CuGenDBv2

Gene ID	Sed0015226
Organism	Sechium edule (Chayote v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
Genome location	LG07:7644794..7647820
RNA-Seq Expression	Sed0015226
Synteny	Sed0015226
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044970 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6574156.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-131

86.27

Show/hide

Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        ILSP+PLIRL+ T +FRAK  SK+  I+ARLDDSKNSPN +QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNS+APIT AQLRTE LGI
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFL+GAVPSGEA LPE AEQIFVLSQ+VSDNVK+DLAWATYI LRNTNSISVLIQIQGELCVRGYWNSPNDISGA+LLAWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSALN+ LYFPQISES LWQMLPKGTRSVLVQPV QN  Q+ NEME IGGFIL+ASSLSYAFS+KDRAWIRALA+KFD+ D+
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

KAG7013210.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

9.7e-131

85.92

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Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        ILSP+PLIRL+ T +FR K  SK+  I+ARLDDSKNSPN +QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNS+APIT AQLRTE LGI
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFL+GAVPSGEA LPE AEQIFVLSQ+VSDNVK+DLAWATYI LRNTNSISVLIQIQGELCVRGYWNSPNDISGA+LLAWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSALN+ LYFPQISES LWQMLPKGTRSVLVQPV QN  Q+ NEME IGGFIL+ASSLSYAFS+KDRAWIRALA+KFD+ D+
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

XP_022945332.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata]

1.9e-131

86.27

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Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        ILSP+PLIRL+ TP+FRAK  SK+  I+ARLDDSKNSP+ +QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+S+APIT AQLRTE LGI
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFL+GAVPSGEA LPE AEQIFVLSQ+VSDNVK+DLAWATYI LRNTNSISVLIQIQGELCVRGYWNSPNDISGA+LLAWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSALN+ LYFPQISES LWQMLPKGTRSVLVQPV QN  Q+ NEME IGGFIL+ASSLSYAFS+KDRAWIRALA+KFD+ DI
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

XP_022968395.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucurbita maxima]

1.3e-130

86.27

Show/hide

Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        ILSP+PLIRL+ TP+FRAK  SK+  I+ARLDDSKNSPN +QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+S+APIT AQLRTE LGI
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFL+GAVPSGEA LPE AEQIFVLSQNVSDNVK+DLAWATYI LRNTNSISVLI IQGELCVRGYWNSPNDISGA+LLAWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSALN+ LYFPQISES LWQML KGTRSVLVQPV QN  Q+ NEME IGGFIL+ASSLSYAFS+KDRAWIRALA+KFD+ DI
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

XP_023542853.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo]

1.1e-131

86.62

Show/hide

Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        ILSP+PLIRL+ T +FRAK  SK+  I+ARLDDSKNSPN +QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNS+APIT AQLRTE LGI
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFL+GAVPSGEA LPE AEQIFVLSQNVSDNVK+DLAWATYI LRNTNSISVLIQIQGELCVRGYWNSPNDISG +LLAWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSALN+ LYFPQISES LWQMLPKGTRSVLVQPV QN  Q+ NEME IGGFIL+ASSLSYAFS+KDRAWIRALA+KFD+ DI
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DSW9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

3.2e-124

82.75

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Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        I SP+PL +L     FRAK + K   ISARLDDSKNS N QQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNS+A  TPAQLRTE LGI
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFLKGAVPSGEA LPE  EQIF+LSQ VSDN+KED+AWATYI LRNTNSISVLIQ QG LCVRGYWNSPNDIS A+LLAWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSAL + +YFPQISES LWQMLPKGTRSVLVQPVVQN  Q+ NEME +GGFILLASSLSYAFS+KDRAWIRALA+KFDD+ I
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

A0A6J1CJH9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

7.5e-129

84.86

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Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        ILSPNPLIRL  TP+FRAK R K   +SARLDDSKNS N QQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNS+AP TPAQLRTE LG+
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFLKGAVPSGEA+LPE  EQIFVLSQNVSDNVKEDLAWATYI LRNTNSISVLIQI+GELCVRGYWNSPNDI GA+L+AWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSALN+ LYFPQIS+SELW+MLP GTRSVLVQPV     Q+ N+ME IGGFILLASSLSYAFS+KDRAWIRALA+KF D+DI
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

A0A6J1G0N4 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

9.4e-132

86.27

Show/hide

Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        ILSP+PLIRL+ TP+FRAK  SK+  I+ARLDDSKNSP+ +QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+S+APIT AQLRTE LGI
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFL+GAVPSGEA LPE AEQIFVLSQ+VSDNVK+DLAWATYI LRNTNSISVLIQIQGELCVRGYWNSPNDISGA+LLAWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSALN+ LYFPQISES LWQMLPKGTRSVLVQPV QN  Q+ NEME IGGFIL+ASSLSYAFS+KDRAWIRALA+KFD+ DI
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

A0A6J1HX31 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2

6.1e-131

86.27

Show/hide

Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        ILSP+PLIRL+ TP+FRAK  SK+  I+ARLDDSKNSPN +QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+S+APIT AQLRTE LGI
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFL+GAVPSGEA LPE AEQIFVLSQNVSDNVK+DLAWATYI LRNTNSISVLI IQGELCVRGYWNSPNDISGA+LLAWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSALN+ LYFPQISES LWQML KGTRSVLVQPV QN  Q+ NEME IGGFIL+ASSLSYAFS+KDRAWIRALA+KFD+ DI
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

A0A6J1HXW3 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

6.1e-131

86.27

Show/hide

Query:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI
        ILSP+PLIRL+ TP+FRAK  SK+  I+ARLDDSKNSPN +QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+S+APIT AQLRTE LGI
Subjt:  ILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGI

Query:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS
        SLAAFSIALPYLGKFL+GAVPSGEA LPE AEQIFVLSQNVSDNVK+DLAWATYI LRNTNSISVLI IQGELCVRGYWNSPNDISGA+LLAWF+EQLQS
Subjt:  SLAAFSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQS

Query:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI
        IGLSALN+ LYFPQISES LWQML KGTRSVLVQPV QN  Q+ NEME IGGFIL+ASSLSYAFS+KDRAWIRALA+KFD+ DI
Subjt:  IGLSALNNVLYFPQISESELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDI

SwissProt top hits

e value

%identity

Alignment

Q9FJ81 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

2.7e-83

57.25

Show/hide

Query:  NPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGISLAA
        +P   L P  Q   +I ++T       D  ++  + QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   ++SAPI+ +Q+R+E LG+SLAA
Subjt:  NPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGISLAA

Query:  FSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQSIGLS
        FSIALPY+GKFLKG+V   + +LPE+ EQ+FV+S N+ D++KEDLAWATY+ LRNT++I+VLI +QGELCVRGYWN P+ +S A L  WFK+++  IGL+
Subjt:  FSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQSIGLS

Query:  ALNNVLYFPQISESEL-WQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKF
         +   LYFPQ + S L   +LP GTRS+ VQP+VQN     NE + + GF+L+AS+  YA+S+KDRAWI A+A KF
Subjt:  ALNNVLYFPQISESEL-WQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKF

Arabidopsis top hits

e value

%identity

Alignment

AT5G52110.1 Protein of unknown function (DUF2930)

1.9e-84

57.25

Show/hide

Query:  NPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGISLAA
        +P   L P  Q   +I ++T       D  ++  + QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   ++SAPI+ +Q+R+E LG+SLAA
Subjt:  NPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGISLAA

Query:  FSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQSIGLS
        FSIALPY+GKFLKG+V   + +LPE+ EQ+FV+S N+ D++KEDLAWATY+ LRNT++I+VLI +QGELCVRGYWN P+ +S A L  WFK+++  IGL+
Subjt:  FSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQSIGLS

Query:  ALNNVLYFPQISESEL-WQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKF
         +   LYFPQ + S L   +LP GTRS+ VQP+VQN     NE + + GF+L+AS+  YA+S+KDRAWI A+A KF
Subjt:  ALNNVLYFPQISESEL-WQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKF

AT5G52110.2 Protein of unknown function (DUF2930)

1.9e-84

57.25

Show/hide

Query:  NPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGISLAA
        +P   L P  Q   +I ++T       D  ++  + QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   ++SAPI+ +Q+R+E LG+SLAA
Subjt:  NPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGISLAA

Query:  FSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQSIGLS
        FSIALPY+GKFLKG+V   + +LPE+ EQ+FV+S N+ D++KEDLAWATY+ LRNT++I+VLI +QGELCVRGYWN P+ +S A L  WFK+++  IGL+
Subjt:  FSIALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQSIGLS

Query:  ALNNVLYFPQISESEL-WQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKF
         +   LYFPQ + S L   +LP GTRS+ VQP+VQN     NE + + GF+L+AS+  YA+S+KDRAWI A+A KF
Subjt:  ALNNVLYFPQISESEL-WQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCATGATTCTCTCTCCCAACCCGTTAATTCGGTTGGCACCCACTCCCCAATTTCGCGCTAAAATTAGGTCAAAAACTCATCCAATCTCTGCTCGTCTCGACGATTC
CAAGAACTCACCTAATCACCAGCAACTCAATCTCTCCGTTCTTCGCTTCACGCTCGGGATTCCTGGATTGGACGAATCTTACTTGCCCAGATGGATTGGATATGGATTTG
GGTCGCTTCTGCTTTTGAATCACTTTGTTGGCTCCAACTCATCGGCTCCCATCACCCCGGCACAGTTAAGAACTGAGGTTTTGGGTATTTCCTTGGCAGCGTTTTCTATT
GCACTCCCCTACTTGGGAAAGTTTCTTAAGGGTGCAGTTCCATCTGGCGAAGCTGCCCTCCCTGAAGATGCTGAGCAAATATTTGTCTTGTCACAAAATGTATCCGATAA
TGTGAAAGAAGACTTGGCTTGGGCAACGTACATCTCACTGCGCAATACAAACAGTATATCTGTGTTAATACAGATTCAAGGGGAATTGTGTGTTCGAGGATACTGGAATA
GTCCAAATGATATATCAGGAGCAAATTTACTTGCCTGGTTTAAGGAACAGCTTCAGAGCATTGGGCTGTCTGCATTAAATAACGTCCTCTATTTTCCTCAGATTTCAGAA
TCTGAACTTTGGCAAATGCTGCCCAAGGGCACTCGCTCAGTTTTGGTACAGCCGGTGGTGCAAAATCCAACGCAAACTGCCAATGAGATGGAAAATATTGGAGGATTCAT
ATTGCTAGCTTCAAGTCTAAGTTATGCATTTAGCGAAAAAGATAGAGCCTGGATAAGGGCTCTTGCTAGCAAGTTTGATGATAAGGACATCTTCTGA

mRNA sequence

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Protein sequence

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MIMILSPNPLIRLAPTPQFRAKIRSKTHPISARLDDSKNSPNHQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSSAPITPAQLRTEVLGISLAAFSI
ALPYLGKFLKGAVPSGEAALPEDAEQIFVLSQNVSDNVKEDLAWATYISLRNTNSISVLIQIQGELCVRGYWNSPNDISGANLLAWFKEQLQSIGLSALNNVLYFPQISE
SELWQMLPKGTRSVLVQPVVQNPTQTANEMENIGGFILLASSLSYAFSEKDRAWIRALASKFDDKDIF

Sed0015226 (gene) of Chayote v1 genome