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Sed0015208 (gene) of Chayote v1 genome

Gene IDSed0015208
OrganismSechium edule (Chayote v1)
Descriptionchaperone protein dnaJ 20, chloroplastic-like
Genome locationLG04:35183706..35186090
RNA-Seq ExpressionSed0015208
SyntenySed0015208
Gene Ontology termsNA
InterPro domainsIPR001623 - DnaJ domain
IPR036869 - Chaperone J-domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574846.1 Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2658.52Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFYELLGVPE GSMVEI    KQMA KYHP                 VQEAYETLSDP MR LYD DMARGLHLAFSARRR  NHE             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
              EM+EK  W +RWQDQLSEL RRS NK+SR
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
XP_022959157.1 chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata]1.4e-2658.52Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFYELLGVPE GSMVEI    KQMA KYHP                 VQEAYETLSDP MR LYD DMARGLHLAFSARRR  NHE             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
              EM+EK  W +RWQDQLSEL RRS NK+SR
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
XP_023006292.1 chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima]6.5e-2759.26Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFYELLGVPE GSMVEI    KQMA KYHP                 VQEAYETLSDP MR LYD DMARGLHLAFSARRR  NHE             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
              EMEEK  W +RWQDQLSEL RRS NK+SR
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
XP_023549024.1 chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo]1.7e-2760Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFYELLGVPE GSMVEI    KQMA KYHP                 VQEAYETLSDP MR LYD DMARGLHLAFSARRR  NHE             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
              EMEEK  W NRWQDQLSEL RRS NK+SR
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
XP_038875872.1 chaperone protein dnaJ 20, chloroplastic-like [Benincasa hispida]1.0e-2760Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        MSFYE+LGVPE GSMVEI    KQMALKYHP                 VQEAYETLSDP MRALYD+DMA GLHLAFSARRR  NHE             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
              EMEEKS W NRW+DQLS L +RS NKDSR
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
TrEMBL top hitse value%identityAlignment
A0A1S3C500 chaperone protein dnaJ 20, chloroplastic-like6.5e-2555.56Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHPAV----------------QEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFYELLGVPE GSM+EI    KQMALKYHP V                QEAYETLSDP MRALYD D+ARGL  AFS+R+R  +HE             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHPAV----------------QEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
              EMEEKS W NRWQDQLS L RRS N+DS+
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
A0A5A7SVL1 Chaperone protein dnaJ 206.5e-2555.56Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHPAV----------------QEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFYELLGVPE GSM+EI    KQMALKYHP V                QEAYETLSDP MRALYD D+ARGL  AFS+R+R  +HE             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHPAV----------------QEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
              EMEEKS W NRWQDQLS L RRS N+DS+
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
A0A6J1CE65 chaperone protein dnaJ 20, chloroplastic-like3.5e-2656.74Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFYELLGVPE GS+VEI    KQMA KYHP                 VQEAYETLSDP  RALYD DMARGLHLAFSARRR +N E             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSREQTCRG
              +MEEKS W NRW+DQLSEL RRS  KDSRE    G
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSREQTCRG
A0A6J1H3S2 chaperone protein dnaJ 20, chloroplastic-like7.0e-2758.52Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFYELLGVPE GSMVEI    KQMA KYHP                 VQEAYETLSDP MR LYD DMARGLHLAFSARRR  NHE             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
              EM+EK  W +RWQDQLSEL RRS NK+SR
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
A0A6J1KVG4 chaperone protein dnaJ 20, chloroplastic-like3.1e-2759.26Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFYELLGVPE GSMVEI    KQMA KYHP                 VQEAYETLSDP MR LYD DMARGLHLAFSARRR  NHE             
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
              EMEEK  W +RWQDQLSEL RRS NK+SR
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDSR
SwissProt top hitse value%identityAlignment
Q9SDN0 Chaperone protein dnaJ 20, chloroplastic9.1e-1641.79Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFY+LLGV E  ++ EI    KQ+A KYHP                 VQEAYETLSDP  R LYD D++ G   +FS RR        QN++  ++   
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDS
               +EEKS W  +WQ QLS L RRS  KD+
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDS
Arabidopsis top hitse value%identityAlignment
AT4G13830.1 DNAJ-like 205.3e-1144.32Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEV
        +SFY+LLGV E  ++ EI    KQ+A KYHP                 VQEAYETLSDP  R LYD D++ G   +FS RR++   +V
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEV
AT4G13830.2 DNAJ-like 206.5e-1741.79Show/hide
Query:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP
        +SFY+LLGV E  ++ EI    KQ+A KYHP                 VQEAYETLSDP  R LYD D++ G   +FS RR        QN++  ++   
Subjt:  MSFYELLGVPEFGSMVEI----KQMALKYHP----------------AVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTP

Query:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDS
               +EEKS W  +WQ QLS L RRS  KD+
Subjt:  AYNSAHEMEEKSAWTNRWQDQLSELMRRSTNKDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTTACGAGCTCTTAGGAGTACCGGAGTTCGGATCGATGGTGGAGATTAAGCAGATGGCTCTGAAGTATCATCCGGCTGTTCAGGAGGCGTACGAGACGTTGTC
CGATCCTTGTATGAGAGCTTTGTATGATACAGACATGGCGAGAGGTCTTCATCTTGCTTTCTCTGCTCGTAGGCGTAGTAACAACCATGAGGTGCATCAGAACAAGTTTA
TGGACCAAATCATGACTCCTGCATATAACTCAGCACACGAAATGGAAGAGAAAAGTGCATGGACAAATCGTTGGCAGGATCAACTATCCGAATTGATGAGAAGAAGCACG
AACAAAGATTCGAGAGAGCAAACATGTCGTGGGGAGCCCGAATGCGCAGGCAATGGGACGAGCTTCGCGAGGATGCATAATTTGGTTTTTCCCTTGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTTTACGAGCTCTTAGGAGTACCGGAGTTCGGATCGATGGTGGAGATTAAGCAGATGGCTCTGAAGTATCATCCGGCTGTTCAGGAGGCGTACGAGACGTTGTC
CGATCCTTGTATGAGAGCTTTGTATGATACAGACATGGCGAGAGGTCTTCATCTTGCTTTCTCTGCTCGTAGGCGTAGTAACAACCATGAGGTGCATCAGAACAAGTTTA
TGGACCAAATCATGACTCCTGCATATAACTCAGCACACGAAATGGAAGAGAAAAGTGCATGGACAAATCGTTGGCAGGATCAACTATCCGAATTGATGAGAAGAAGCACG
AACAAAGATTCGAGAGAGCAAACATGTCGTGGGGAGCCCGAATGCGCAGGCAATGGGACGAGCTTCGCGAGGATGCATAATTTGGTTTTTCCCTTGACTTAAAGCATGCA
TACATTGTTGATATGATACACACTAGCTATGCTAGATACAGGAGCATAAGTAGCCATGTTTACTTTATACACTTTTAGCCTACTGATTACTAGTTCTACTTCTTCTGTGA
AACTCAAATTGTTTTGTCTGAAAATTGGGAATTTGGTCCACAGGGAATGTAAAATCACTAGCAAATTAGTATTGAATGTGTATATATGGCAG
Protein sequenceShow/hide protein sequence
MSFYELLGVPEFGSMVEIKQMALKYHPAVQEAYETLSDPCMRALYDTDMARGLHLAFSARRRSNNHEVHQNKFMDQIMTPAYNSAHEMEEKSAWTNRWQDQLSELMRRST
NKDSREQTCRGEPECAGNGTSFARMHNLVFPLT