CuGenDBv2

Gene ID	Sed0015213
Organism	Sechium edule (Chayote v1)
Description	Hydroxyproline-rich glycoprotein family protein
Genome location	LG10:5677950..5679245
RNA-Seq Expression	Sed0015213
Synteny	Sed0015213
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR037699 - Uncharacterized protein At5g65660-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022133072.1 uncharacterized protein At5g65660 [Momordica charantia]

3.5e-46

74.1

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Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH---PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKF
        M+S D SPPH+DASRPSLGFPLGTALLLLVIFTLSG+FSCCYHWDKLRSLRR+++      PH   PSSPSKS    LDLE N R+SLSVLMPGD IPKF
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH---PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKF

Query:  IAMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        IAMPCPREPPRPE +++KVEKPPK      PPRIAVP Y
Subjt:  IAMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

XP_022962719.1 uncharacterized protein At5g65660-like [Cucurbita moschata]

3.7e-48

75.36

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Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI
        M++ D SPPH+DASRPSLGFPLGTALLLLVIFTLSG+FSCCYHWDKLRS+RR++A     D H  PSSPSKS ST LDLEKN RESLSV+MPGD IPKFI
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI

Query:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        AMPCPREPPRPE + +KVEKPPK      PPRIA+P Y
Subjt:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

XP_022979056.1 uncharacterized protein At5g65660-like [Cucurbita maxima]

3.1e-47

78.68

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Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAM
        M+S D SPPH+DASRPSL FPLGTALLLLVIFTLSG+FSCCYHWDKLRSLRR SAS+     +P+SPSK T T LDLEKN R+SLSV+MPGD IPKFIAM
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAM

Query:  PCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        PCPREPPRPE VE+KVEKPPK    PPPPRIAVP Y
Subjt:  PCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

XP_023003846.1 uncharacterized protein At5g65660-like [Cucurbita maxima]

1.8e-47

74.64

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Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI
        M++ D SPPH+DASRPSLGFPLGTALLLLVIFTLSG+FSCCYHWDKLRS+RR++A     D H  PSSPSKS ST LDLEKN RESLSV+MPGD IPKFI
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI

Query:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        AMPCPREPPRPE +++ VEKPPK      PPRIA+P Y
Subjt:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

XP_023518276.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]

8.2e-48

74.64

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Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI
        M++ D SPPH+DASRPSLGFPLGTALLLLVIFTLSG+FSCCYHWDKLRS+RR++A     D H  PSSPSKS  T LDLEKN RESLSV+MPGD IPKFI
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI

Query:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        AMPCPREPPRPE +++KVEKPPK      PPRIA+P Y
Subjt:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BVL2 uncharacterized protein At5g65660

1.7e-46

74.1

Show/hide

Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH---PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKF
        M+S D SPPH+DASRPSLGFPLGTALLLLVIFTLSG+FSCCYHWDKLRSLRR+++      PH   PSSPSKS    LDLE N R+SLSVLMPGD IPKF
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH---PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKF

Query:  IAMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        IAMPCPREPPRPE +++KVEKPPK      PPRIAVP Y
Subjt:  IAMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

A0A6J1GCM8 uncharacterized protein At5g65660-like

2.4e-45

77.61

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Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAM
        M+S D SPPH+DASRPSL FPLGTALLLLVIFTLSG+FSCCYHWDKLRSLRR SAS+     +P+SPSK T T LDLEKN R+SLSV+MPGD IPKFIAM
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAM

Query:  PCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVP
        PCPREPPRPE VE+KVEKPPK      PPRIAVP
Subjt:  PCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVP

A0A6J1HHX0 uncharacterized protein At5g65660-like

1.8e-48

75.36

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Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI
        M++ D SPPH+DASRPSLGFPLGTALLLLVIFTLSG+FSCCYHWDKLRS+RR++A     D H  PSSPSKS ST LDLEKN RESLSV+MPGD IPKFI
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI

Query:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        AMPCPREPPRPE + +KVEKPPK      PPRIA+P Y
Subjt:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

A0A6J1IPP8 uncharacterized protein At5g65660-like

1.5e-47

78.68

Show/hide

Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAM
        M+S D SPPH+DASRPSL FPLGTALLLLVIFTLSG+FSCCYHWDKLRSLRR SAS+     +P+SPSK T T LDLEKN R+SLSV+MPGD IPKFIAM
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAM

Query:  PCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        PCPREPPRPE VE+KVEKPPK    PPPPRIAVP Y
Subjt:  PCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

