjt:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

XP_023538993.1 uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo]7.5e-4560.12Show/hide
Query:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN
        MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ ANDAL+LL FK GC L++F+S ST+LAS PP+L G+PP RVAN
Subjt:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN

Query:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        PLIQDARF               A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Subjt:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

TrEMBL top hitse value%identityAlignment
A0A0A0KRF1 Uncharacterized protein1.5e-3858.49Show/hide
Query:  VHEEMQSAAAN-RGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF-----
        V EEMQ+AA + R R+VCPKP R G+ N T N+NPF  RFDS    DAL+LL  KGGCGL++F+S + +LAS PP+  GSPP RVANPLIQDARF     
Subjt:  VHEEMQSAAAN-RGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF-----

Query:  ---------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
                 A+PP  PP S G KGG VR  FG NP VRI GFDC LD ER+NRSI A A
Subjt:  ---------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

A0A1S3CR46 uncharacterized protein LOC1035033852.5e-3858.49Show/hide
Query:  VHEEMQSAAAN-RGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF-----
        V EEM+SAA + R R+VCPKP R G+ N T N+NPF  RFDS    DA++LL  KGGCGL+ F+S +T+LAS  P+  GSPP RVANPLIQDARF     
Subjt:  VHEEMQSAAAN-RGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF-----

Query:  ---------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
                 A+PP  PP S G KGG VR  FGNNP VRI GFDC LD ER+NRSI A A
Subjt:  ---------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

A0A5D3C147 Uncharacterized protein4.7e-3758.06Show/hide
Query:  MQSAAAN-RGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF---------
        M+SAA + R R+VCPKP R G+ N T N+NPF  RFDS    DA++LL  KGGCGL+ F+S +T+LAS  P+  GSPP RVANPLIQDARF         
Subjt:  MQSAAAN-RGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF---------

Query:  -----AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
             A+PP  PP S G KGG VR  FGNNP VRI GFDC LD ER+NRSI A A
Subjt:  -----AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

A0A6J1E6Z2 uncharacterized protein LOC1114311745.6e-4660.69Show/hide
Query:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN
        MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ ANDAL+LL FKGGC L++F+S ST+LAS PP+L G+PP RVAN
Subjt:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN

Query:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        PLIQDARF               A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Subjt:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

A0A6J1I2X1 uncharacterized protein LOC1114704604.7e-4559.54Show/hide
Query:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN
        MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ N T N+NPF  RFDS+ ANDAL+LL FKGGC L++F S ST+LAS PP+L G+PP RVAN
Subjt:  MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVAN

Query:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        PLIQDARF               A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Subjt:  PLIQDARF---------------AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein4.1e-1735.39Show/hide
Query:  MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTVNN------NPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPC
        MN   +Q N F       + +  R  V+CPKP R G  N   +       N   +  +S   ++ L+ +  KGG G        T + +PP F  GSPP 
Subjt:  MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTVNN------NPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPC

Query:  RVANPLIQDARF-------AAPPP-------PPPHSTGWKGGFV--RSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        RV+NPL +D+ F       A+P P       P P S+   G  V   + FGNNPVVR+VGFDC  D    NRSI+  A
Subjt:  RVANPLIQDARF-------AAPPP-------PPPHSTGWKGGFV--RSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

AT1G13390.2 unknown protein4.1e-1735.39Show/hide
Query:  MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTVNN------NPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPC
        MN   +Q N F       + +  R  V+CPKP R G  N   +       N   +  +S   ++ L+ +  KGG G        T + +PP F  GSPP 
Subjt:  MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTVNN------NPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPC

Query:  RVANPLIQDARF-------AAPPP-------PPPHSTGWKGGFV--RSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        RV+NPL +D+ F       A+P P       P P S+   G  V   + FGNNPVVR+VGFDC  D    NRSI+  A
Subjt:  RVANPLIQDARF-------AAPPP-------PPPHSTGWKGGFV--RSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

AT1G68490.1 unknown protein4.7e-2139.89Show/hide
Query:  MNRAAVQINMFSVHEEMQSAAA-----NRGRVVCPKPLRAGITNTTVNNNP-------FSQRF---DSLVANDALNLLCFKGGCGLDHFSSFSTELASPP
        MN  AVQ N F+   +++S++      ++  VVCPKP R G+ N   +++P       FS +    +S    D L+++  K G G +  +     + SP 
Subjt:  MNRAAVQINMFSVHEEMQSAAA-----NRGRVVCPKPLRAGITNTTVNNNP-------FSQRF---DSLVANDALNLLCFKGGCGLDHFSSFSTELASPP

Query:  PFLYGSPPCRVANPLIQDARF---------AAPP----PP---PPHSTGWKGG-FVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA
        PFL GSPP RVANPL QDARF           PP    PP   P  S+G KGG  VR  FGN+P VR+ GFD CLD + +N SI A A
Subjt:  PFLYGSPPCRVANPLIQDARF---------AAPP----PP---PPHSTGWKGG-FVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

