; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0015223 (gene) of Chayote v1 genome

Gene IDSed0015223
OrganismSechium edule (Chayote v1)
DescriptionDUF1713 domain-containing protein
Genome locationLG06:4143039..4153998
RNA-Seq ExpressionSed0015223
SyntenySed0015223
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
InterPro domainsIPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056277.1 DUF1713 domain-containing protein [Cucumis melo var. makuwa]2.1e-4579.23Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQKLIRKS P+R+IAALG QTSQNLSTP+ILHQPLD + K + H  SN NS STS PS FSQFYPSFPFG CLPQI STGL+PFE   VE DDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
KAE8650785.1 hypothetical protein Csa_017463 [Cucumis sativus]4.3e-4680Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQ LIRKS PTR+IAALG QTSQNLSTP+ILHQPLD + K + H  SN NS STS PSHFSQFYPSFPFG CLPQI STGL+PFE   VE DDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
KAG7017804.1 hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4578.46Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQKL+RKS PTR+IAALGTQTSQN   PYILHQPLD + K + H DSN NS+STS PSHFS FYPSFPFGFCLPQI S+G++PFE   VE DDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_011651574.1 uncharacterized protein LOC101220058 [Cucumis sativus]4.3e-4680Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQ LIRKS PTR+IAALG QTSQNLSTP+ILHQPLD + K + H  SN NS STS PSHFSQFYPSFPFG CLPQI STGL+PFE   VE DDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_022934588.1 uncharacterized protein LOC111441723 [Cucurbita moschata]1.6e-4578.46Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQKL+RKS PTR+IAALGTQTSQN   PYILHQPLD + K + H DSN NS+STS PSHFS FYPSFPFGFCLPQI S+G++PFE   VE DDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
TrEMBL top hitse value%identityAlignment
A0A0A0LDP0 DUF1713 domain-containing protein2.1e-4680Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQ LIRKS PTR+IAALG QTSQNLSTP+ILHQPLD + K + H  SN NS STS PSHFSQFYPSFPFG CLPQI STGL+PFE   VE DDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A5A7UNU9 DUF1713 domain-containing protein1.0e-4579.23Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQKLIRKS P+R+IAALG QTSQNLSTP+ILHQPLD + K + H  SN NS STS PS FSQFYPSFPFG CLPQI STGL+PFE   VE DDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1EJL0 uncharacterized protein LOC1114351911.7e-4377.69Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQKLIRKS PTR IAAL +QTSQNLS PYILHQPLD + K +GH DSN N++STS PS FS F+PSFPFG CL QI STG I FE   VEDDDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1F832 uncharacterized protein LOC1114417238.0e-4678.46Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQKL+RKS PTR+IAALGTQTSQN   PYILHQPLD + K + H DSN NS+STS PSHFS FYPSFPFGFCLPQI S+G++PFE   VE DDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1J7I5 uncharacterized protein LOC1114824612.6e-4476.92Show/hide
Query:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK
        MA+ LQKL+RKS PTR+IAALGTQTSQN   PYILHQPLD + K + H DSN NS+STS  SHF  FYPSFPFGFCLPQI S+G++PFE   VE DDSRK
Subjt:  MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRK

Query:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +WADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63150.1 unknown protein6.5e-0852.17Show/hide
Query:  QFYPSFPFGFCLPQIPSTGLIPFEVGVV--EDDDSRK--IWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +FYPSF  G CL      GL   E   +  E++D+++  I+ADSVKKKRK+KMNKHKY+KLRK+L R++
Subjt:  QFYPSFPFGFCLPQIPSTGLIPFEVGVV--EDDDSRK--IWADSVKKKRKRKMNKHKYKKLRKRLRRQT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGAATCTTCAAAAGCTCATCAGAAAATCGCAACCCACAAGAATAATCGCCGCATTGGGCACCCAAACCTCGCAAAATCTCTCAACGCCCTACATTCTCCACCA
GCCGCTCGATCCAAACAATAAACAAAACGGGCATTTCGATTCCAATTCAAACTCTATTTCTACTTCGATTCCATCTCACTTTTCGCAGTTTTACCCTTCTTTTCCATTTG
GGTTTTGCCTGCCGCAAATCCCCTCAACTGGGTTGATTCCATTCGAGGTGGGTGTTGTTGAGGATGATGATTCTCGGAAGATTTGGGCTGATAGTGTGAAGAAGAAGAGG
AAGCGAAAGATGAACAAGCATAAGTACAAGAAGCTAAGGAAGAGGCTTCGGAGGCAGACGTAG
mRNA sequenceShow/hide mRNA sequence
CTTAGGTTAGTGGCGCTGTTTATTCTTCCACATTCGAAGAAGTTCATTCTCTTCTCCATCTCCATCACCGAATCATTCCAGAAGTTTCAGCTTAAAATTCAGTGTTTCAA
AACCTTCAATCTGTTTCAATGGCGACGAATCTTCAAAAGCTCATCAGAAAATCGCAACCCACAAGAATAATCGCCGCATTGGGCACCCAAACCTCGCAAAATCTCTCAAC
GCCCTACATTCTCCACCAGCCGCTCGATCCAAACAATAAACAAAACGGGCATTTCGATTCCAATTCAAACTCTATTTCTACTTCGATTCCATCTCACTTTTCGCAGTTTT
ACCCTTCTTTTCCATTTGGGTTTTGCCTGCCGCAAATCCCCTCAACTGGGTTGATTCCATTCGAGGTGGGTGTTGTTGAGGATGATGATTCTCGGAAGATTTGGGCTGAT
AGTGTGAAGAAGAAGAGGAAGCGAAAGATGAACAAGCATAAGTACAAGAAGCTAAGGAAGAGGCTTCGGAGGCAGACGTAGTTGCTGTAGTTGGTTGGAACTGATGGGAC
TTGAGAGGCTAGAAAGAGTTTTCCTTTTATGCCCCTTTACCGATGAGTCGATATGACTAAAGTCGAACAATTCTTGCCCTTTTTTAAGTTTAAAGATAATAAAATTGATG
GATTCAAGTTTATGACTTTTTAATTTATGTTTGTGCACACACTTAAGCTCATCTGTTGAGTTATTGCTTTTGTTGGCTGTCCATTTGATGTAATTTTTTTTTAGAGGGA
Protein sequenceShow/hide protein sequence
MATNLQKLIRKSQPTRIIAALGTQTSQNLSTPYILHQPLDPNNKQNGHFDSNSNSISTSIPSHFSQFYPSFPFGFCLPQIPSTGLIPFEVGVVEDDDSRKIWADSVKKKR
KRKMNKHKYKKLRKRLRRQT