A0A6J1KQE2 uncharacterized protein At5g65660-like

8.9e-48

74.64

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Query:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI
        M++ D SPPH+DASRPSLGFPLGTALLLLVIFTLSG+FSCCYHWDKLRS+RR++A     D H  PSSPSKS ST LDLEKN RESLSV+MPGD IPKFI
Subjt:  MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPH--PSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFI

Query:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        AMPCPREPPRPE +++ VEKPPK      PPRIA+P Y
Subjt:  AMPCPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

SwissProt top hits

e value

%identity

Alignment

Q9LSK9 Uncharacterized protein At5g65660

8.6e-32

57.04

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Query:  DSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAMP
        ++ D SPPH DASRPSLGFPLGTALLL++IF+LSG+FSCCYHWDK RSLRR+ A+        S+P K      +++K    S+ VLMPGD  PKFIA+P
Subjt:  DSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAMP

Query:  CPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        CP  PPRPE + + V+ PP+  PP  P R  VPLY
Subjt:  CPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

Arabidopsis top hits

e value

%identity

Alignment

AT5G65660.1 hydroxyproline-rich glycoprotein family protein

6.1e-33

57.04

Show/hide

Query:  DSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAMP
        ++ D SPPH DASRPSLGFPLGTALLL++IF+LSG+FSCCYHWDK RSLRR+ A+        S+P K      +++K    S+ VLMPGD  PKFIA+P
Subjt:  DSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAMP

Query:  CPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY
        CP  PPRPE + + V+ PP+  PP  P R  VPLY
Subjt:  CPREPPRPEFVELKVEKPPKPPPPPPPPRIAVPLY

Sequences

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CDS sequence

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ATGGATTCTCACGATGTCTCCCCTCCTCACTCCGACGCATCCAGACCCTCCCTAGGGTTTCCCCTCGGCACCGCCCTCCTCCTCCTCGTCATCTTCACCCTCAGCGGAGT
CTTCTCCTGCTGCTACCACTGGGACAAGCTCCGATCCCTCCGCCGCGCCTCCGCTTCCCGATCCGACATCGATCCCCACCCTTCCTCTCCCTCCAAATCCACCTCCACTC
CCCTGGATTTGGAGAAGAATGGAAGAGAAAGTTTATCGGTGCTTATGCCTGGGGATTTGATTCCGAAATTCATAGCTATGCCGTGCCCTAGAGAGCCGCCGCGGCCGGAA
TTCGTTGAACTGAAGGTCGAGAAACCACCGAAGCCGCCGCCGCCACCACCGCCGCCGCGGATTGCAGTTCCTTTATATTAA

mRNA sequence

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TTCATCTGGCATTACAGTTTTTTGTTAATTTCCTATGACACATTCCATATGGATTCTCACGATGTCTCCCCTCCTCACTCCGACGCATCCAGACCCTCCCTAGGGTTTCC
CCTCGGCACCGCCCTCCTCCTCCTCGTCATCTTCACCCTCAGCGGAGTCTTCTCCTGCTGCTACCACTGGGACAAGCTCCGATCCCTCCGCCGCGCCTCCGCTTCCCGAT
CCGACATCGATCCCCACCCTTCCTCTCCCTCCAAATCCACCTCCACTCCCCTGGATTTGGAGAAGAATGGAAGAGAAAGTTTATCGGTGCTTATGCCTGGGGATTTGATT
CCGAAATTCATAGCTATGCCGTGCCCTAGAGAGCCGCCGCGGCCGGAATTCGTTGAACTGAAGGTCGAGAAACCACCGAAGCCGCCGCCGCCACCACCGCCGCCGCGGAT
TGCAGTTCCTTTATATTAACAGATTCGGATTGGTTGATTGATATTGATCTGTTTTGTGTGTATAGTTAGTAGATCAATTCTTTTTCACTTTCATCTGTTTGTTATCTGCT
CTTTCGAAAATGAAATTTCGATGTGTATTTTTTTTTTCAACCACTTTCCTCTCCTCTGCTTCTCGCCACTTGCAAACTTACAATTGGAAAAAGCACAAAAAAAAAAAAAC
AATGTTCAGAAAAATAATTCCGTTGTAAACCAGTTCAACATCAGATTCACATGTTACTAAGAATCAATATTTGTCCCTCTTTTTTTAA

Protein sequence

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MDSHDVSPPHSDASRPSLGFPLGTALLLLVIFTLSGVFSCCYHWDKLRSLRRASASRSDIDPHPSSPSKSTSTPLDLEKNGRESLSVLMPGDLIPKFIAMPCPREPPRPE
FVELKVEKPPKPPPPPPPPRIAVPLY

Sed0015213 (gene) of Chayote v1 genome