AT3G02555.1 unknown protein2.5e-1438.24Show/hide
Query:  MNRAAVQINMFSVHEEMQSAAANRGR----VVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRV
        MN  ++Q N F   EE +            VVCPKP RA   N  +   PF   F    A+D  +     G   LD F    +  +  PPF  GSPP R 
Subjt:  MNRAAVQINMFSVHEEMQSAAANRGR----VVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRV

Query:  ANPLIQDARF-------AAPPPPP--PHSTGWKGGFVRSKFGNNP-VVRIVGFDCCLDMERQNRSITAPA
        ANPL QDARF        +P   P  P ++  K G  R KFG  P  VR+ GFD CL+ +R N SI A A
Subjt:  ANPLIQDARF-------AAPPPPP--PHSTGWKGGFVRSKFGNNP-VVRIVGFDCCLDMERQNRSITAPA

AT5G16110.1 unknown protein1.3e-1535.14Show/hide
Query:  MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTV-------NNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPP
        MN   +Q N F   EEM      +  VVCPKP R G+    V        +   +   DS    + L ++  K   G     +    L+S PP+  GSPP
Subjt:  MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTV-------NNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPP

Query:  CRVANPLIQDARF---------------------AAPPPPPPHSTGWKGGFVRSKFG-NNPVVRIVGFDCCLDMERQNRSITAPA
         R ANPL QDARF                       P P    S+    G VR KFG N+P VR+ GFD CL+ +RQN SI A A
Subjt:  CRVANPLIQDARF---------------------AAPPPPPPHSTGWKGGFVRSKFG-NNPVVRIVGFDCCLDMERQNRSITAPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCGGGCGGCGGTTCAAATCAACATGTTTTCCGTTCATGAAGAGATGCAGAGCGCCGCCGCCAACCGTGGACGAGTGGTTTGCCCGAAGCCCCTCCGTGCCGGAAT
AACTAACACCACCGTCAACAACAACCCATTTAGTCAACGCTTTGATTCCTTAGTTGCCAACGATGCTCTGAATCTCCTCTGTTTTAAGGGAGGTTGTGGATTGGATCATT
TTAGCAGTTTTAGTACAGAATTAGCATCGCCGCCGCCGTTTTTATATGGGTCGCCGCCGTGTAGAGTTGCTAACCCGTTAATCCAAGACGCCCGGTTTGCGGCTCCTCCG
CCGCCGCCGCCGCACTCGACCGGTTGGAAGGGCGGTTTTGTTCGGTCTAAATTTGGTAATAACCCGGTGGTGAGAATCGTGGGGTTCGATTGCTGCCTAGACATGGAGAG
GCAAAACCGTAGCATCACGGCCCCGGCTTAA
mRNA sequenceShow/hide mRNA sequence
GCAACTACTTCCCAGTTTTTTAAGCTTAAACATGATTGAGTTAAGAAAATTTTAAAAAAAAGCACAGAAATTTTCAAGAAATGAGTTGATTTTTAATATCTTTATACAAA
ATCTCTTGGGTATTTTTATTTTGTTCTTGACCTTAATTTTTTTTTATGACTGCTTAATTAGTACCGATTCTCAGCTTGAAATTGATGTGTTTGACCAAATATACTTAATC
CCCTGTTTTTTATCTCTCAATTTTCTTGAAAAAAATTCTATCTTTTTGTTTCTTACATCTAAATAAGCCCGTTTTCTTATCTTTCATAACAGAAAGAAAAGAATTTTAGT
AGACGATGAACCGGGCGGCGGTTCAAATCAACATGTTTTCCGTTCATGAAGAGATGCAGAGCGCCGCCGCCAACCGTGGACGAGTGGTTTGCCCGAAGCCCCTCCGTGCC
GGAATAACTAACACCACCGTCAACAACAACCCATTTAGTCAACGCTTTGATTCCTTAGTTGCCAACGATGCTCTGAATCTCCTCTGTTTTAAGGGAGGTTGTGGATTGGA
TCATTTTAGCAGTTTTAGTACAGAATTAGCATCGCCGCCGCCGTTTTTATATGGGTCGCCGCCGTGTAGAGTTGCTAACCCGTTAATCCAAGACGCCCGGTTTGCGGCTC
CTCCGCCGCCGCCGCCGCACTCGACCGGTTGGAAGGGCGGTTTTGTTCGGTCTAAATTTGGTAATAACCCGGTGGTGAGAATCGTGGGGTTCGATTGCTGCCTAGACATG
GAGAGGCAAAACCGTAGCATCACGGCCCCGGCTTAAAAATCGAACCCAACCGAACCGTGGGTCGGTTCAACAATGGTGATAAAGAACACATGGGTTTAAGGTTATTAAAT
TTTTCTTTTTCCATAAATTCAAAATTTTAATTTAAAGTGAAATGTTTGAAAAAAAAAGTATCTTTTTGACCAGAACTCCATTATTGTAAATCATGTGAAATAGAAATCAA
AGTAAATATGATGTGAAGAAAAAGGGGGG
Protein sequenceShow/hide protein sequence
MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARFAAPP
PPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA